Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09]
804 sequences; 36,704,944 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq12 183 3e-41
seq32 107 2e-18
seq20 93.3 4e-14
seq177 89.7 5e-13
>seq12
Length=176190
Score = 183 bits (202), Expect = 3e-41
Identities = 1018/1606 (63%), Gaps = 70/1606 (4%)
Strand=Plus/Minus
Query 138433 GCAATGATGCGATTTCTCATGTCATCGTTGTACAGATTCAACTTGATCAAGTCGTTTATC 138492
|| ||||||||||| |||||| || ||||| || | || | ||| || |
Sbjct 141050 GCGATGATGCGATTCTTCATGTTGTCCGACCACAGACCCATATCGACGAGGTCCTTCAGA 140991
Query 138493 AGATATCTGTTTATGACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTG 138552
|| | ||| | ||| || || || ||||| | || || || |||||| |||
Sbjct 140990 AGCCAGGGGTTGACGACTTGGAACTCGCCGGCAAGCACACGTCGCTGGTAAATATTGGAC 140931
Query 138553 GTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATG 138612
||| ||||||| || |||||||||| |||| ||||| | |||| || |||||||||
Sbjct 140930 GTGTAAGGCTCGAAGCATTCGTTGTTGCCCAAGATCTGCGAGGTGGAGGCAGTCGGCATG 140871
Query 138613 TACGCCACCAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACGAC 138672
|| | || ||| ||||| | || || |||||| ||||||| | |
Sbjct 140870 GGAGCGAGCAGCAGACTGTTCCGGACGCCATGCTCCTTGATCTTGGCCTTGAGAGCGTCC 140811
Query 138673 CAGTCCCACAAATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTT 138732
|| ||||||| | | || || ||||||||| |||||||| | || |||
Sbjct 140810 CAATCCCACAGGCTGGTCGGCTTGACGTTCCACATGTCGTACTGGAGGATACCCTGGGAG 140751
Query 138733 GCGGGACTGCCTTCGTACGAATCGTATACA--CCAAACTCTTGCGCCAACTCGTTGCTCG 138790
| ||| |||||||| | ||| ||| || ||| | || | ||| |
Sbjct 140750 ACAGGAGATCCTTCGTATG--TCGGGTACGGGCCTTGCTCCTTGGCGAGGTCGCACGAAG 140693
Query 138791 CCTCGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGG 138850
|| | ||| ||| ||| || |||||| ||||||| || ||| ||||||||||
Sbjct 140692 CCGTCAACGCCGCATGGTAGATGGTTTCGAAGATCTGCTTGTTCAGCTCACGGGCCTCGG 140633
Query 138851 CGCTCTCGTACGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTC 138910
|||| | ||||| |||||| | ||| || || || || || || ||||| || |
Sbjct 140632 GAGACTCGAAAGGCATCCGGAGCGCCAAGAAGGCATCCGCGAGACCCTGAACGCCGACGC 140573
Query 138911 CGACAGGGCGATGGCGCAGATTTGACGCTTTTGCG-GCTTC---GATAGGATAATAGTTT 138966
||| ||||| |||||| || ||| ||| || || || || || | |||
Sbjct 140572 CGATGGGGCGGTGGCGCGTGTT----GCTATTGAAAGCCTCCTTGACCGGGTAGTGGTTG 140517
Query 138967 ACATCGATGATTTTGTTTAAATTTCGCACGACCACCTTAGT---CGTATGCTTTAATCGT 139023
|| |||||||| ||||| | ||| || |||||||||| ||| | |||| | | |
Sbjct 140516 ACGTCGATGATCTTGTTCAGATTGCGGACGACCACCTGAGTGACCTCATGC----AGCTT 140461
Query 139024 -TCAAAATCGTATGTGCCCCCGTTGTCGTCGACGACGTCGACAAATTTGTTGACACAAAT 139082
| |||||||| || |||||| || |||| | || || | |||
Sbjct 140460 CTGGAAATCGTAGACACCTTCGTTGTAATCCACGAACT-GAGGAAGTGC------CAAG- 140409
Query 139083 CGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACA 139142
||||| | |||||| || || || || ||||| | ||| |||| ||||| | ||
Sbjct 140408 -GAGGCCAAGTTGCAGACGGCAACCTCATCGGGAGCAGAGTACTCGATGATTTCAGTGCA 140350
Query 139143 CAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATC 139202
| || | || || || | || | || ||||| || ||||| ||| |||
Sbjct 140349 GAGGTTGGAGCTGCGAATTGTGCCCAGGTTCTTCTGGTTGCTCTTCCGGTTGCAATGATC 140290
Query 139203 TTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAA 139262
||||| ||||| | || ||||||| || || | ||| | ||| | | |
Sbjct 140289 CTTGTAGAGCATGAAGGGGTTGCCAGTCTCGGTCTGAGCCTCGAGGATG-----GCATA- 140236
Query 139263 GTCCCTAGCTTGTAT---TTGACGCACGTAAA-----GTTCGTCGCGCTCGTACTTTTCG 139314
|| |||||| | ||||| | | | || || ||||||||| |||
Sbjct 140235 --CCATAGCTTCTGGGCCTTGACCGTCTTGCGTCCGCGGTCCTCCTTCTCGTACTTCTCG 140178
Query 139315 TAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACAC 139374
|| || | || || ||| |||||| ||| | ||| || | |||| | || |||
Sbjct 140177 TATAGAGCCTCAAACTCTTCGCCGTAGCAGTCGGCGAGACCGGGGCACTCATTGGGGCAC 140118
Query 139375 ATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAA 139434
||||||| ||| | |||||| || |||||| ||||||| |||||||| |||||||||
Sbjct 140117 ATGAGCGTCCACTCCCCGTTCTTCTCAACGCGCTTCATGAAAAGATCCGGGATCCACAAA 140058
Query 139435 GCGAACAGCAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTACGTTTC--ATGTTAA 139492
|| | | | ||||| || | |||||| ||| ||| || | | || |
Sbjct 140057 GCAAGGAAGAGGTCGCGAGCACGCACCTCTTCCTTACCGTGGTT--CTTCCGGAGGTCCA 140000
Query 139493 GGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCG-- 139550
| || || || || || || ||||| || || ||||| ||||| | ||||| ||
Sbjct 139999 GAAACTCGAAGACATCGGCATGCCAAGGCTCAAGATATATGGCAAAGGCGCCGGGACGCT 139940
Query 139551 -TTTGCCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCA 139609
||||| || || ||||||| | | | ||| ||||| ||||||| ||| || |
Sbjct 139939 TGTTGCCGCCCTGGTCGACGTACCTGGCCGTATTGTTGAAGACGCGCAGCATGGGAATGA 139880
Query 139610 GACCGCTCGCTGTTCCGTTGGTGCTACGGATG--GGA-CTGTTGCGAGCTCGGACGTCAT 139666
||| | | || ||||| |||| |||| ||| | | || || |||| | |
Sbjct 139879 TGCCGTTGGAGGTACCGTTTGTGCCGGCGATGTAGGAGCCGGTG---GCACGGATGCGGT 139823
Query 139667 GTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAA-TCGCGTAATGTC 139725
| | || | ||| || |||||| | | ||||| || | ||||| || | | ||
Sbjct 139822 GGATGTTCAGGCCAATGCCGCCGGCCATCTTGGAGATCATGGCGCAAGTCTTG-AGCGTG 139764
Query 139726 TCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGC 139785
||||| || || |||||||| |||| ||| |||||| ||||| ||||| || ||
Sbjct 139763 TCGTAGATGCCCTCGATGCTGTCATCCTTCATGTCGACCAGGAAGCAGGACGAGAGCTGG 139704
Query 139786 GGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGAC 139845
| | || ||||| || || || || ||||| ||||| | | |||||
Sbjct 139703 GCCTGGGGTGTACCGGCGTTGAAGAGGGTCGGCGAAGCGTGTGTGAAGAACTTGCTCGAC 139644
Query 139846 ATCAATTCGTACGTTTCGATG--GCGCTC-ACAATATCCCTTCCGTGGATACCGACAGAG 139902
|| | | ||| || || ||| ||||| || | || ||| ||| ||||| |
Sbjct 139643 ATGAGGTTGTATGTCTCAATGACTCGCTCGACGTTGTC---TCCCCAGATGCCGACGGCA 139587
Query 139903 ACTCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtttttttCAGATA- 139961
|| ||||| | ||| || || || ||| | | | ||| |||| || |||||
Sbjct 139586 ACGCGCATGATCATGTGCTGTGGACGCTCGACGATCTTGCCATCGAGCTTCAGGAGATAC 139527
Query 139962 -ACCGTTCTCTAGGGTCTTGTAGCCAAAGTACCTATAGTTGAAATC 140006
|||| ||| || |||||| ||||||||||| |||||||| ||
Sbjct 139526 GACCG--CTCAAGCGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTC 139483
>seq32
Length=147543
Score = 107 bits (118), Expect = 2e-18
Identities = 164/230 (71%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | || ||||| || || || || ||||||||||| || ||| | |
Sbjct 71234 ATGCAGATTTTCGTCAAGACGCTCACAGGAAAGACGATTACGCTCGAGGTGGAATCTTCG 71293
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|||||| | || | || || ||||| || ||||| || || || || || |||||
Sbjct 71294 GACACAATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCGCCTGATCAG 71353
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTATA 24881
|| ||| | ||||| || || || ||| |||||||| ||| || | |||| || || |
Sbjct 71354 CAGCGTCTCATCTTCGCGGGCAAGCAGTTGGAGGATGGTCG-GACTC-TGTCTGACTACA 71411
Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
| || || ||||| ||||| ||||||||| |||| | || || |||
Sbjct 71412 ATATCCAGAAGGAGAGCACACTGCACTTGGTGCTGCGTCTCCGTGGTGGC 71461
>seq20
Length=161045
Score = 93.3 bits (102), Expect = 4e-14
Identities = 134/189 (71%), Gaps = 0/189 (0%)
Strand=Plus/Minus
Query 24705 TGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCG 24764
|||||||||| | || || || || ||||| ||||| || ||||| || || || | |
Sbjct 65655 TGCAGATCTTCGTGAAGACCCTCACGGGTAAGACTATCACCCTCGAGGTCGAGTCCTCGG 65596
Query 24765 ACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAAC 24824
| || | || | || || |||||||| ||||| || || || || || || || |
Sbjct 65595 ATACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCAGC 65536
Query 24825 AACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACA 24884
| || ||||||||||||| || ||||| ||||| | | | | || || || ||||
Sbjct 65535 AGCGCCTGATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGTACCCTCTCTGACTACAACA 65476
Query 24885 TTCAAAAGG 24893
|||||||||
Sbjct 65475 TTCAAAAGG 65467
>seq177
Length=70791
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || || || || ||||| || || || || || | | |
Sbjct 29615 ATGCAGATCTTCGTGAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC 29556
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| || || || || ||||| ||
Sbjct 29555 GACACCATCGACAATGTCAAGTCTAAGATCCAGGACAAGGAGGGCATCCCGCCCGACCAG 29496
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || | ||||||||||| || ||||| |||||| | | | || || ||||||
Sbjct 29495 CAGCGCCTAATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGGACTCTCTCCGACTATAAC 29436
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || ||||| || || ||| | ||| | || |||| || ||
Sbjct 29435 ATCCAGAAGGAGAGCACCCTCCACCTTGTGCTCCGCCTGCGTGGTGG 29389
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449893078529120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |