Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09] 804 sequences; 36,704,944 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq67 104 7e-17 >seq67 Length=117402 Score = 104 bits (114), Expect = 7e-17 Identities = 186/272 (68%), Gaps = 0/272 (0%) Strand=Plus/Plus Query 302593 CGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGA 302652 |||||||| || ||||| || | ||| || || || |||||||| || || | | | Sbjct 57153 CGACGCTGGATGTAACCGGTCTCGGCTGTCTTGACGGCGGTATCAATCAGGCCCTCTCTA 57212 Query 302653 CCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCA 302712 ||| |||| ||||||||||| | ||| || || || | | | ||| | || Sbjct 57213 CCAGCCATGGCATGGAAGAAGAACTCGGAGGGAGTTAAGCCACGGAGGTACGAGTTTTCG 57272 Query 302713 ACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTC 302772 ||||| || || |||||||| || | |||| ||| || || ||||| || || | || Sbjct 57273 ACGAACCCTCGAGCCTCGGGAGAGTAGTCGTCCTTTGTGAAATGTGGGAGCGTACGGTAT 57332 Query 302773 TCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATC 302832 | | ||||| | ||||| ||||| || || ||| |||| || || | | | | ||||| Sbjct 57333 TTAAAGCCGAACGGGATGCGCTTCCCTTCGACGATCTGTTGCCCGACTAAAGCAGTCATC 57392 Query 302833 TGCGAAATATTTAAATCACTGCCCTTGGAGCC 302864 ||||| || || | | ||||||||| || Sbjct 57393 TGCGAGATGTTGATCGAAGAGCCCTTGGATCC 57424 Score = 86.0 bits (94), Expect = 2e-11 Identities = 111/153 (73%), Gaps = 3/153 (2%) Strand=Plus/Plus Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872 |||||||| | | ||||| |||||| | || ||||| || |||| ||||| ||| Sbjct 56349 AGAATTTCCTTGAGGCGGGGGACACCAAGTGTGACGTTT---TTAGACGACACACCGGCA 56405 Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932 |||||||| || ||||| || | ||||| | |||||||| || || || || | | Sbjct 56406 AAGTGGAATGTGTTCAGCGTCATCTGAGTGGCCGGCTCACCGATGGACTGGGCGGCGAGC 56465 Query 301933 ATACCAACCATTTCTCCTGGTGCTACAATAGAC 301965 | |||||||||||||| || | || |||||| Sbjct 56466 ACTCCAACCATTTCTCCAGGCGAGACCATAGAC 56498 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471802438438948