Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09]
804 sequences; 36,704,944 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq32 102 8e-17
seq20 89.7 5e-13
seq177 86.0 6e-12
>seq32
Length=147543
Score = 102 bits (112), Expect = 8e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | |||| |||||| || | || ||| || || |||||||| || |
Sbjct 71460 CCACCACGGAGACGCAGCACCAAGTGCAGTGTGCTCTCCTTCTGGATATTGTAGTCAGAC 71401
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| || ||| ||| || | ||| || || ||| |||| | ||||||||||| || ||
Sbjct 71400 AGAGTCCGACCATCCTCCAACTGCTTGCCCGCGAAGATGAGACGCTGCTGATCAGGCGGG 71341
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065
||||||||||||||| || || ||||| ||||| | | ||||||| | || ||
Sbjct 71340 ATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGT-CAATTGTGTCCGAAGATTCCAC 71282
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|||| || | ||| || || || || || || || |||||||||||
Sbjct 71281 CTCGAGCGTAATCGTCTTTCCTGTGAGCGTCTTGACGAAAATCTGCAT 71234
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/194 (72%), Gaps = 2/194 (1%)
Strand=Plus/Minus
Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981
||| || || || ||||| ||| || || ||| || || | ||| || || ||| |
Sbjct 71197 CTCCTTCTGGATGTTGTAGTCGGACAGGGTCCGACCGTCCTCCAACTGCTTGCCCGCGAA 71138
Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTT 127040
||| | ||||| ||||| || || ||||||||||||||| ||| || |||| |||
Sbjct 71137 GATGAGACGCTGTTGATCAGGCGGGATGCCCTCCTTGTCCTGGATCTTTGATTTGACGTT 71078
Query 127041 GTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTA 127100
| || | |||||||| ||| || || | || | ||| ||||| |||||||| || |
Sbjct 71077 G-TCAATGGTGTCCGAGGACTCCACCTCCAACGTGATCGTCTTGCCAGTCAGAGTCTTGA 71019
Query 127101 CAAAAATCTGCATG 127114
| ||||| ||||||
Sbjct 71018 CGAAAATTTGCATG 71005
>seq20
Length=161045
Score = 89.7 bits (98), Expect = 5e-13
Identities = 132/187 (71%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985
|||||||| ||||| || | || || || || ||||| || || || |||||
Sbjct 65469 TTTTGAATGTTGTAGTCAGAGAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATC 65528
Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCG 127045
| |||||||| || || || ||||||||||||||| ||| ||| ||||| | |||
Sbjct 65529 AGGCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCG 65588
Query 127046 ACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 127105
| ||| |||| |||||| |||| ||| | || || || || || || || || ||
Sbjct 65589 ATGGTATCCGAGGACTCGACCTCGAGGGTGATAGTCTTACCCGTGAGGGTCTTCACGAAG 65648
Query 127106 ATCTGCA 127112
|||||||
Sbjct 65649 ATCTGCA 65655
>seq177
Length=70791
Score = 86.0 bits (94), Expect = 6e-12
Identities = 113/157 (72%), Gaps = 0/157 (0%)
Strand=Plus/Plus
Query 126958 ATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTT 127017
||| || ||||| || || || |||| | |||||||| ||||| || |||||||||||
Sbjct 29460 ATCCTCGAGCTGCTTGCCGGCAAAGATTAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTT 29519
Query 127018 GTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077
|||| ||| || ||||| | |||| |||||| | ||| || || | ||| |
Sbjct 29520 GTCCTGGATCTTAGACTTGACATTGTCGATGGTGTCGCTCGACTCCACCTCAAGGGTGAT 29579
Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114
|| ||||| || || || || || || |||||||||
Sbjct 29580 AGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCATG 29616
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475496021216960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |