Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09] 804 sequences; 36,704,944 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq32 89.7 4e-13 >seq32 Length=147543 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 101279 TCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAAT 101338 || || || || ||||| |||| | || | | || ||||| ||||| || || || Sbjct 71196 TCCTTCTGGATGTTGTAGTCGGACAGGGTCCGACCGTCCTCCAACTGCTTGCCCGCGAAG 71137 Query 101339 ATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATT 101398 || | |||||||||||| ||||| ||||| || || || || || ||| ||| || | Sbjct 71136 ATGAGACGCTGTTGATCAGGCGGGATGCCCTCCTTGTCCTGGATCTTTGATTTGACGTTG 71077 Query 101399 TCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACA 101458 || | ||||| || | ||||| || | |||| ||| ||||| || | ||| || || Sbjct 71076 TCAATGGTGTCCGAGGACTCCACCTCCAACGTGATCGTCTTGCCAGTCAGAGTCTTGACG 71017 Query 101459 AATATCTGCATG 101470 || || |||||| Sbjct 71016 AAAATTTGCATG 71005 Score = 86.0 bits (94), Expect = 5e-12 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 ||| || || || || || || ||||||||||| | || || | |||| || | || Sbjct 70981 ATGGAGCGTCGACTCCTTCTGGATATTGTAATCCGAGAGGGTACGACCATCCTCGAGCTG 70922 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 ||| || || || |||| ||||| || || |||||||| || || ||||| ||||| || Sbjct 70921 CTTGCCCGCGAAAATCAGGCGCTGCTGGTCAGGCGGAATACCCTCCTTATCCTGAATCTT 70862 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 || ||| | || | || || |||| |||||| || || |||| || || ||||| Sbjct 70861 CGACTTGACATTATCGATGGTATCGGACGATTCCACCTCGAGGGTGATGGTCTTTCCGGT 70802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396274516967028