Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09] 804 sequences; 36,704,944 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq12 279 1e-69 >seq12 Length=176190 Score = 279 bits (308), Expect = 1e-69 Identities = 844/1288 (66%), Gaps = 37/1288 (3%) Strand=Plus/Minus Query 221403 GGGCGCAAGACTGCGTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTC 221462 || |||| || ||||| || || ||||||||||| || |||||| |||||| || | Sbjct 140704 GGTCGCACGAAGCCGTCAACGCCGCATGGTAGATGGTTTCGAAGATCTGCTTGTTCAG-C 140646 Query 221463 TCTTGG-CCTCGGGAGAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCC 221521 || || |||||||||| ||| ||||| || ||| | ||| | || || || ||| Sbjct 140645 TCACGGGCCTCGGGAGACTCGAAAGGCATCCGGAGCGCCAAGAAGGCATCCGCGAGACCC 140586 Query 221522 TGTACTCCGATACCGATGGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGA 221581 || || |||| |||||||| | ||| | | ||||| | | || || || || Sbjct 140585 TGAACGCCGACGCCGATGGGGCGGTGGCGCGTGTTGCTATTGAAAGCCTCCTTGACCGGG 140526 Query 221582 TAAAAGTTGACGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTC 221641 || |||||||||||| | ||||| || || | || || | | ||||| | Sbjct 140525 TAGTGGTTGACGTCGATGATCTTGTTCAGATTGCGGACGACCACCTGAGTGACCTCATGC 140466 Query 221642 AGCTTCTGGTGATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTT 221701 ||||||||| || | | || || |||| | ||||| || Sbjct 140465 AGCTTCTGGAAATCGTAGACA---------CCTTCGTTGTAA---TCCACGAACTGAGGA 140418 Query 221702 AGGGCAACGCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATC 221761 || || | | ||||| ||| || ||||| ||||| || | |||| ||||| Sbjct 140417 AGTGCCAAGGAGGCCAAGTTGCAGACGGCAACCTCATCGGGAGCAGAGTACTCGATGATT 140358 Query 221762 TCTGTACAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTG 221821 || || ||||||||| || || || ||||||| || || || ||| || ||| Sbjct 140357 TCAGTGCAGAGGTTGGAGCTGCGAATTGTGCCCAGGTTCTTCTGGTTGCTCTTCCGGTTG 140298 Query 221822 GCAGCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTG 221881 | |||||||||||||| ||||| ||||||||| ||||||| | || || Sbjct 140297 CAATGATCCTTGTAGAGCATGAAGGGGTTGCCAGTCTCGGTCTGAGCCTCGAGGATGGCA 140238 Query 221882 TCCCAGAGTTCTCTGGCGCTC-ACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATAC-- 221938 | ||| || | ||||| || |||||| ||| | | | || ||| || ||| Sbjct 140237 TACCATAGCT-TCTGGGCCTTGACCGTC---TTGCGTCCGCGGTCCTCCTTCTCGTACTT 140182 Query 221939 CCGGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCG 221998 | ||||||||| | |||||| ||| ||||| ||| | || || || ||| | Sbjct 140181 CTCGTATAGAGCCT--CAAACTCTTCGCCGTAGCAGTCGGCGAGACCGGGGCACTCATTG 140124 Query 221999 GGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATC 222058 || ||||| || |||| | | ||| | | || | || |||||| || ||||||||| Sbjct 140123 GGGCACATGAGCGTCCACTCCCCGTTCTTCTCAACGCGCTTCATGAAAAGATCCGGGATC 140064 Query 222059 CACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGA 222118 |||| || | ||||| || | | ||| ||| ||| |||| ||| |||| || Sbjct 140063 CACAAAGCAAGGAAGAGGTCGCGAGCACGCACCTCTTCCTTACCGTGGTTCTTCCGGAGG 140004 Query 222119 TCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGT 222178 |||| |||||| || | || || ||||| ||||| ||||| | ||| | |||||||| Sbjct 140003 TCCAGAAACTCGAAGACATCGGCATGCCAAGGCTCAAGATATATGGCAAAGGCGCCGGGA 139944 Query 222179 CGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGT 222238 ||||||||||| ||||| || || ||| || | |||||||| ||| || | || Sbjct 139943 CGCTTGTTGCCGCCCTGGTCGACGTACCTGGCCGTATTGTTGAAGACGCGCAGCATGGGA 139884 Query 222239 ACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTA 222298 | | |||||||| |||||| ||||| ||||| | ||| ||| | || | Sbjct 139883 ATGATGCCGTTGGAGGTACCGTTTGTGCCGGCGATGTAGGAGCCGGTGGCAC---GGATG 139827 Query 222299 C--TGGCAG-ACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGA 222355 | ||| | || ||| || || ||||| || |||||||||||||| ||||||| Sbjct 139826 CGGTGGATGTTCAGGCCAATGCCGCCGGCCATCTTGGAGATCATGGCGCAAGTCTTGAGC 139767 Query 222356 GTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATC 222415 ||||| ||||||||| || ||| ||||| | || | ||| || || ||||| | | Sbjct 139766 GTGTCGTAGATGCCCTCGATGCTGTCATCCTTCATGTCGACCAGGAAGCAGGACGAGAGC 139707 Query 222416 TGAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTA 222475 || | | || | || |||||| || || || || |||||||| ||| | || Sbjct 139706 TGGGCCTGGGGTGTACCGGCGTTGAAGAGGGTCGGCGAAGCGTGTGTGAAGAACTTGCTC 139647 Query 222476 GACATCAGATCGTACGTCTCTACGACTCTGGCGATGTTGTC-CCCGTGAATCTGCATGGC 222534 ||||| || | ||| ||||| | ||||| ||| |||||| ||| || | | | ||| Sbjct 139646 GACATGAGGTTGTATGTCTCAATGACTCGCTCGACGTTGTCTCCCCAGATGCCG-ACGGC 139588 Query 222535 GCATCTCATGTACATGTACTGGGGCCTCTCCACAGGAC---CCTTGGAGCTGGAGAGCAG 222591 | |||| ||||| ||| || | ||| || | | || | ||||| || || Sbjct 139587 AACGCGCATGATCATGTGCTGTGGACGCTCGAC-GATCTTGCCATCGAGCT--TCAGGAG 139531 Query 222592 GTACGATTTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAAC 222651 ||||| || || |||||||| |||||||| | | || ||||| | | | || Sbjct 139530 ATACGACCGCTCAAGCGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCCCGATCATATAC 139471 Query 222652 CACGGCGGCGTCCAGCTCCGACTTGTGC 222679 | ||| | ||| ||||| ||||||| Sbjct 139470 GATGGCCGAGTCGAGCTCTTCCTTGTGC 139443 Score = 91.5 bits (100), Expect = 3e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 221116 GTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGG 221175 ||| || |||||||| || || | ||||| | | |||||| | || || ||| | || Sbjct 140982 GTTGACGACTTGGAACTCGCCGGCAAGCACACGTCGCTGGTAAATATTGGACGTGTAAGG 140923 Query 221176 TTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCAC 221235 |||| || ||||||||||||| |||||| | ||| ||| || |||||||| || | Sbjct 140922 CTCGAAGCATTCGTTGTTGCCCAAGATCTGCGAGGTGGAGGCAGTCGGCATGGGAGCGAG 140863 Query 221236 CAGCAGACTGTTGCG 221250 |||||||||||| || Sbjct 140862 CAGCAGACTGTTCCG 140848 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928835465109760