Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09] 804 sequences; 36,704,944 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq12 165 1e-34 seq283 93.3 7e-13 seq373 91.5 2e-12 seq330 89.7 8e-12 seq325 89.7 8e-12 seq67 86.0 1e-10 >seq12 Length=176190 Score = 165 bits (182), Expect = 1e-34 Identities = 341/508 (67%), Gaps = 21/508 (4%) Strand=Plus/Minus Query 2073537 GCACTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTT 2073596 || ||||||||| || | ||||| | ||| |||||||| |||||||| | | |||||| Sbjct 139932 GCCCTGGTCGACGTACCTGGCCGTATTGTTGAAGACGCGCAGCATGGGAATGATGCCGTT 139873 Query 2073597 GGACTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAA 2073656 ||| ||||| ||||| || | ||||| ||| | ||| || | ||| | | Sbjct 139872 GGAGGTACCGTTTGTGCCGGCGATGTAGGAGCCGGTGGCACGGATGCGGTGGATGTTCAG 139813 Query 2073657 GCCGATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCC 2073716 ||| |||||||||||| ||||||||| | ||||| | || ||||| ||||||||||| Sbjct 139812 GCCAATGCCGCCGGCCATCTTGGAGATCATGGCGCAAGTCTTGAGCGTGTCGTAGATGCC 139753 Query 2073717 CTCGATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGT 2073776 |||||| ||| |||||||||| | ||| ||||| |||||| || | | | || Sbjct 139752 CTCGATGCTGTCATCCTTCATGTCGACCAGGAAGCAGGACGAGAGCTGGGCCTGGGGTGT 139693 Query 2073777 GCCGGCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACATGGCCTCGTA 2073836 ||||| |||||||| || |||| || ||| | ||| |||||| | ||| Sbjct 139692 ACCGGCGTTGAAGAGGGTCGGCGAAGCGTGTGTGAAGAACTTGCTCGACATGAGGTTGTA 139633 Query 2073837 GGTGGCGAGCACGCGCGCCAGCGCGTCTTGGACGTCGGCAAACCCATAGTGGCCGATGGC 2073896 || | | || ||| | ||||| | | || || ||||| ||| Sbjct 139632 TGTCTCAATGACTCGC------------TCGACGTTGTC---TCCCCAGATGCCGACGGC 139588 Query 2073897 GACGCGCATGATCATGTACTGGGGTCGCTCGACGA---CGGCGTCGCGCACCTTGGTCAG 2073953 |||||||||||||||| ||| || |||||||||| | | ||| | ||| || Sbjct 139587 AACGCGCATGATCATGTGCTGTGGACGCTCGACGATCTTGCCATCG---AGCTTCAGGAG 139531 Query 2073954 GTAGGACCGACGCAGGGTCGCCAGGCCAAAGTACGAGTAGGCCAGGTCGCGCTCGTGGCG 2074013 || ||||| || ||| | |||||||||| |||| | ||| || || | Sbjct 139530 ATACGACCGCTCAAGCGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCCCGATCATATAC 139471 Query 2074014 GATGGCGGCGTCGAGGGCCTCCTTGTGC 2074041 |||||| | |||||| | ||||||||| Sbjct 139470 GATGGCCGAGTCGAGCTCTTCCTTGTGC 139443 >seq283 Length=47698 Score = 93.3 bits (102), Expect = 7e-13 Identities = 86/109 (79%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 || || ||||| |||||||||||| | || || || | || |||||||| || ||||| Sbjct 8824 GCTGCAAACTATCTCGACATCAAGGCACTTCTGGACGTCGGCTGCAAGACAGTTGCCAAT 8765 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCA 2035755 | |||||||||||||| || ||||| ||||| || || || ||||||| Sbjct 8764 ATGATCAAGGGCAAGTCTCCGGAGGAGATCCGGAAAACTTTCAACATCA 8716 >seq373 Length=33999 Score = 91.5 bits (100), Expect = 2e-12 Identities = 127/175 (73%), Gaps = 5/175 (3%) Strand=Plus/Plus Query 653961 CGGGCGAGCCCATGGAGGCGTTGATCTTTTCGGCG--CCGGTCTACTACCAGGCCCTGCG 654018 |||||||| | |||| || |||| ||| || || ||||||||||| ||| Sbjct 18030 CGGGCGAGTCGCACGAGGTGT--ATCTCTTCAACGGACCCATCTACTACCAGCGGCTGAA 18087 Query 654019 CCACGTGGCCATCGACAAGATCCACGCCCGGCCGCGCGGCCCCGTGCAGATGCTCACCAA 654078 ||| ||| |||||||| ||| | ||| |||| |||||| || || ||||| Sbjct 18088 GCACATGGTACAGGACAAGATGCACTCGCGGTCGCGGGGCCCCNGGCC-ATCCTCACGCG 18146 Query 654079 GCAGCCGGTCGAGGGCCGGTCGCGCTCGGGCGGCTTTCGCCTCGGAGAGATGGAG 654133 ||||||| ||||||||| |||||| |||||| | |||||||||||||||||| Sbjct 18147 GCAGCCGACCGAGGGCCGCTCGCGCGATGGCGGCCTGCGCCTCGGAGAGATGGAG 18201 >seq330 Length=39778 Score = 89.7 bits (98), Expect = 8e-12 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 ||||||||||||||||||||| ||||| || || |||||| | |||| ||||| ||| Sbjct 17910 GTACTTGGTGACGGCCTTGGTGCCCTCAGACACAGCGTGCTTAGCCAACTCGCCCGGCAG 17851 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGG 1485562 ||| || || || | |||||||||||||||| Sbjct 17850 GATGAGACGGACCGAAGTCTGGATCTCGCGGG 17819 >seq325 Length=40494 Score = 89.7 bits (98), Expect = 8e-12 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 ||||||||||||||||||||| ||||| || || |||||| | |||| ||||| ||| Sbjct 33012 GTACTTGGTGACGGCCTTGGTGCCCTCAGACACAGCGTGCTTAGCCAACTCGCCCGGCAG 32953 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGG 1485562 ||| || || || | |||||||||||||||| Sbjct 32952 GATGAGACGGACCGAAGTCTGGATCTCGCGGG 32921 >seq67 Length=117402 Score = 86.0 bits (94), Expect = 1e-10 Identities = 124/174 (71%), Gaps = 6/174 (3%) Strand=Plus/Minus Query 429567 AACCGGCAGCCGTCGCTCCACATGGGGTCGATGCTCAACCACAAGGTG---GTGCCCATG 429623 ||||| |||||||| || |||| || ||| ||| | |||| ||| ||| ||| Sbjct 58342 AACCGACAGCCGTCTCTGCACAAGGAGTCTATGATGGGTCACAGGGTCCGCGTG---ATG 58286 Query 429624 CCCGGTCGCACCTTCCGGCTCAACCTGGCCGTGACGGGCACCTACAACGCCGACTTTGAC 429683 || | ||| || || || |||||| | || ||| | ||||||||||| || ||| Sbjct 58285 CCTTATTCCACGTTTCGTCTTAACCTGTCTGTCACGTCTCCTTACAACGCCGATTTCGAC 58226 Query 429684 GGCGACGAGATGAACCTGCACGTGCCCCAGTCGGAGATGGCACGCGCCGAAGTC 429737 || |||||||||||| |||||||||| ||| | ||| | || ||||| ||| Sbjct 58225 GGTGACGAGATGAACTTGCACGTGCCTCAGACTGAGGAAACGCGTGCCGAGGTC 58172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916160874852956