Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09] 804 sequences; 36,704,944 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq177 145 5e-30 seq20 116 2e-21 seq32 105 4e-18 >seq177 Length=70791 Score = 145 bits (160), Expect = 5e-30 Identities = 165/219 (75%), Gaps = 8/219 (4%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||| | ||||||||||||||| ||||||||||| || || | || |||| Sbjct 29404 AGCACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTATAGTCGGAGAGAGTCCGGCCATCC 29463 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||| ||||| || || |||||||| |||| | ||||||||||| Sbjct 29464 TCGAGCTGCTTGCCGGCAAAGATTAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCC 29523 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || ||||| || | ||||| || | | ||| || |||| ||| || Sbjct 29524 TGGATCTTAGACTTGAC--AT--TGTCGATGGTGTCGCTCGACTCCACCTCAAGGGTGAT 29579 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980 ||||| |||||||||||||| || |||||||||||||| Sbjct 29580 AGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCATGAT 29618 >seq20 Length=161045 Score = 116 bits (128), Expect = 2e-21 Identities = 143/193 (74%), Gaps = 8/193 (4%) Strand=Plus/Plus Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847 |||| |||||||| ||||| || ||| | || | || || || ||||| ||||| |||| Sbjct 65467 CCTTTTGAATGTTGTAGTCAGAGAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCAAAGA 65526 Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907 |||| || ||||||||| | || | ||||||||||| | || || ||||| || Sbjct 65527 TCAGGCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGAC--AT- 65583 Query 34908 CTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963 | ||||| || || |||||| || | ||| || ||||| |||||||||||||| Sbjct 65584 -TGTCGATGGTATCCGAGGACTCGACCTCGAGGGTGATAGTCTTACCCGTGAGGGTCTTC 65642 Query 34964 ACAAAGATCTGCA 34976 || |||||||||| Sbjct 65643 ACGAAGATCTGCA 65655 >seq32 Length=147543 Score = 105 bits (116), Expect = 4e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | |||||||||||||| ||||| ||||| || ||| | || | || Sbjct 71217 AGAACCAAGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGTCCGACCGTCC 71158 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| ||||| || |||||||| || || || || || |||| | ||||||||||| Sbjct 71157 TCCAACTGCTTGCCCGCGAAGATGAGACGCTGTTGATCAGGCGGGATGCCCTCCTTGTCC 71098 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || ||| ||||||| | || | || || ||| || || | || || ||| Sbjct 71097 TGGATCTTTGATTTGACGTTGTCAATGGTGTCCGAGGACTCCACCTCCAACGTGATCGTC 71038 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || || || ||||| || || || |||||| Sbjct 71037 TTGCCAGTCAGAGTCTTGACGAAAATTTGCATG 71005 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| |||| ||| | |||||||||||||| || || ||||| || || | || |||| Sbjct 71446 CAGCACCAAGTGCAGTGTGCTCTCCTTCTGGATATTGTAGTCAGACAGAGTCCGACCATC 71387 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 |||| ||||| || |||||||| || || ||||| || |||| | ||||||||||| Sbjct 71386 CTCCAACTGCTTGCCCGCGAAGATGAGACGCTGCTGATCAGGCGGGATGCCCTCCTTGTC 71327 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || || |||||| | || | || | || || || | || || || Sbjct 71326 CTGAATCTTGGACTTGACGTTGTCAATTGTGTCCGAAGATTCCACCTCGAGCGTAATCGT 71267 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||| ||||| ||||| || || |||||||| Sbjct 71266 CTTTCCTGTGAGCGTCTTGACGAAAATCTGCAT 71234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325689608617676