Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09] 804 sequences; 36,704,944 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq12 123 4e-23 >seq12 Length=176190 Score = 123 bits (136), Expect = 4e-23 Identities = 414/636 (65%), Gaps = 14/636 (2%) Strand=Plus/Minus Query 203885 AGATAGTACATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGT 203944 || ||||||||||| ||||| || ||| || ||| ||| | ||||||| | | Sbjct 141284 AGGTAGTACATGCCCGTCTTGAGACCCAACTTCCAGCCGGTGAAGTGCATGCTGGTGATC 141225 Query 203945 TTGCTCACGTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGC 204004 |||| || | | || || |||||| ||||| || |||||| ||||||||||| ||| Sbjct 141224 TTGCCCATGGTCGGTTCACGCATGTGGATGTTGAGCGACTGGGACTGGTCGATGAA-GGC 141166 Query 204005 GCC-CGATCTGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAA 204063 || || || || ||||| | || | ||| ||| ||||| ||||| || |||||| | Sbjct 141165 TCCACGGTCGGCCGCCATCTGGACGACGGTACGCTGTGAAATTTCCCAGACTGTCTTGTA 141106 Query 204064 CACGTCTCTGGTGT--GTTGAGGCACATCTTCCCAC-GTCCTGA-TCGAGCCGTTGTCGG 204119 | | || | | | || | || || | || |||| |||| ||| |||| Sbjct 141105 GAGTGCCTTGATATCGGCTGGG----ATGTTGGGAATGTTCTGAATCGAACCGCCTTCGG 141050 Query 204120 CCATCAGTCTCATCCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCA 204179 | || | | || || | | ||| ||||| |||| || || ||| || | Sbjct 141049 CGATGATGCGATTCTTCATGTTGTCCGACCACAGACCCATATCGACGAGGTCCTTCAGAA 140990 Query 204180 GGTGGGGGTTGATGATCTGAAAGTCTCCGGACAGCACCCCTCG--GGTGAACAGGTTGTT 204237 | |||||||| || || || || |||| ||||| | ||| ||| || | ||| Sbjct 140989 GCCAGGGGTTGACGACTTGGAACTCGCCGGCAAGCACACGTCGCTGGTAAATA--TTGGA 140932 Query 204238 GGTGAATGGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCAT 204297 ||| | || ||||| ||||||||||| || ||||| | |||| ||| || ||||| Sbjct 140931 CGTGTAAGGCTCGAAGCATTCGTTGTTGCCCAAGATCTGCGAGGTGGAGGCAGTCGGCAT 140872 Query 204298 GGGAGCCAGGAGCAGGGAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGT 204357 |||||| || ||||| ||| || || || | | | || | || ||| |||| | Sbjct 140871 GGGAGCGAGCAGCAGACTGTTCCGGACGCCATGCTCCTTGATCTTGGCCTTGAGAGCGTC 140812 Query 204358 CCAGTCGTGCATCGCACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACT 204417 ||| || || | || || ||| |||||||||| |||| | ||| || || Sbjct 140811 CCAATCCCACAGGCTGGTCGGCTTGACGTTCCACATGTCGTACTGGAGGATACCCTGGGA 140752 Query 204418 GACTGGGCTGCCCTTGTACGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCACGAGGC 204477 ||| || || | ||| ||||| || || | ||| | || || | |||||| || Sbjct 140751 GACAGGAGATCCTTCGTATGTCGGGTACGGGCCTTGCTCCTTGGCGAGGTCGCACGAAGC 140692 Query 204478 GGCCATGGCGTGATAGTACATGGTCTCAAAGATCTG 204513 | || || || ||| ||||| || |||||||| Sbjct 140691 CGTCAACGCCGCATGGTAGATGGTTTCGAAGATCTG 140656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795147208690240