Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09] 804 sequences; 36,704,944 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq12 466 3e-126 >seq12 Length=176190 Score = 466 bits (516), Expect = 3e-126 Identities = 1249/1888 (66%), Gaps = 61/1888 (3%) Strand=Plus/Minus Query 243737 ACGCTGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTG 243796 ||| ||||||||| ||| | | || |||| ||| | |||||||||||||| |||||| Sbjct 141323 ACGGTGAACTGGATAGGTTGGGCTGCAGCCTGGGTGCGGAGGTAGTACATGCCCGTCTTG 141264 Query 243797 AGTCC--ACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTG 243854 || || ||| |||| || || ||||||| || | ||| ||| Sbjct 141263 AGACCCAACTT--CCAGCCGGTGAAGTGCATGCTGGTGATCTTGCCCAT----------- 141217 Query 243855 GGTCGTCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCT 243914 ||||| || | || || |||||| |||||| |||||||| ||||| | || | Sbjct 141216 GGTCGGT-TCACGCATGTGGATGTTGAGCGACTGGGACTGGTCGATGAAGGCTCCACGGT 141158 Query 243915 CTGCGGCCATGGTGATGA-GGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGC 243973 | || ||||| || || ||| | ||| || || || | | |||||||||| | | Sbjct 141157 CGGCCGCCATCTGGACGACGGTACG-CTGTGAAATTTCCCAGACTGTCTTGTAGAGTGCC 141099 Query 243974 TTGAGGTGCTCGGGGAACCCTTCG--ATGTTCTGCACCGAGCCCTTGTGGACGATGAGCT 244031 |||| | | |||| || | |||||||| | ||| || | | |||||| Sbjct 141098 TTGATATCGGCTGGGATG--TTGGGAATGTTCTGAATCGAACCGCCTTCGGCGATGATGC 141041 Query 244032 GGGTGCGCATGTTATCGTTCCACAGGCCCA-AGCGCTCCAGCGCCTCGACCAGGTGCCTG 244090 | | |||||| || |||||| |||| | || | || ||| ||| ||| | Sbjct 141040 GATTCTTCATGTTGTCCGACCACAGACCCATATCGA-CGAGGTCCTT---CAGAAGCCAG 140985 Query 244091 ---TTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGC 244147 || || || || ||||| || | ||||| || |||||||| | ||| || Sbjct 140984 GGGTTGACGACTTGGAACTCGCCGGCAAGCACACGTCGCTGGTAAATATTGGACGTGTAA 140925 Query 244148 GGCTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGAC 244207 ||||||| || || ||||||||| ||||||| ||| |||||||||||||| | Sbjct 140924 GGCTCGAAGCATTCGTTGTTGCCCAAGATCTGCGAGGTGGAGGCAGTCGGCATGGGAGCG 140865 Query 244208 ACCAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCC 244267 | |||||||||||||| ||||| ||| || ||| | |||| ||| ||| ||| Sbjct 140864 AGCAGCAGACTGTTCCGGACGCCATGCTCCTTGATCTTGGCCTTGAGAGCGTCCCAATCC 140805 Query 244268 CACATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTG 244327 |||| || | ||| | |||| | ||||||||| |||| || | |||| | Sbjct 140804 CACAGGCTGG--------TCG-GCTTGACGTTCCACATGTCGTACTGGAGGATACCCTGG 140754 Query 244328 CTGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACA-GCT 244386 ||| || || ||||| |||||||| || || | || ||| || | || | Sbjct 140753 GAGACAGGAGATCCTTCGTATGTCGGGTACGGGCCTTGCTCCTTGGCGAGGTCGCACGAA 140694 Query 244387 CTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTT 244446 |||| | | || | | ||||||||| ||||||||| |||||||| || ||||||| Sbjct 140693 GCCGTCAACGCCG-CATGGTAGATGGTTTCGAAGATCTGCTTGTTCAGCTCACGGGCCTC 140635 Query 244447 GCCGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGAT 244506 | | ||| || || | | | || |||| | || || || ||||| ||||||| Sbjct 140634 GGGAGACTCGAAAGGCATCCGGAGCGCCAAGAAGGCATCCGCGAGACCCTGAACGCCGAC 140575 Query 244507 GCCGATGGGTCTGTGTCGCTTGTTGG-AGCGCATGGCTTCGGGCACGGGGTAAAAGTTGC 244565 ||||||||| | ||| ||| ||||| | | | | || | | || ||||| |||| Sbjct 140574 GCCGATGGGGCGGTGGCGCGTGTTGCTATTGAAAGCCTCCTTG-ACCGGGTAGTGGTTGA 140516 Query 244566 CGTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAA 244625 ||||||| | |||||| || |||||| || || | ||| || |||| ||| | Sbjct 140515 CGTCGATGATCTTGTTCAGATTGCGGACGACCACCTGAGTGACCTCATGCAGCTTCTGGA 140456 Query 244626 AGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGC 244685 | ||||| | | | ||| | || |||| || |||| || || | | Sbjct 140455 AATCGTAGAC------ACCTTCG----TTGTAATCC--ACGAACTGAGGAAGTGCCAAGG 140408 Query 244686 TGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGA 244745 ||||| |||||||||||| ||||| || | | ||||| || || || ||||||| Sbjct 140407 AGGCCAAGTTGCAGACGGCAACCTCATCGGGAGCAGAGTACTCGATGATTTCAGTGCAGA 140348 Query 244746 GGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCT 244805 |||| || || |||||||||| || || ||| ||| |||||| |||| Sbjct 140347 GGTTGGAGCTGCGAATTGTGCCCAGGTTCTTCTGGTTGCTCTTCCGGTTGCAATGATCCT 140288 Query 244806 TGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGT 244865 |||||||||||||||| || |||||| ||| || |||||| | | ||| || | Sbjct 140287 TGTAGAGCATGAAGGGGTTGCCAGTCTCGGTCTGAGCCTCGAGGATGGCATACCATAGCT 140228 Query 244866 CCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCT 244925 | |||||||||||| |||| | | |||| |||||| ||| || |||| Sbjct 140227 TCTGGGCCTTGACCGTCTTGCGTCCGCGGTCCTCCTTCTCGTACTTCTCGTATAGAGCCT 140168 Query 244926 CGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCC 244985 | ||||| ||| || ||| | || ||||||||| ||||||||||| ||| Sbjct 140167 CAAACTCTTCGCCGTAGCAGTCGGCGAGACCGGGGCACTCATTGGGGCACATGAGCGTCC 140108 Query 244986 ACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGA 245045 |||| ||| | || || | || |||||| || || |||||||| | || |||||| Sbjct 140107 ACTCCCCGTTCTTCTCAACGCGCTTCATGAAAAGATCCGGGATCCACAAAGCAAGGAAGA 140048 Query 245046 GGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGA 245105 |||| | | | | ||| ||| || |||||||| || |||| ||| || |||| Sbjct 140047 GGTCGCGAGCACGCACCTCTTCCTTACCGTGGTTCTTCCGGAGGTCCAGAAACTCGAAGA 139988 Query 245106 CGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCT 245165 | ||| | ||||| ||||| | || | || | ||||||||| ||||||||||| |||| Sbjct 139987 CATCGGCATGCCAAGGCTCAAGATATATGGCAAAGGCGCCGGGACGCTTGTTGCCGCCCT 139928 Query 245166 GGTCCACCATCCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGT 245225 |||| || ||| | |||||||| |||||| | || | |||||||| ||| Sbjct 139927 GGTCGACGTACCTGGCCGTATTGTTGAAGACGCGCAGCATGGGAATGATGCCGTTGGAGG 139868 Query 245226 GGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCTA 245285 ||||| ||||| |||||||| ||| || | | || | | |||| || ||| | Sbjct 139867 TACCGTTTGTGCCGGCGATGTAGGAGCCGGTGGCACGGATGCGGTGGATGTTCAGGCCAA 139808 Query 245286 GTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCA 245345 |||||||| ||||||||| | |||||| |||||| ||||| |||||||| | Sbjct 139807 TGCCGCCGGCCATCTTGGAGATCATGGCGCAAGTCTTGAGCGTGTCGTAGATGCCCTCGA 139748 Query 245346 TGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACG 245405 ||||||| |||||||| || ||| |||||||| || ||||||| || ||| | | | Sbjct 139747 TGCTGTCATCCTTCATGTCGACCAGGAAGCAGGACGAGAGCTGGGCCTGGGGTGTACCGG 139688 Query 245406 AGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGGAACCCGTACGTCT 245465 |||||| || || || ||||| || ||| | |||||| | || ||| |||| Sbjct 139687 CGTTGAAGAGGGTCGGCGAAGCGTGTGTGAAGAACTTGCTCGACATGAGGTTGTATGTCT 139628 Query 245466 GGAGCAGAGCGTCGATGTTGTCGCCGTGGATCTGCAGGGCGCACCTCATGAGGGTGTGCT 245525 | | |||| |||||| || ||| | ||| | ||||| |||||| Sbjct 139627 CAATGACTCGCTCGACGTTGTCTCCCCAGATGCCGACGGCAACGCGCATGATCATGTGCT 139568 Query 245526 G-GGGCG-TC-TCGATGGGTCCCTCGGGTCCCTTGAGCATGTAGGAGCGCTCGAGCGTCT 245582 | || || || |||| || ||| | ||| || | || || ||||| ||||||| Sbjct 139567 GTGGACGCTCGACGATCTTGCCATCGAG---CTTCAGGAGATACGACCGCTCAAGCGTCT 139511 Query 245583 TGAACCCAAAGTACGAGTAGCCAAAGTC 245610 |||| ||||||||| |||| ||||| Sbjct 139510 TGAAGCCAAAGTACTGGTAGTTGAAGTC 139483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944329709391040