Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09] 804 sequences; 36,704,944 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq12 266 4e-66 >seq12 Length=176190 Score = 266 bits (294), Expect = 4e-66 Identities = 1186/1850 (64%), Gaps = 59/1850 (3%) Strand=Plus/Plus Query 75146 TACTTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTCAACGGCTCGATGGCATCCTCATG 75205 |||||||| |||| || |||||| | ||||| | ||||||||||| || | Sbjct 139498 TACTTTGGCTTCAAGACGCTTGAGCGGTCGTATCTCCTGAAGCTCGATGGCAAGATCGTC 139557 Query 75206 GAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGAT 75265 || |||||| ||||| ||||||| || || |||||||| || || || | || Sbjct 139558 GAGCGTCCACAGCACATGATCATGCGCGTTGCCGTCGGCATCTGGGGAGACAACGTCGAG 139617 Query 75266 TCTGTCTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAA 75323 ||| | ||||||||| || ||||| |||| | | ||| ||||| | || | Sbjct 139618 CGAGTCATTGAGACATACAACCTCATGTCGAGCAAGTTCT--TCACACACGCTTCGCCGA 139675 Query 75324 CCCTCTTCAATGCTGGTACACCA-AGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAAC 75382 |||||||||| || |||||||| || || ||| | || |||||||| ||| || Sbjct 139676 CCCTCTTCAACGCCGGTACACCCCAGGCC-CAGCTCTCGTCCTGCTTCCTGGTCGACATG 139734 Query 75383 AAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAA--ATCTCAA 75440 ||||| ||| ||| | || ||||| | || || | | | | ||||| | ||||| | Sbjct 139735 AAGGATGACAGCATCGAGGGCATCTACGACACGCTCAAG-ACT-TGCGCCATGATCTCCA 139792 Query 75441 AGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-T 75499 || ||| || || ||||| || ||||||| | | |||| ||| || | Sbjct 139793 AGATGGCCGGCGGCATTGGCCTGAACATCCACCGCATCCGTGCCACCGG--CTCCTACAT 139850 Query 75500 CGGGGG-ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCAC 75558 || || ||||| ||| || | || || ||||| ||||| ||||| || ||| || Sbjct 139851 CGCCGGCACAAACGGTACCTCCAACGGCATCATTCCCATGCTGCGCGTCTTCAACAATAC 139910 Query 75559 AGCGCGCTATGTAAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTT 75612 || | || || | || | || ||||| | || || | || | || | Sbjct 139911 GGCCAGGTACGTCGACCAGGGCGGCAACAAGCGTCCC---GGCGCCTTTGCCATATATCT 139967 Query 75613 GGAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGA 75672 || || |||||||||||| || | ||||| || || | || ||||| ||| | || Sbjct 139968 TGAGCCTTGGCATGCCGATGTCTTCGAGTTTCTGGACCTCCGGAAGAACCACGGTAAGGA 140027 Query 75673 AGAGGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCG 75732 ||||| || | | || ||||| | ||||||| || || |||||||||||||| Sbjct 140028 AGAGGTGCGTGCTCGCGACCTCTTCCTTGCTTTGTGGATCCCGGATCTTTTCATGAAGCG 140087 Query 75733 GGTTGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGA 75792 |||||| || || | ||| | || | || || | || || |||||| |||| Sbjct 140088 CGTTGAGAAGAACGGGGAGTGGACGCTCATGTGCCCCAATGAGTGCCCCGGTCTCGCCGA 140147 Query 75793 CGCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAA 75852 | || || |||||||| || || ||| ||||| || |||||| | || | Sbjct 140148 CTGCTACGGCGAAGAGTTTGAGGCTCTATACGAGAAGTACGAGAAGGAGG--ACCGCGGA 140205 Query 75853 TGC--GACTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGAC 75909 || ||| || | || | | || | | ||| | || || ||| | | ||||| ||||| Sbjct 140206 CGCAAGACGGT-CAAGGCCCAGAAGCTATGGTATGCCATCCTCGAGGCTCAGACCGAGAC 140264 Query 75910 TGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTT 75969 ||| | || | ||||| ||||||||| ||| ||| |||||| ||||| ||||| | Sbjct 140265 TGGCAACCCCTTCATGCTCTACAAGGATCATTGCAACCGGAAGAGCAACCAGAAGAACCT 140324 Query 75970 GGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGA 76029 ||| ||||| ||||| || || ||||| ||||| | |||||| | | | ||||| Sbjct 140325 GGGCACAATTCGCAGCTCCAACCTCTGCACTGAAATCATCGAGTACTCTGCTCCCGATGA 140384 Query 76030 GACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGT------ATGTCAATGAAGA 76083 | || || ||||| ||||| || | || ||||| ||| || ||| |||| Sbjct 140385 GGTTGCCGTCTGCAACTTGGCCTCCTTGGCACTTCCTCAGTTCGTGGATTACAACGAAG- 140443 Query 76084 GACTCGCACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCT 76143 | || | |||| | || || ||||| |||| || | || | ||||| Sbjct 140444 GTGTC-----TACGATTTCCAGAAGCTGCATGAGGTCACTCAGGTGGTCGTCCGCAATCT 140498 Query 76144 AAACCGAGTCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCG 76203 ||| |||| ||| || || || || || || || || | ||| Sbjct 140499 GAACAAGATCATCGACGTCAACCACTACCCGGTCAAGGAGGCTTTCAATAGCAACACGCG 140558 Query 76204 ACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTA 76263 ||| | || || || | || ||||| ||||||||||||| || | | ||| | Sbjct 140559 CCACCGCCCCATCGGCGTCGGCGTTCAGGGTCTCGCGGATGCCTTCTTGGCGCTCCG-GA 140617 Query 76264 CGCATTT-GATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATC 76322 || ||| || || || ||| ||| |||| | ||||| |||||||| || | Sbjct 140618 TGCCTTTCGAGTCTCCCGAGGCCCGTGAGCTGAACAAGCAGATCTTCGAAACCATCTACC 140677 Query 76323 ACGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTG 76382 | || | || ||| || || | || | | ||||| | || ||||| | Sbjct 140678 ATGCGGCGTTGACGGCTTCGTGCGACCTCGCCAAGGAGCAAGGCCCGTACCCGACATACG 140737 Query 76383 AGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGC 76442 | || ||||| | ||||| || | || |||| || |||| |||| || || || | | Sbjct 140738 AAGGATCTCCTGTCTCCCAGGGTATCCTCCAGTACGACATGT-GGAACGTCAAGCCGACC 140796 Query 76443 -TCAACTACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGT 76501 | | || ||||| | |||||||| ||||||||| | || | || |||||| Sbjct 140797 AGCCTGTGGGATTGGGACGCTCTCAAGGCCAAGATCAAGGAGCATGGCGTCCGGAACAGT 140856 Query 76502 CTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGC 76561 || || | || || ||||| || ||||||||| | || |||||||| || || |||||| Sbjct 140857 CTGCTGCTCGCTCCCATGCCGACTGCCTCCACCTCGCAGATCTTGGGCAACAACGAATGC 140916 Query 76562 TTTGAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATT 76621 || || || ||||| | || || |||| | || | || || || ||||| | Sbjct 140917 TTCGAGCCTTACACGTCCAATATTTACCAGCGACGTGTGCTTGCCGGCGAGTTCCAAGTC 140976 Query 76622 GTCAACAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAG 76681 |||||| || | || |||||| | || ||||| ||||| | | |||||| Sbjct 140977 GTCAACCCCTGGCTTCTGAAGGACCTCGTCGATATGGGTCTGTGGTCGGACAACATGAAG 141036 Query 76682 GATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATC 76741 ||| ||| | | || ||||| ||||| || || | | ||||||| |||||| Sbjct 141037 AATCGCATCATCGCCGAAGGCGGTTCGATTCAGAACATTCCCAACATCCCAGCCGATATC 141096 Query 76742 AAGAATCTCTACCGCACAGTGTGGGAAA--TCAAGATGAAAGATGTCATTGACATGGCCG 76799 ||| |||||| ||||| ||||||| ||| | | ||| | | ||||| | Sbjct 141097 AAGGCACTCTACAAGACAGTCTGGGAAATTTCACAGCGTA--CCGTCGTCCAGATGGCGG 141154 Query 76800 CAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCATG---GAAAG 76854 | || ||||| |||||| || | |||| ||| | || | |||| ||| Sbjct 141155 CCGACCGTGGAGCCTTCATCGACC--AGTCCCAGTCGCTCAACATCCACATGCGTGAA-- 141210 Query 76855 TCCAACGATGTCCAAGCTCTCTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAAAAC 76914 || || ||| |||| || | ||||| | || ||||| ||| ||||| || Sbjct 141211 -CCGACCATGGGCAAGATCACCAGCATGCACTTCACCGGCTGGAAGTTGGGTCTCAAGAC 141269 Query 76915 CGGAATGTACTATCTCCGATCAAAGGCGAAAGCCCGACCAATTCAGTTCA 76964 || |||||||| ||||| | |||| ||||| ||| || ||||||| Sbjct 141270 GGGCATGTACTACCTCCGCACCCAGGCTGCAGCCCAACCTATCCAGTTCA 141319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596563604475520