Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09]
804 sequences; 36,704,944 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq12 435 6e-117
>seq12
Length=176190
Score = 435 bits (482), Expect = 6e-117
Identities = 1152/1741 (66%), Gaps = 50/1741 (3%)
Strand=Plus/Minus
Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612
|| || ||||| | || | || ||||||| |||||| || ||||||||||| |||||
Sbjct 141323 ACGGTGAACTGGATAGGTTGGGCTGCAGCCTGGGTGCGGAGGTAGTACATGCCCGTCTTG 141264
Query 212613 AGGCCCTTGCCCCAGCCGTGCATGTGCATTGCTG-TGAGTTTCTTCAGCTTAATATTCTG 212671
|| ||| ||||||| | |||||| |||| ||| |||| | || || |
Sbjct 141263 AGACCCAACTTCCAGCCGGTGAAGTGCAT-GCTGGTGA---TCTTGCCC---ATGGTCGG 141211
Query 212672 GTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCT 212731
||| | |||| | ||| || ||||| |||||| ||||| | | |
Sbjct 141210 TTCACGCATGTGG---------ATGTTGAGCGACTGGGACTGGTCGATGAAGGCTCCACG 141160
Query 212732 GTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTC 212791
||| || ||||| | | || | ||| || | ||||| || |||||| ||| | |
Sbjct 141159 GTCGGCCGCCATCTGGACGACGGTACGCTGTGAAATTTCCCAGACTGTCTTGTAGAGTGC 141100
Query 212792 TTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCC-CCTGTGT--ATGGTCAG 212848
|||| || |||||| | ||| |||||||| | || || ||| | ||| | |
Sbjct 141099 CTTGATATCGGCTGGGATGTTGGGAATGTTCTGAATCGAACCGCCTTCGGCGATGATGCG 141040
Query 212849 CTGCAGGCGCATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGG 212908
| | ||||| || ||| || ||| | | ||| ||| | || ||
Sbjct 141039 ATTCTT---CATGTTGTCCGACCACAGACCCATATCGACGAGGTCCTTCAGAAGCCAGGG 140983
Query 212909 GTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGG 212968
|||||| | ||||| || || | ||||| | | |||||||| || || ||||| ||
Sbjct 140982 GTTGACGACTTGGAACTCGCCGGCAAGCACACGTCGCTGGTAAATATTGGACGTGTAAGG 140923
Query 212969 CTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCAC 213028
||||| || |||||||| |||| ||||| | ||| ||| || ||||||||||| |
Sbjct 140922 CTCGAAGCATTCGTTGTTGCCCAAGATCTGCGAGGTGGAGGCAGTCGGCATGGGAGCGAG 140863
Query 213029 CAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCA 213088
||| |||||||||| || || ||||| ||| | | || | |||| |||||
Sbjct 140862 CAGCAGACTGTTCCGGACGCCATGCTCCTTGATCTTGGCCTTGAGAGCGTCCCAATCCCA 140803
Query 213089 TCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCT 213148
||| | |||| | || |||||||||||||| |||| | ||| || | |
Sbjct 140802 -----CAGGCTGGTCGGC----TTGACGTTCCACATGTCGTACTGGAGGATACCCTGGGA 140752
Query 213149 CACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGC 213208
|| || || | ||| | | ||| ||||| ||||||||||| || ||||| || ||
Sbjct 140751 GACAGGAGATCCTTCGTATGTCGGGTACGGGCCTTGCTCCTTGGCGAGGTCGCACGAAGC 140692
Query 213209 CTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGG 213268
| || || || | |||||||||||| || |||| | |||| |||| |||||| ||
Sbjct 140691 CGTCAACGCCGCATGGTAGATGGTTTCGAAGATCTGCTTGTTCAGCTCACGGGCCTCGGG 140632
Query 213269 GGACGTGAAGGGCATCATCATGCGTTG-GAACACATCAGCCAGCCCCTGGACCCCGATGC 213327
||| ||| |||||| | ||| ||| |||| || || ||||| || |||| ||
Sbjct 140631 AGACTCGAAAGGCATCCGGA-GCGCCAAGAAGGCATCCGCGAGACCCTGAACGCCGACGC 140573
Query 213328 CGATGGGTCTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAAGGGGTAAAAGTTGCAGT 213387
||||||| | ||| | | ||| ||| | ||||| | ||||| |||| ||
Sbjct 140572 CGATGGGGCGGTGGCGCGTGTTGCTATTGAAAGCCTCCTTGACCGGGTAGTGGTTGACGT 140513
Query 213388 CGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGAT 213447
||||||||||||| || |||||| | |||| | ||||| | ||| | || | ||
Sbjct 140512 CGATGATCTTGTTCAGATTGCGGACGACCACCTGAGTGACCTCATGCAGCTTCTGGAAAT 140453
Query 213448 TGAACACGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAA 213507
| | || | || | ||| |||| ||| || || | | ||||| |||||| |
Sbjct 140452 CGTAGACACCTTCGTTGTAATCCACGAACTGAGGAAGTGCCAAGGAGGCCAAGTTGCAGA 140393
Query 213508 CGGCCACCTCCT-GAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGG 213566
|||| ||||| | | ||| | | |||||| ||||| || ||||| |||||| || ||
Sbjct 140392 CGGCAACCTCATCGGGAG-CAGAGTACTCGATGATTTCAGTGCAGAGGTTGGAGCTGCGA 140334
Query 213567 ATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAG 213626
|| ||||||||||||| ||||| ||| |||| | |||||||||||||||| ||
Sbjct 140333 ATTGTGCCCAGGTTCTTCTGGTTGCTCTTCCGGTTGCAATGATCCTTGTAGAGCATGAAG 140274
Query 213627 GGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCT--CCAGAGGTACCTGGCCTTGA 213684
||| || ||||| ||| | | | || || ||| ||| || | | ||||||||
Sbjct 140273 GGGTTGCCAGTCTCGGTCTGAGCCTCGAGGAT--GGCATACCATAGCTTCTGGGCCTTGA 140216
Query 213685 CCACCCGCCTGACAGCTCCGGGCGTAGC-CTCGTACTGTTCGTAGAGCTCGTTGAATTCG 213743
|| | || | | ||| | | |||||||| ||||| || | | || ||
Sbjct 140215 CC----GTCTTGCGTCCGCGGTCCTCCTTCTCGTACTTCTCGTATAGAGCCTCAAACTCT 140160
Query 213744 TGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCG 213803
| ||| || | | || || || || ||| |||||||| |||| ||||||
Sbjct 140159 TCGCCGTAGCAGTCGGCGAGACCGGGGCACTCATTGGGGCACATGAGCGTCCACTCCCCG 140100
Query 213804 T-CATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCT 213862
| | |||| || | || |||||| || ||||||| ||||| || ||| ||||| |
Sbjct 140099 TTCTTCTCA-ACGCGCTTCATGAAAAGATCCGGGATCCACAAAGCAAGGAAGAGGTCGCG 140041
Query 213863 GGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGC 213922
| | | ||| ||| || ||| || || || || ||||| || |||| || ||
Sbjct 140040 AGCACGCACCTCTTCCTTACCGTGGTTCTTCCGGAGGTCCAGAAACTCGAAGACATCGGC 139981
Query 213923 GTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG---CCGCCCTGGTCCAC 213979
||||| ||||| | || |||||||||||||| || | |||| ||||||||||| ||
Sbjct 139980 ATGCCAAGGCTCAAGATATATGGCAAAGGCGCCGGGACGCTTGTTGCCGCCCTGGTCGAC 139921
Query 213980 CAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTT 214039
||||||| ||||||||| |||||| | ||| | | |||||||| |||||
Sbjct 139920 GTACCTGGCCGTATTGTTGAAGACGCGCAGCATGGGAATGATGCCGTTGGAGGTACCGTT 139861
Query 214040 GGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGCCCTATGCCACC 214099
|| || || || || ||||||| ||| | | | | ||| || || ||||| ||
Sbjct 139860 TGTGCCGGCGATGTAGGAGCCGGTGGCACGGATGCGGTGGATGTTCAGGCCAATGCCGCC 139801
Query 214100 GGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTC 214159
||| |||||||||||||||||| | | | || || |||||| | ||||||||
Sbjct 139800 GGCCATCTTGGAGATCATGGCGCAAGTCTTGAGCGTGTCGTAGATGCCCTCGATGCTGTC 139741
Query 214160 ATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGTTGAA 214219
||| | | || | || ||||||| ||||||||||| | || | || | ||||||
Sbjct 139740 ATCCTTCATGTCGACCAGGAAGCAGGACGAGAGCTGGGCCTGGGGTGTACCGGCGTTGAA 139681
Query 214220 AAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGGAC 214279
|| || || || || | | |||||| | || | ||| |||| ||||| | |||
Sbjct 139680 GAGGGTCGGCGAAGCGTGTGTGAAGAACTTGCTCGACATGAGGTTGTATGTCTCAATGAC 139621
Query 214280 T 214280
|
Sbjct 139620 T 139620
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931523438095360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |