Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09]
804 sequences; 36,704,944 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq12 203 4e-46
seq291 104 3e-16
seq283 102 1e-15
seq110 87.8 2e-11
>seq12
Length=176190
Score = 203 bits (224), Expect = 4e-46
Identities = 281/395 (71%), Gaps = 15/395 (4%)
Strand=Plus/Minus
Query 1630062 GCACTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTT 1630121
|| |||||||||||| | ||||| | ||| |||||||| |||||||| | || ||||||
Sbjct 139932 GCCCTGGTCGACGTACCTGGCCGTATTGTTGAAGACGCGCAGCATGGGAATGATGCCGTT 139873
Query 1630122 GGACTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAA 1630181
||| ||||| ||||| || | ||||| ||||| ||| || | ||| | |
Sbjct 139872 GGAGGTACCGTTTGTGCCGGCGATGTAGGAGCCGGTGGCACGGATGCGGTGGATGTTCAG 139813
Query 1630182 GCCGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCC 1630241
||| |||||||||||| ||||||||| | ||||| ||||||||||||||||||||
Sbjct 139812 GCCAATGCCGCCGGCCATCTTGGAGATCATGGCGCAAGTCTTGAGCGTGTCGTAGATGCC 139753
Query 1630242 CTCGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGT 1630301
|||||| ||| |||||||||| || || ||||| |||||| || | || | ||
Sbjct 139752 CTCGATGCTGTCATCCTTCATGTCGACCAGGAAGCAGGACGAGAGCTGGGCCTGGGGTGT 139693
Query 1630302 GCCGGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTA 1630361
|||||||||||||| || |||| || ||||| |||| | ||||||| || |||
Sbjct 139692 ACCGGCGTTGAAGAGGGTCGGCGAAGCGTGTGTGAAGAACTTGCTCGACATGAGGTTGTA 139633
Query 1630362 GGTGGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGC 1630421
|| | | || ||| || |||| | | || || ||||| |||
Sbjct 139632 TGTCTCAATGACTCGC------------TCGACGTTGTC---TCCCCAGATGCCGACGGC 139588
Query 1630422 GACGCGCATGAGCATGTACTGGGGCCGCTCGACGA 1630456
|||||||||| ||||| ||| || ||||||||||
Sbjct 139587 AACGCGCATGATCATGTGCTGTGGACGCTCGACGA 139553
>seq291
Length=46110
Score = 104 bits (114), Expect = 3e-16
Identities = 118/157 (75%), Gaps = 1/157 (1%)
Strand=Plus/Minus
Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106
|| ||||| ||||| || || || ||||| ||||| | || ||| | ||||||
Sbjct 34541 GATAGCATTGGCGGAACCGTTACCTGCGTCATCCGCAATGCTCCTAGCGGCTTGGGCGAG 34482
Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166
|| ||||| |||||| |||||||| | | || |||||||||||| |||||||||||
Sbjct 34481 CCTTGCTTCGACAAGCTCGAGGCCATGTTGGCACACGCCATGCTGAGCATCCCGGCCACA 34422
Query 19167 AAGGGATTCGAGATTGGCAGCGGGTTT-GCGGGTGCG 19202
||||| |||||||| || ||| ||| |||| ||||
Sbjct 34421 AAGGGCTTCGAGATCGGTTCCGGCTTTGGCGGCTGCG 34385
Score = 86.0 bits (94), Expect = 8e-11
Identities = 162/236 (69%), Gaps = 2/236 (1%)
Strand=Plus/Minus
Query 18096 CTTTGGCGAGTCGCACGGGGCGGGC-GTCGGCTGCATCATCGACGGCGTGCCGCCGTGCA 18154
|| ||||||||| ||| | || | |||||||||||| |||||||| |||||| |||
Sbjct 35226 CTATGGCGAGTCCCACTGC-CGCTCTGTCGGCTGCATCGTCGACGGCTGCCCGCCGGGCA 35168
Query 18155 TGCCACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCG 18214
|| || | |||| ||||||||||| ||| || || || || ||||||||| ||
Sbjct 35167 TGGAGCTCACAGAGGAGGACATCCAGCCCCAGATGACGCGCCGGCGCCCGGGCCAGAGCA 35108
Query 18215 CACTTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGAACG 18274
| | || || || |||||| || | || | |||||||| || || ||| |
Sbjct 35107 ACATCACGACTCCCCGGAACGAGAAGGACAGGGTGCTGATCCAGTCTGGAACCGAGTTTG 35048
Query 18275 GCCTCACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGGCCC 18330
|| | || ||||| |||| | ||| | | ||| || ||||||||||||
Sbjct 35047 GCGTAACTCTCGGGACGCCAATTGGCATGATGGTGTTGAATGAAGACCAGCGGCCC 34992
>seq283
Length=47698
Score = 102 bits (112), Expect = 1e-15
Identities = 88/109 (81%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245
|| || ||||| |||||||||||| | || || || | || |||||| | || |||||
Sbjct 8824 GCTGCAAACTATCTCGACATCAAGGCACTTCTGGACGTCGGCTGCAAGACAGTTGCCAAT 8765
Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCA 1592294
||||||||||||||||| || ||||||||||| || || || |||||||
Sbjct 8764 ATGATCAAGGGCAAGTCTCCGGAGGAGATCCGGAAAACTTTCAACATCA 8716
>seq110
Length=94451
Score = 87.8 bits (96), Expect = 2e-11
Identities = 90/118 (76%), Gaps = 0/118 (0%)
Strand=Plus/Minus
Query 344181 GGTGGCCTTCCCCACCGAGACCGTCTACGGCCTCGGCGCCGACGCCACGTCTGACGAGGC 344240
||| || ||||| || ||||||||||||||||||||||| |||||||| ||| ||
Sbjct 36826 GGTCGCTTTCCCAACAGAGACCGTCTACGGCCTCGGCGCTGACGCCACCCGCTCCGACGC 36767
Query 344241 CGTGCGGCGCATCTTTGAGGTCAAGGGCCGACCCTCCAACAACCCGATCATTGTGCAC 344298
||| ||| | |||| | ||||||||| || ||| ||||||| | || ||||||
Sbjct 36766 CGTCCGGGGAATCTACACAGCCAAGGGCCGCCCATCCGACAACCCCTTAATCGTGCAC 36709
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107073219994868
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |