Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09] 804 sequences; 36,704,944 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq32 96.9 3e-15 seq20 91.5 1e-13 >seq32 Length=147543 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || ||||| | |||||| || || || || |||||||| | || ||| || | || Sbjct 70990 AAGGACGAGATGGAGCGTCGACTCCTTCTGGATATTGTAATCCGAGAGGGTACGACCATC 70931 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 || ||||||||||| || |||| || ||||||||||| || ||||| || || || || Sbjct 70930 CTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCAGGCGGAATACCCTCCTTATC 70871 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || || || ||| ||| || | ||||| | ||||| || | || | ||| Sbjct 70870 CTGAATCTTCGACTTGACATTATCGATGGTATCGGACGATTCCACCTCGAGGGTGATGGT 70811 Query 64411 CTTGCCGGTCA 64421 ||| ||||||| Sbjct 70810 CTTTCCGGTCA 70800 >seq20 Length=161045 Score = 91.5 bits (100), Expect = 1e-13 Identities = 136/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 64256 TTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATG 64315 |||||||||||||| || | || ||| || |||| || ||||||||||||||| | || Sbjct 65469 TTTTGAATGTTGTAGTCAGAGAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATC 65528 Query 64316 AGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCC 64375 || ||||||||||| || || || || || || || || || || ||| ||| || Sbjct 65529 AGGCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCG 65588 Query 64376 ACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAA 64435 | ||||| || || || || | || | ||||| || || | || || ||||| Sbjct 65589 ATGGTATCCGAGGACTCGACCTCGAGGGTGATAGTCTTACCCGTGAGGGTCTTCACGAAG 65648 Query 64436 ATTTGCATTTTAA 64448 || |||| | ||| Sbjct 65649 ATCTGCACTATAA 65661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499639778569760