Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09]
804 sequences; 36,704,944 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq32 145 8e-30
seq177 125 8e-24
seq20 93.3 5e-14
>seq32
Length=147543
Score = 145 bits (160), Expect = 8e-30
Identities = 166/218 (76%), Gaps = 4/218 (2%)
Strand=Plus/Minus
Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052
||||| |||||| |||| |||||||||||| || |||||||| |||| ||||||||| |
Sbjct 71449 ACGCAGCACCAAGTGCAGTGTGCTCTCCTTCTGGATATTGTAGTCAGACAGAGTCCGACC 71390
Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112
|| || | |||||| || ||||| ||||| |||||||| || | || | || ||||||
Sbjct 71389 ATCCTCCAACTGCTTGCCCGCGAAGATGAGACGCTGCTGATCAGGCGGGATGCCCTCCTT 71330
Query 42113 GTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTG 42170
|||| ||| | || | |||| ||| | | | ||||| |||||||| |||| |||
Sbjct 71329 GTCC-TGAATCTTGGACTTGA-CGTTGTCAATTGTGTCCGAAGATTCCACCTCGAGCGTA 71272
Query 42171 ATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| || || || || |||||||| || || || |||||
Sbjct 71271 ATCGTCTTTCCTGTGAGCGTCTTGACGAAAATCTGCAT 71234
Score = 129 bits (142), Expect = 6e-25
Identities = 156/210 (74%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059
||||| |||| ||||||||||| || || ||||| || | ||| ||||| |||| ||
Sbjct 71214 ACCAAGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGTCCGACCGTCCTCC 71155
Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119
| |||||| || ||||| ||||| ||||| || || | || | || |||||||||| |
Sbjct 71154 AACTGCTTGCCCGCGAAGATGAGACGCTGTTGATCAGGCGGGATGCCCTCCTTGTCCTGG 71095
Query 42120 ATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 42178
|| ||| ||||| ||| | | | ||||| || ||||| || | |||||| || ||
Sbjct 71094 ATCTTTGATTTGA-CGTTGTCAATGGTGTCCGAGGACTCCACCTCCAACGTGATCGTCTT 71036
Query 42179 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
||| || || ||||| || || ||||||||
Sbjct 71035 GCCAGTCAGAGTCTTGACGAAAATTTGCAT 71006
Score = 82.4 bits (90), Expect = 8e-11
Identities = 121/169 (72%), Gaps = 2/169 (1%)
Strand=Plus/Minus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| || ||||||||||| | || || || | || || |||||||| || |||||
Sbjct 70969 CTCCTTCTGGATATTGTAATCCGAGAGGGTACGACCATCCTCGAGCTGCTTGCCCGCGAA 70910
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135
|| || ||||||||||| | || | | |||||| ||| ||| | || | ||||
Sbjct 70909 AATCAGGCGCTGCTGGTCAGGCGGAATACCCTCCTTATCC-TGAATCTTCGACTTGACAT 70851
Query 42136 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 42184
| | | || ||| ||||||||| |||| |||||||| || || ||
Sbjct 70850 TATCGATGGTATCGGACGATTCCACCTCGAGGGTGATGGTCTTTCCGGT 70802
>seq177
Length=70791
Score = 125 bits (138), Expect = 8e-24
Identities = 146/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 42012 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 42071
||||||||||| || || || || || | |||||||| | || || |||||||| ||
Sbjct 29419 GTGCTCTCCTTCTGGATGTTATAGTCGGAGAGAGTCCGGCCATCCTCGAGCTGCTTGCCG 29478
Query 42072 GCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTG 42131
|| || || || ||||||||||||| || | || |||||||||| ||| || |||
Sbjct 29479 GCAAAGATTAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTAGACTTG 29538
Query 42132 AGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTC 42191
| | | | ||||||||||| ||||| || | ||||| || |||||||| || |||
Sbjct 29539 ACATTGTCGATGGTGTCGCTCGACTCCACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTC 29598
Query 42192 TTTACAAAGATTTGCAT 42208
|| || ||||| |||||
Sbjct 29599 TTCACGAAGATCTGCAT 29615
>seq20
Length=161045
Score = 93.3 bits (102), Expect = 5e-14
Identities = 134/189 (71%), Gaps = 0/189 (0%)
Strand=Plus/Plus
Query 42019 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 42078
|||||||||| ||||| |||| || || || |||| || |||||||| || || || |
Sbjct 65467 CCTTTTGAATGTTGTAGTCAGAGAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCAAAGA 65526
Query 42079 TGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 42138
| || ||||||||||| | || | || |||||||||| ||| || |||| |
Sbjct 65527 TCAGGCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGT 65586
Query 42139 CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAA 42198
| | || || || || || |||| ||||| || || ||||| || ||||| || |
Sbjct 65587 CGATGGTATCCGAGGACTCGACCTCGAGGGTGATAGTCTTACCCGTGAGGGTCTTCACGA 65646
Query 42199 AGATTTGCA 42207
|||| ||||
Sbjct 65647 AGATCTGCA 65655
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543207340711360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |