Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09] 804 sequences; 36,704,944 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq12 178 2e-39 seq28 84.2 3e-11 >seq12 Length=176190 Score = 178 bits (196), Expect = 2e-39 Identities = 535/810 (66%), Gaps = 27/810 (3%) Strand=Plus/Plus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATA---TTGATTCT 111668 |||||| ||||| ||||||| || || |||| ||| |||||| || | | || Sbjct 139564 CCACAGCACATGATCATGCGCGTTGCCGTCGGCATC--TGGGGA-GACAACGTCGAGCGA 139620 Query 111669 GTTTTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTC 111728 || | ||||||||| || ||||| | | |||| ||||| | || |||||| Sbjct 139621 GTCATTGAGACATACAACCTCATGTCGAGCAAGTTCTTCACACACGCTTCGCCGACCCTC 139680 Query 111729 TTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAG 111788 |||||||| |||||||| |||| | || || ||||| | | | ||||| Sbjct 139681 TTCAACGCCGGTACACCCCAGGCCCAGCTCTCGTCCTGCTTCCTGGTCGACATGAAGGAT 139740 Query 111789 GATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCT 111848 || ||| | ||||| |||| ||| |||| || ||| ||||| ||| ||| Sbjct 139741 GACAGCATCGAGGGCATCTACGACACGCTCAAGACTTGCGCCATGATCTCCAAGATGGCC 139800 Query 111849 GGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTAT-TAGA-GGTA 111906 || || || || || ||||||| || | |||| | | ||| || | | || | Sbjct 139801 GGCGGCATTGGCCTGAACATCCACCGCATCCGTGCCACC--GGCTCCTACATCGCCGGCA 139858 Query 111907 CAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCT 111966 |||| ||| || | || || ||||| ||||| ||||| || ||| || || | | Sbjct 139859 CAAACGGTACCTCCAACGGCATCATTCCCATGCTGCGCGTCTTCAACAATACGGCCAGGT 139918 Query 111967 ATGTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCAT 112020 | || |||| | || ||||| | || | | || | ||||||||||| | Sbjct 139919 ACGTCGACCAGGGCGGCAACAAGCGTCCC---GGCGCCTTTGCCATATATCTTGAGCCTT 139975 Query 112021 GGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGC 112080 |||| || ||| || | ||||| || || | || ||||| ||| | || |||| || Sbjct 139976 GGCATGCCGATGTCTTCGAGTTTCTGGACCTCCGGAAGAACCACGGTAAGGAAGAGGTGC 140035 Query 112081 GGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAG 112139 |||| ||||| |||||| ||| | ||||| || ||||| ||||||||| | |||||| Sbjct 140036 -GTGCTCGCGACCTCTTCCTTGCTTTGTGGATCCCGGATCTTTTCATGAAGCGCGTTGAG 140094 Query 112140 GAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTG 112199 ||| || | ||| | ||| | || || | || ||||||||| |||| | Sbjct 140095 AAGAACGGGGAGTGGACGCTCATGTGCCCCAATGAGTGCCCCGGTCTCGCCGACTGCTAC 140154 Query 112200 GGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGC--GA 112257 || || |||||||| || || ||| |||||||| |||| | | | | ||| || || Sbjct 140155 GGCGAAGAGTTTGAGGCTCTATACGAGAAGTACGA-GAAGGAGGACCGCGGAC-GCAAGA 140212 Query 112258 CGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACA 112316 |||| | || | || | | ||| | || || ||| || |||| ||||||||||| | Sbjct 140213 CGGT-CAAGGCCCAGAAGCTATGGTATGCCATCCTCGAGGCTCAGACCGAGACTGGCAAC 140271 Query 112317 CCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTG 112376 || | ||||| ||||| || || |||| ||||| || || ||||| |||| Sbjct 140272 CCCTTCATGCTCTACAAGGATCATTGCAACCGGAAGAGCAACCAGAAGAACCTGGGCACA 140331 Query 112377 ATCAAGAGTTCCAACCTCTGTACAGAAATC 112406 || || ||||||||||| || |||||| Sbjct 140332 ATTCGCAGCTCCAACCTCTGCACTGAAATC 140361 Score = 114 bits (126), Expect = 2e-20 Identities = 322/489 (66%), Gaps = 14/489 (3%) Strand=Plus/Plus Query 112851 GACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATG 112910 || |||||||||||||||| ||||||||| | || | || |||||||| || | Sbjct 140806 GATTGGGACGCTCTCAAGGCCAAGATCAAGGAGCATGGCGTCCGGAACAGTCTGCTGCTC 140865 Query 112911 GCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCC 112970 || || ||||| || ||||||||| | || |||||||| || || |||||||| || || Sbjct 140866 GCTCCCATGCCGACTGCCTCCACCTCGCAGATCTTGGGCAACAACGAATGCTTCGAGCCT 140925 Query 112971 TACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAG 113030 |||||| | || || || | | || | || || || ||||| | |||||| Sbjct 140926 TACACGTCCAATATTTACCAGCGACGTGTGCTTGCCGGCGAGTTCCAAGTCGTCAACCCC 140985 Query 113031 CATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATG 113090 || || | |||||| || || ||||| ||||| | | |||||| ||| ||| Sbjct 140986 TGGCTTCTGAAGGACCTCGTCGATATGGGTCTGTGGTCGGACAACATGAAGAATCGCATC 141045 Query 113091 GTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAAGAAGTTG 113150 | | || ||||| ||||| || ||| | || |||| || || ||| | Sbjct 141046 ATCGCCGAAGGCGGTTCGATTCAGAACATTCCCAACATCCCAGCCGATATCAAGGCACTC 141105 Query 113151 TACCGCACAGTTTGGGAAA--TCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTG 113208 ||| ||||| ||||||| ||| | | ||| | | ||||| || || |||| Sbjct 141106 TACAAGACAGTCTGGGAAATTTCACAGCGTA--CCGTCGTCCAGATGGCGGCCGACCGTG 141163 Query 113209 GTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCATG---GAAAGTCCAACGAT 113263 | |||||| || | |||| ||| | || | |||| ||| || || || Sbjct 141164 GAGCCTTCATCGACC--AGTCCCAGTCGCTCAACATCCACATGCGTGAA---CCGACCAT 141218 Query 113264 GTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTA 113323 | |||| || | |||||| | | | |||||| ||||||||| ||||| ||||| Sbjct 141219 GGGCAAGATCACCAGCATGCACTTCACCGGCTGGAAGTTGGGTCTCAAGACGGGCATGTA 141278 Query 113324 TTACCTCCG 113332 |||||||| Sbjct 141279 CTACCTCCG 141287 >seq28 Length=150989 Score = 84.2 bits (92), Expect = 3e-11 Identities = 155/225 (69%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 16065 GCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGA 16124 ||||||||||| || ||||||| |||||| || ||| | ||| || |||| || Sbjct 7130 GCATCAATCTCGTCGATGAAGATGATGCAGGGGGCATTCTTGCGCGCCGTGGCAAATAGG 7189 Query 16125 TCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-ACA 16183 || || || || ||||| || || || |||||||| || || | | | || || Sbjct 7190 TCTCGGACGCGGGACGCGCCGACGCCCACGAACATCTCGACGAACTCGGAGCCGCTGACG 7249 Query 16184 TTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGT 16243 || | |||||| || | || || || || | || | |||||| || |||||||| || Sbjct 7250 CTGAA-GAAGGGTACCTGCGACTCGCCGGCCGTCGCCCTGGCGAGCAGGGTCTTACCGGT 7308 Query 16244 ACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 16288 ||| || ||| | |||| || || || || ||||||||||| Sbjct 7309 ACCAGGGGGACCGGACAGGATAGCGCCACGGGGGATCTTGGCGCC 7353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620736161538880