Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09] 804 sequences; 36,704,944 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq32 125 2e-23 seq177 116 9e-21 seq20 95.1 3e-14 >seq32 Length=147543 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | ||| ||||| |||||| |||| ||||||||| | || |||| || || Sbjct 71217 AGAACCAAGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGTCCGACCGTCC 71158 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||| |||||| || ||||||||||||||||| || || || || || || ||| Sbjct 71157 TCCAACTGCTTGCCCGCGAAGATGAGACGCTGTTGATCAGGCGGGATGCCCTCCTTGTCC 71098 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || |||||| || ||| || | |||||| | | || || ||||||||||||||| Sbjct 71097 TGGATCTTTGATTTGACGTTGTCAATGGTGTCCGAGGACTCCACCTCCAACGTGATCGTC 71038 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || ||||| || || |||||||| Sbjct 71037 TTGCCAGTCAGAGTCTTGACGAAAATTTG 71009 Score = 123 bits (136), Expect = 6e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | ||| || | ||| || || |||||| |||| |||||||||| || |||| Sbjct 71454 CGGAGACGCAGCACCAAGTGCAGTGTGCTCTCCTTCTGGATATTGTAGTCAGACAGAGTC 71395 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| |||| |||||| || |||||||||||||||||||| || || || || Sbjct 71394 CGACCATCCTCCAACTGCTTGCCCGCGAAGATGAGACGCTGCTGATCAGGCGGGATGCCC 71335 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||||||||| ||| ||| || | ||||| | | ||| || || | | Sbjct 71334 TCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATTGTGTCCGAAGATTCCACCTCGAGC 71275 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||| || ||||| || || || ||||| || Sbjct 71274 GTAATCGTCTTTCCTGTGAGCGTCTTGACGAAAATCTG 71237 Score = 96.9 bits (106), Expect = 8e-15 Identities = 134/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| || ||||| ||||||||||| |||| ||||| || | | || | ||||| Sbjct 70989 AGGACGAGATGGAGCGTCGACTCCTTCTGGATATTGTAATCCGAGAGGGTACGACCATCC 70930 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || ||||| || || ||||||||||| || ||| || || ||| Sbjct 70929 TCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCAGGCGGAATACCCTCCTTATCC 70870 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| || |||| ||| || | | ||| || || | ||||| ||| Sbjct 70869 TGAATCTTCGACTTGACATTATCGATGGTATCGGACGATTCCACCTCGAGGGTGATGGTC 70810 Query 199598 TTACCCGT 199605 || || || Sbjct 70809 TTTCCGGT 70802 >seq177 Length=70791 Score = 116 bits (128), Expect = 9e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || ||||||||||| || |||||| |||| ||| ||||| | | ||||| ||||| Sbjct 29404 AGCACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTATAGTCGGAGAGAGTCCGGCCATCC 29463 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| ||||| ||||| || ||||||||||| || || || || ||| Sbjct 29464 TCGAGCTGCTTGCCGGCAAAGATTAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCC 29523 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| || |||| |||||| | | || || || | ||||| ||| Sbjct 29524 TGGATCTTAGACTTGACATTGTCGATGGTGTCGCTCGACTCCACCTCAAGGGTGATAGTC 29583 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||| || ||||| || || || Sbjct 29584 TTGCCCGTGAGGGTCTTCACGAAGATCTG 29612 >seq20 Length=161045 Score = 95.1 bits (104), Expect = 3e-14 Identities = 133/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499 ||||||| | ||||||||||| | || | || || || |||||||| ||||| |||| Sbjct 65467 CCTTTTGAATGTTGTAGTCAGAGAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCAAAGA 65526 Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATT 199559 | || ||||||||||| || || || || ||||| ||||| ||| || | Sbjct 65527 TCAGGCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGT 65586 Query 199560 CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAA 199619 ||| ||| || | | || || || | ||||| |||||||||||||| || ||||| | Sbjct 65587 CGATGGTATCCGAGGACTCGACCTCGAGGGTGATAGTCTTACCCGTGAGGGTCTTCACGA 65646 Query 199620 AAATTTG 199626 | || || Sbjct 65647 AGATCTG 65653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178909455633868