Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09] 804 sequences; 36,704,944 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq12 282 4e-71 seq32 109 5e-19 seq177 100 3e-16 seq20 93.3 4e-14 >seq12 Length=176190 Score = 282 bits (312), Expect = 4e-71 Identities = 1008/1553 (65%), Gaps = 51/1553 (3%) Strand=Plus/Minus Query 153028 GGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAAG 153087 ||||||| ||||| |||||||| || | ||| |||| | || | |||| ||| ||| Sbjct 140983 GGTTGACGACTTGGAACTCGCCGGCAAGCACACGTCGCTGGTAAATATTGGACGTGTAAG 140924 Query 153088 GTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCCA 153147 | || ||| ||||||| ||||| | || || | |||| || ||||||||| || | Sbjct 140923 GCTCGAAGCATTCGTTGTTGCCCAAGATCTGCGAGGTGGAGGCAGTCGGCATGGGAGCGA 140864 Query 153148 CCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAACGCCTGCCAATCCC 153207 || || | ||||| | ||| ||| | || | | |||| | || | |||||||| Sbjct 140863 GCAGCAGACTGTTCCGGACGCCATGCTCCTTGATCTTGGCCTTGAGAGCGTCCCAATCCC 140804 Query 153208 ACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCTCGACTGGCGGGAC 153267 |||| | ||| | ||||||||||||||||||| | | || | | | ||| Sbjct 140803 ACAGGCTGGTCGGCTTGACGTTCCACATGTCGTACTGGAGGATACCCTGGGAGACAGGAG 140744 Query 153268 TGCCGGCAAACGTACTGTAGCTGCCGT-CGCGTTGGGCCAGTTCGCAGCTAGCCTCGAGC 153326 || | | || ||| ||| | | | |||| | || ||||| |||| | | Sbjct 140743 ATCCTTCGTATGTCGGGTACGGGCCTTGCTCCTTGG-CGAGGTCGCACGAAGCCGTCAAC 140685 Query 153327 GCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGA--ACGGCCGCTTCTTCGCTCT 153384 || ||| ||| ||||||||| ||| || || || || |||| || || || Sbjct 140684 GCCGCATGGTAGATGGTTTCGAAGATCTGCTTGTTCAGCTCACGG--GCCTCGGGAGACT 140627 Query 153385 CGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGATGG 153444 || | ||||| || ||| || ||||| || || |||||||| | ||||||||||||| Sbjct 140626 CGAAAGGCATCCGGAGCGCCAAGAAGGCATCCGCGAGACCCTGAACGCCGACGCCGATGG 140567 Query 153445 GTCGATGCTTCTCGTTGCTGC-----GCCTCGCGCTCGCTATGGGATAGTGATTGCGATC 153499 | || || | |||||| ||||| || | | || ||||| ||| || Sbjct 140566 GGCGGTGGCGCGTGTTGCTATTGAAAGCCTC---CTTG--ACCGGGTAGTGGTTGACGTC 140512 Query 153500 GATAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATC 153559 ||| || ||||| || ||||| || ||||| | ||| | | | | || |||| |||||| Sbjct 140511 GATGATCTTGTTCAGATTGCGGACGACCACCTGAGTGACCTCATGCAGCTTCTGGAAATC 140452 Query 153560 ATAGGTCATTTCGTCGACGCGTACGCATCGATTCACGGCAATAGACGCCAGATTACAGAC 153619 ||| ||||| | ||| | || | || | || |||| || ||||| Sbjct 140451 GTAGACACCTTCGTTGTAATCCACGAACTGAGGAAGTGCCAAGGAGGCCAAGTTGCAGAC 140392 Query 153620 GGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTTG---CTGCATTT 153676 ||| ||| |||| | ||||| | ||| || | |||||||||| |||| | Sbjct 140391 GGCAACCTCATCGGGAGCAGAGTACTCGATGATTTCAGTGCAGAGGTTGGAGCTGCGAAT 140332 Query 153677 TATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTA 153736 | || |||| || | ||| ||||| || || ||||| || ||| |||||||| | Sbjct 140331 TGTG---CCCAGGTTCTTCTGGTTGCTCTTCCGGTTGCAATGATCCTTGTAGAGCATGAA 140275 Query 153737 CGGTCCGCCGGTCTCGACTTGCGTTTCGACGAT---AAACCTATGCAGGTCCTGCGCTCG 153793 || ||| |||||| || | |||| ||| | ||| || || | ||| || Sbjct 140274 GGGGTTGCCAGTCTCGGTCTGAGCCTCGAGGATGGCATACC-AT--AGCTTCTGGGCCTT 140218 Query 153794 CACCCGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAAACTCGTC 153853 ||| || || |||| |||| ||||||| |||||| || ||||||||| || Sbjct 140217 GACCGTCTTGCGTCCGCGGTCCTCCTTCTCGTACTTCTCGTATAGAGCCTCAAACTCTTC 140158 Query 153854 GCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACCACATATCGTC 153913 |||||||||||||||||| ||||| |||| || || ||||| |||| |||| ||| Sbjct 140157 GCCGTAGCAGTCGGCGAGACCGGGGCACTCATTGGGGCACATGAGCGTCCACTCCCCGTT 140098 Query 153914 GGCGTTGACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGAGGTCGCGCGC 153973 | ||||| |||||| |||||||| | ||| | || | ||||||||| | Sbjct 140097 CTTCTCAACGCGCTTCATGAAAAGATCCGGGATCCACAAAGCAAGGAAGAGGTCGCGAG- 140039 Query 153974 CTTGCAATCCTCCGCGCCCATGTTGCGTTTC--AGATTGAG-CACGCTATAGATGTCGGC 154030 | ||| || | || || | | || | || | || || | | ||| ||||| Sbjct 140038 CACGCACCTCTTCCTTACCGTGGTTC-TTCCGGAGGTCCAGAAACTCGA-AGACATCGGC 139981 Query 154031 GTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGC---TTTCCGCCCTGATCGAC 154087 ||||| || |||| || | ||| | ||| || |||| || |||||||| ||||| Sbjct 139980 ATGCCAAGGCTCAAGATATATGGCAAAGGCGCCGGGACGCTTGTTGCCGCCCTGGTCGAC 139921 Query 154088 GTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTGCGGTGCCGTT 154147 || | || |||||||||||||||||| |||||| | |||| | | ||| ||||| Sbjct 139920 GTACCTGGCCGTATTGTTGAAGACGCGCAGCATGGGAATGATGCCGTTGGAGGTACCGTT 139861 Query 154148 GGTCGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGTTAACGCCAATGCCGCC 154207 || ||| | | |||| ||| || | | || | ||| | |||||||||||| Sbjct 139860 TGTGCCGGCGATGTAGGAGCCGGTGGCACGGATGCGGTGGATGTTCAGGCCAATGCCGCC 139801 Query 154208 GCCGTACTTTGATATGGCAGCGC-AGTCGCCCAGCGTCCTGTAGATGCCGTCGATGCTAT 154266 | | ||| || || |||| |||| ||||| ||||||||| |||||||| | Sbjct 139800 GGCCATCTTGGAGATCATGGCGCAAGTC-TTGAGCGTGTCGTAGATGCCCTCGATGCTGT 139742 Query 154267 CGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGAATGCGCGTTCCCGCCGAAA 154326 | || | | ||| || ||| || || | | || | | | || || || | Sbjct 139741 CATCCTTCATGTCGACCAGGAAGCAGGACGAGAGCTGGGCCTGGGGTGTACCGGCGTTGA 139682 Query 154327 AGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATCATGCG---GTACGTTTCGA 154383 ||||||| || ||||| || || | || |||| |||| | ||| || || | Sbjct 139681 AGAGGGTCGGCGAAGCGTGTGTGAAGAACTT---GCTCGACATGAGGTTGTATGTCTCAA 139625 Query 154384 TGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGCATGAGCATGTGCTGCG 154443 || | |||| | || || ||||||| || |||||||||| ||||||||| | Sbjct 139624 TGACTCGCTCGACGTTGTCTCCCCAGATGCCGACGGCAACGCGCATGATCATGTGCTGTG 139565 Query 154444 GACGTTCGGCGACTCTATTG---TCAATCTTCAAGAGATATCCATTTTCGAGGGTTTTGT 154500 |||| ||| ||| | ||| || | ||||| |||||| || || || ||| Sbjct 139564 GACGCTCGACGA---TCTTGCCATCGAGCTTCAGGAGATACGACCGCTCAAGCGTCTTGA 139508 Query 154501 AACCGAAATACTTGTATTCAAAATCTAGCTCATGAGCGATGGCCGCATCGAGC 154553 | || || |||| ||| | || || | |||| ||||||||| |||||| Sbjct 139507 AGCCAAAGTACTGGTAGTTGAAGTCCCGATCATATACGATGGCCGAGTCGAGC 139455 >seq32 Length=147543 Score = 109 bits (120), Expect = 5e-19 Identities = 140/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || |||||||||||| || || || |||||| | || || || | | Sbjct 71197 CTCCTTCTGGATGTTGTAGTCGGACAGGGTCCGACCGTCCTCCAACTGCTTGCCCGCGAA 71138 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTG 138542 ||| ||||||||||| || || || || || || ||||| ||| ||| ||| | | Sbjct 71137 GATGAGACGCTGTTGATCAGGCGGGATGCCCTCCTTGTCCTGGATCTTTGATTTGACGTT 71078 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | |||||| | ||||||||||| | ||| | ||| || ||||||||||| || || Sbjct 71077 GTCAATGGTGTCCGAGGACTCCACCTCCAACGTGATCGTCTTGCCAGTCAGAGTCTTGAC 71018 Query 138603 AAAAATCTGCATG 138615 ||||| |||||| Sbjct 71017 GAAAATTTGCATG 71005 >seq177 Length=70791 Score = 100 bits (110), Expect = 3e-16 Identities = 140/194 (72%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || ||||| |||||| | ||| || |||||||| || || |||| | | Sbjct 29424 CTCCTTCTGGATGTTATAGTCGGAGAGAGTCCGGCCATCCTCGAGCTGCTTGCCGGCAAA 29483 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATT 138541 |||||| ||||| ||||| || || || || || ||||| ||| || || | ||| Sbjct 29484 GATTAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTAGACTTGACATT 29543 Query 138542 GTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTA 138601 || | | ||||||| ||||||||||||| | || | || || || || || || || | Sbjct 29544 GT-CGATGGTGTCGCTCGACTCCACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTCA 29602 Query 138602 CAAAAATCTGCATG 138615 | || ||||||||| Sbjct 29603 CGAAGATCTGCATG 29616 >seq20 Length=161045 Score = 93.3 bits (102), Expect = 4e-14 Identities = 136/190 (72%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 ||||||||||||||||||| | ||||| ||||||||| || || |||| | ||| Sbjct 65467 CCTTTTGAATGTTGTAGTCAGAGAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCAAAGA 65526 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGT 138543 | || ||||| ||||| || || || || || ||||| ||| || || | |||| Sbjct 65527 TCAGGCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTG- 65585 Query 138544 TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACA 138603 || | ||| || | ||||| ||||||| || | || ||||| || || || || || Sbjct 65586 TCGATGGTATCCGAGGACTCGACCTCGAGGGTGATAGTCTTACCCGTGAGGGTCTTCACG 65645 Query 138604 AAAATCTGCA 138613 || ||||||| Sbjct 65646 AAGATCTGCA 65655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496257412562880