Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09]
804 sequences; 36,704,944 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq177 158 1e-33
seq32 132 5e-26
seq20 116 4e-21
>seq177
Length=70791
Score = 158 bits (174), Expect = 1e-33
Identities = 161/210 (77%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443
||| || || | || |||||||| ||||| || |||||||| ||||| || | || ||
Sbjct 29406 CACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTATAGTCGGAGAGAGTCCGGCCATCCTC 29465
Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503
||||||||||||||| || || | |||||||||||||| ||| | || ||||||||||
Sbjct 29466 GAGCTGCTTGCCGGCAAAGATTAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTG 29525
Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563
|||||| ||||| | | | ||||||||||| ||||| || | ||||| || ||
Sbjct 29526 GATCTTAGACTTGACATTGTCGATGGTGTCGCTCGACTCCACCTCAAGGGTGATAGTCTT 29585
Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|||||| || || || || ||||| |||||
Sbjct 29586 GCCCGTGAGGGTCTTCACGAAGATCTGCAT 29615
>seq32
Length=147543
Score = 132 bits (146), Expect = 5e-26
Identities = 172/235 (73%), Gaps = 2/235 (1%)
Strand=Plus/Minus
Query 46360 TTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTA 46419
||| | ||| || | | ||||| ||||| |||| ||| |||||||| |||||||||||
Sbjct 71467 TTACTGGCCACCACGGAGACGCAGCACCAAGTGCAGTGTGCTCTCCTTCTGGATATTGTA 71408
Query 46420 GTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC 46479
||| || ||||| || | || || | ||||||||| ||||| || | |||||||| ||
Sbjct 71407 GTCAGACAGAGTCCGACCATCCTCCAACTGCTTGCCCGCGAAGATGAGACGCTGCTGATC 71348
Query 46480 GGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCG 46538
| ||| | || |||||||||| ||||| ||||| ||| | | | ||||| |
Sbjct 71347 AGGCGGGATGCCCTCCTTGTCCTGAATCTTGGACTTGA-CGTTGTCAATTGTGTCCGAAG 71289
Query 46539 ATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||||||| || | ||| || || || || || ||||| || || || || |||||
Sbjct 71288 ATTCCACCTCGAGCGTAATCGTCTTTCCTGTGAGCGTCTTGACGAAAATCTGCAT 71234
Score = 129 bits (142), Expect = 7e-25
Identities = 156/210 (74%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
|||| |||| || |||||||| ||||| ||||||||||| || || || |||| ||
Sbjct 71214 ACCAAGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGTCCGACCGTCCTCC 71155
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
| ||||||||| ||||| || | ||||| || || | ||| | || |||||||||| |
Sbjct 71154 AACTGCTTGCCCGCGAAGATGAGACGCTGTTGATCAGGCGGGATGCCCTCCTTGTCCTGG 71095
Query 46505 ATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563
||||| |||| ||| | | | ||||| || ||||| |||| |||||| || ||
Sbjct 71094 ATCTTTGATTTGA-CGTTGTCAATGGTGTCCGAGGACTCCACCTCCAACGTGATCGTCTT 71036
Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||| ||||| || || || || ||||||||
Sbjct 71035 GCCAGTCAGAGTCTTGACGAAAATTTGCAT 71006
Score = 113 bits (124), Expect = 5e-20
Identities = 127/170 (75%), Gaps = 0/170 (0%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||||||||| || || || || || | || |||||||||||||| |||||
Sbjct 70969 CTCCTTCTGGATATTGTAATCCGAGAGGGTACGACCATCCTCGAGCTGCTTGCCCGCGAA 70910
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|||| |||||||||||| | ||| | | |||||| ||| |||||| ||||| |
Sbjct 70909 AATCAGGCGCTGCTGGTCAGGCGGAATACCCTCCTTATCCTGAATCTTCGACTTGACATT 70850
Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCA 46571
| | || ||| ||||||||| || | |||||||| || || ||||
Sbjct 70849 ATCGATGGTATCGGACGATTCCACCTCGAGGGTGATGGTCTTTCCGGTCA 70800
>seq20
Length=161045
Score = 116 bits (128), Expect = 4e-21
Identities = 139/189 (74%), Gaps = 0/189 (0%)
Strand=Plus/Plus
Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463
||||||| || |||||||| || || || || |||| ||||||||||||||||| || |
Sbjct 65467 CCTTTTGAATGTTGTAGTCAGAGAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCAAAGA 65526
Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523
||| |||||||||||| | || | || |||||||||| ||||||| ||||| |
Sbjct 65527 TCAGGCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGT 65586
Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583
| | || || || || || || | ||||| || || ||||| || || || || |
Sbjct 65587 CGATGGTATCCGAGGACTCGACCTCGAGGGTGATAGTCTTACCCGTGAGGGTCTTCACGA 65646
Query 46584 AGATTTGCA 46592
|||| ||||
Sbjct 65647 AGATCTGCA 65655
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565232719354080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |