Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09] 804 sequences; 36,704,944 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq12 87.8 2e-12 seq32 82.4 7e-11 >seq12 Length=176190 Score = 87.8 bits (96), Expect = 2e-12 Identities = 154/222 (69%), Gaps = 8/222 (4%) Strand=Plus/Plus Query 124098 GGTATTTTGCAGTACGACATGTGGAATGCTACACCGACAAATTTGTGGGACTGGAGCGTT 124157 ||||| | ||||||||||||||||| | | ||||| | ||||||| ||| || | Sbjct 140758 GGTATCCTCCAGTACGACATGTGGAACGTCAAGCCGACCAGCCTGTGGGATTGGGACGCT 140817 Query 124158 TTAAAACAACGC--ATATC--GACGCACGGTTTGCGTAACTCGCTGTTGGTGGCGTACAT 124213 | ||| || | ||| | ||| || | || ||| ||| || | || ||| Sbjct 140818 CT----CAAGGCCAAGATCAAGGAGCATGGCGTCCGGAACAGTCTGCTGCTCGCTCCCAT 140873 Query 124214 GCCGACGGCAACCACTGCTCAAATTTTAGGAAACAACGAATCCTTCGAGCCGTTCACTAA 124273 |||||| || |||| | || || || || |||||||||| ||||||||| | ||| Sbjct 140874 GCCGACTGCCTCCACCTCGCAGATCTTGGGCAACAACGAATGCTTCGAGCCTTACACGTC 140933 Query 124274 CAATTTGTACGTGCGACGAGTGTTAGCCGGCGATTTTCAAGT 124315 |||| | ||| |||||| ||| | |||||||| || ||||| Sbjct 140934 CAATATTTACCAGCGACGTGTGCTTGCCGGCGAGTTCCAAGT 140975 >seq32 Length=147543 Score = 82.4 bits (90), Expect = 7e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 45150 TCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTAT 45209 ||||| ||||| || || ||| | ||| | || ||||| || || || ||| | Sbjct 71196 TCCTTCTGGATGTTGTAGTCGGACAGGGTCCGACCGTCCTCCAACTGCTTGCCCGCGAAG 71137 Query 45210 ATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT 45269 || | || || || || ||||| ||||| || || || || || ||| ||||| || | Sbjct 71136 ATGAGACGCTGTTGATCAGGCGGGATGCCCTCCTTGTCCTGGATCTTTGATTTGA-CGTT 71078 Query 45270 -TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTAC 45328 || | |||||| || ||||| || || | || | ||| ||||| || ||||| || || Sbjct 71077 GTCAATGGTGTCCGAGGACTCCACCTCCAACGTGATCGTCTTGCCAGTCAGAGTCTTGAC 71018 Query 45329 AAAAATTTGCAT 45340 ||||||||||| Sbjct 71017 GAAAATTTGCAT 71006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451998657367840