Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09] 804 sequences; 36,704,944 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq12 183 3e-41 seq32 107 2e-18 seq20 93.3 4e-14 seq177 89.7 5e-13 >seq12 Length=176190 Score = 183 bits (202), Expect = 3e-41 Identities = 1018/1606 (63%), Gaps = 70/1606 (4%) Strand=Plus/Minus Query 138433 GCAATGATGCGATTTCTCATGTCATCGTTGTACAGATTCAACTTGATCAAGTCGTTTATC 138492 || ||||||||||| |||||| || ||||| || | || | ||| || | Sbjct 141050 GCGATGATGCGATTCTTCATGTTGTCCGACCACAGACCCATATCGACGAGGTCCTTCAGA 140991 Query 138493 AGATATCTGTTTATGACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTG 138552 || | ||| | ||| || || || ||||| | || || || |||||| ||| Sbjct 140990 AGCCAGGGGTTGACGACTTGGAACTCGCCGGCAAGCACACGTCGCTGGTAAATATTGGAC 140931 Query 138553 GTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATG 138612 ||| ||||||| || |||||||||| |||| ||||| | |||| || ||||||||| Sbjct 140930 GTGTAAGGCTCGAAGCATTCGTTGTTGCCCAAGATCTGCGAGGTGGAGGCAGTCGGCATG 140871 Query 138613 TACGCCACCAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACGAC 138672 || | || ||| ||||| | || || |||||| ||||||| | | Sbjct 140870 GGAGCGAGCAGCAGACTGTTCCGGACGCCATGCTCCTTGATCTTGGCCTTGAGAGCGTCC 140811 Query 138673 CAGTCCCACAAATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTT 138732 || ||||||| | | || || ||||||||| |||||||| | || ||| Sbjct 140810 CAATCCCACAGGCTGGTCGGCTTGACGTTCCACATGTCGTACTGGAGGATACCCTGGGAG 140751 Query 138733 GCGGGACTGCCTTCGTACGAATCGTATACA--CCAAACTCTTGCGCCAACTCGTTGCTCG 138790 | ||| |||||||| | ||| ||| || ||| | || | ||| | Sbjct 140750 ACAGGAGATCCTTCGTATG--TCGGGTACGGGCCTTGCTCCTTGGCGAGGTCGCACGAAG 140693 Query 138791 CCTCGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGG 138850 || | ||| ||| ||| || |||||| ||||||| || ||| |||||||||| Sbjct 140692 CCGTCAACGCCGCATGGTAGATGGTTTCGAAGATCTGCTTGTTCAGCTCACGGGCCTCGG 140633 Query 138851 CGCTCTCGTACGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTC 138910 |||| | ||||| |||||| | ||| || || || || || || ||||| || | Sbjct 140632 GAGACTCGAAAGGCATCCGGAGCGCCAAGAAGGCATCCGCGAGACCCTGAACGCCGACGC 140573 Query 138911 CGACAGGGCGATGGCGCAGATTTGACGCTTTTGCG-GCTTC---GATAGGATAATAGTTT 138966 ||| ||||| |||||| || ||| ||| || || || || || | ||| Sbjct 140572 CGATGGGGCGGTGGCGCGTGTT----GCTATTGAAAGCCTCCTTGACCGGGTAGTGGTTG 140517 Query 138967 ACATCGATGATTTTGTTTAAATTTCGCACGACCACCTTAGT---CGTATGCTTTAATCGT 139023 || |||||||| ||||| | ||| || |||||||||| ||| | |||| | | | Sbjct 140516 ACGTCGATGATCTTGTTCAGATTGCGGACGACCACCTGAGTGACCTCATGC----AGCTT 140461 Query 139024 -TCAAAATCGTATGTGCCCCCGTTGTCGTCGACGACGTCGACAAATTTGTTGACACAAAT 139082 | |||||||| || |||||| || |||| | || || | ||| Sbjct 140460 CTGGAAATCGTAGACACCTTCGTTGTAATCCACGAACT-GAGGAAGTGC------CAAG- 140409 Query 139083 CGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACA 139142 ||||| | |||||| || || || || ||||| | ||| |||| ||||| | || Sbjct 140408 -GAGGCCAAGTTGCAGACGGCAACCTCATCGGGAGCAGAGTACTCGATGATTTCAGTGCA 140350 Query 139143 CAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATC 139202 | || | || || || | || | || ||||| || ||||| ||| ||| Sbjct 140349 GAGGTTGGAGCTGCGAATTGTGCCCAGGTTCTTCTGGTTGCTCTTCCGGTTGCAATGATC 140290 Query 139203 TTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAA 139262 ||||| ||||| | || ||||||| || || | ||| | ||| | | | Sbjct 140289 CTTGTAGAGCATGAAGGGGTTGCCAGTCTCGGTCTGAGCCTCGAGGATG-----GCATA- 140236 Query 139263 GTCCCTAGCTTGTAT---TTGACGCACGTAAA-----GTTCGTCGCGCTCGTACTTTTCG 139314 || |||||| | ||||| | | | || || ||||||||| ||| Sbjct 140235 --CCATAGCTTCTGGGCCTTGACCGTCTTGCGTCCGCGGTCCTCCTTCTCGTACTTCTCG 140178 Query 139315 TAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACAC 139374 || || | || || ||| |||||| ||| | ||| || | |||| | || ||| Sbjct 140177 TATAGAGCCTCAAACTCTTCGCCGTAGCAGTCGGCGAGACCGGGGCACTCATTGGGGCAC 140118 Query 139375 ATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAA 139434 ||||||| ||| | |||||| || |||||| ||||||| |||||||| ||||||||| Sbjct 140117 ATGAGCGTCCACTCCCCGTTCTTCTCAACGCGCTTCATGAAAAGATCCGGGATCCACAAA 140058 Query 139435 GCGAACAGCAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTACGTTTC--ATGTTAA 139492 || | | | ||||| || | |||||| ||| ||| || | | || | Sbjct 140057 GCAAGGAAGAGGTCGCGAGCACGCACCTCTTCCTTACCGTGGTT--CTTCCGGAGGTCCA 140000 Query 139493 GGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCG-- 139550 | || || || || || || ||||| || || ||||| ||||| | ||||| || Sbjct 139999 GAAACTCGAAGACATCGGCATGCCAAGGCTCAAGATATATGGCAAAGGCGCCGGGACGCT 139940 Query 139551 -TTTGCCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCA 139609 ||||| || || ||||||| | | | ||| ||||| ||||||| ||| || | Sbjct 139939 TGTTGCCGCCCTGGTCGACGTACCTGGCCGTATTGTTGAAGACGCGCAGCATGGGAATGA 139880 Query 139610 GACCGCTCGCTGTTCCGTTGGTGCTACGGATG--GGA-CTGTTGCGAGCTCGGACGTCAT 139666 ||| | | || ||||| |||| |||| ||| | | || || |||| | | Sbjct 139879 TGCCGTTGGAGGTACCGTTTGTGCCGGCGATGTAGGAGCCGGTG---GCACGGATGCGGT 139823 Query 139667 GTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAA-TCGCGTAATGTC 139725 | | || | ||| || |||||| | | ||||| || | ||||| || | | || Sbjct 139822 GGATGTTCAGGCCAATGCCGCCGGCCATCTTGGAGATCATGGCGCAAGTCTTG-AGCGTG 139764 Query 139726 TCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGC 139785 ||||| || || |||||||| |||| ||| |||||| ||||| ||||| || || Sbjct 139763 TCGTAGATGCCCTCGATGCTGTCATCCTTCATGTCGACCAGGAAGCAGGACGAGAGCTGG 139704 Query 139786 GGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGAC 139845 | | || ||||| || || || || ||||| ||||| | | ||||| Sbjct 139703 GCCTGGGGTGTACCGGCGTTGAAGAGGGTCGGCGAAGCGTGTGTGAAGAACTTGCTCGAC 139644 Query 139846 ATCAATTCGTACGTTTCGATG--GCGCTC-ACAATATCCCTTCCGTGGATACCGACAGAG 139902 || | | ||| || || ||| ||||| || | || ||| ||| ||||| | Sbjct 139643 ATGAGGTTGTATGTCTCAATGACTCGCTCGACGTTGTC---TCCCCAGATGCCGACGGCA 139587 Query 139903 ACTCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtttttttCAGATA- 139961 || ||||| | ||| || || || ||| | | | ||| |||| || ||||| Sbjct 139586 ACGCGCATGATCATGTGCTGTGGACGCTCGACGATCTTGCCATCGAGCTTCAGGAGATAC 139527 Query 139962 -ACCGTTCTCTAGGGTCTTGTAGCCAAAGTACCTATAGTTGAAATC 140006 |||| ||| || |||||| ||||||||||| |||||||| || Sbjct 139526 GACCG--CTCAAGCGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTC 139483 >seq32 Length=147543 Score = 107 bits (118), Expect = 2e-18 Identities = 164/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || ||||| || || || || ||||||||||| || ||| | | Sbjct 71234 ATGCAGATTTTCGTCAAGACGCTCACAGGAAAGACGATTACGCTCGAGGTGGAATCTTCG 71293 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | || | || || ||||| || ||||| || || || || || ||||| Sbjct 71294 GACACAATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCGCCTGATCAG 71353 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTATA 24881 || ||| | ||||| || || || ||| |||||||| ||| || | |||| || || | Sbjct 71354 CAGCGTCTCATCTTCGCGGGCAAGCAGTTGGAGGATGGTCG-GACTC-TGTCTGACTACA 71411 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 | || || ||||| ||||| ||||||||| |||| | || || ||| Sbjct 71412 ATATCCAGAAGGAGAGCACACTGCACTTGGTGCTGCGTCTCCGTGGTGGC 71461 >seq20 Length=161045 Score = 93.3 bits (102), Expect = 4e-14 Identities = 134/189 (71%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 24705 TGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCG 24764 |||||||||| | || || || || ||||| ||||| || ||||| || || || | | Sbjct 65655 TGCAGATCTTCGTGAAGACCCTCACGGGTAAGACTATCACCCTCGAGGTCGAGTCCTCGG 65596 Query 24765 ACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAAC 24824 | || | || | || || |||||||| ||||| || || || || || || || | Sbjct 65595 ATACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCAGC 65536 Query 24825 AACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACA 24884 | || ||||||||||||| || ||||| ||||| | | | | || || || |||| Sbjct 65535 AGCGCCTGATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGTACCCTCTCTGACTACAACA 65476 Query 24885 TTCAAAAGG 24893 ||||||||| Sbjct 65475 TTCAAAAGG 65467 >seq177 Length=70791 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || ||||| || || || || || | | | Sbjct 29615 ATGCAGATCTTCGTGAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC 29556 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || ||||| || Sbjct 29555 GACACCATCGACAATGTCAAGTCTAAGATCCAGGACAAGGAGGGCATCCCGCCCGACCAG 29496 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || | ||||||||||| || ||||| |||||| | | | || || |||||| Sbjct 29495 CAGCGCCTAATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGGACTCTCTCCGACTATAAC 29436 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| || || ||| | ||| | || |||| || || Sbjct 29435 ATCCAGAAGGAGAGCACCCTCCACCTTGTGCTCCGCCTGCGTGGTGG 29389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449893078529120