Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09]
804 sequences; 36,704,944 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq32 141 9e-29
seq20 107 2e-18
seq177 104 2e-17
>seq32
Length=147543
Score = 141 bits (156), Expect = 9e-29
Identities = 174/230 (76%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || || || ||||| || ||||| | || || ||| || |
Sbjct 71006 ATGCAAATTTTCGTCAAGACTCTGACTGGCAAGACGATCACGTTGGAGGTGGAGTCCTCG 71065
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACC 38361
|||| | | | |||| | ||| ||| |||| ||||| ||||| || |||||| || |
Sbjct 71066 GACACCATTGACAACG-TCAAATCAAAGATCCAGGACAAGGAGGGCAT-CCCGCCTGATC 71123
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
||||||| ||||| | ||||||||| ||| |||| |||| || ||||| ||||||||
Sbjct 71124 AACAGCGTCTCATCTTCGCGGGCAAGCAGTTGGAGGACGGTCGGACCCTGTCCGACTACA 71183
Query 38422 ACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||||| ||||| ||| || ||||| ||||| || ||| || | || ||
Sbjct 71184 ACATCCAGAAGGAGAGC-ACTCTGCACTTGGTTCTCCGTCTGCGTGGTGG 71232
Score = 100 bits (110), Expect = 3e-16
Identities = 166/232 (72%), Gaps = 6/232 (3%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || |||||||| || || || || || |||| || || | |
Sbjct 71234 ATGCAGATTTTCGTCAAGACGCTCACAGGAAAGACGATTACGCTCGAGGTGGAATCTTCG 71293
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACC 38361
|||| | | |||| | || || || | ||||| ||||| || |||||| || |
Sbjct 71294 GACACAATTGACAACG-TCAAGTCCAAGATTCAGGACAAGGAGGGCAT-CCCGCCTGATC 71351
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
| ||||| ||||| | ||||||||| ||| |||| || | || || || |||||||
Sbjct 71352 AGCAGCGTCTCATCTTCGCGGGCAAGCAGTTGGAGGATGGTCGGACTCTGTCTGACTACA 71411
Query 38422 ACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472
| ||||| ||||| ||| || ||||| |||||||||||| | | || ||||
Sbjct 71412 ATATCCAGAAGGAGAGC-ACACTGCACTTGGTGCTGCGTCTCCGTGGTGGCC 71462
>seq20
Length=161045
Score = 107 bits (118), Expect = 2e-18
Identities = 137/189 (72%), Gaps = 0/189 (0%)
Strand=Plus/Minus
Query 38245 TGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCG 38304
|||| || ||||| || || |||||||| || || |||||| |||| |||||| || | |
Sbjct 65655 TGCAGATCTTCGTGAAGACCCTCACGGGTAAGACTATCACCCTCGAGGTCGAGTCCTCGG 65596
Query 38305 ACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAAC 38364
| | | | | | | || || |||| ||||| ||||| || ||| | ||||| |
Sbjct 65595 ATACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCAGC 65536
Query 38365 AGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACA 38424
|||| || || | || ||||| ||||| || |||| || |||||| ||||||||||
Sbjct 65535 AGCGCCTGATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGTACCCTCTCTGACTACAACA 65476
Query 38425 TCCAAAAGG 38433
| |||||||
Sbjct 65475 TTCAAAAGG 65467
>seq177
Length=70791
Score = 104 bits (114), Expect = 2e-17
Identities = 154/216 (71%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||||||||| || |||||| | || || ||| | | |
Sbjct 29615 ATGCAGATCTTCGTGAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC 29556
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || || |||| ||||| ||||| || || |||||||
Sbjct 29555 GACACCATCGACAATGTCAAGTCTAAGATCCAGGACAAGGAGGGCATCCCGCCCGACCAG 29496
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| || || | || ||||| ||||| || || | || || ||| |||||| |||
Sbjct 29495 CAGCGCCTAATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGGACTCTCTCCGACTATAAC 29436
Query 38424 ATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCG 38458
||||| ||||| ||| || || || | ||||| ||
Sbjct 29435 ATCCAGAAGGAGAGC-ACCCTCCACCTTGTGCTCCG 29401
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500167773263360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |