Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09] 804 sequences; 36,704,944 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq12 205 9e-48 seq32 87.8 2e-12 >seq12 Length=176190 Score = 205 bits (226), Expect = 9e-48 Identities = 984/1539 (64%), Gaps = 43/1539 (3%) Strand=Plus/Minus Query 146893 TTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAAGGC 146952 ||||| ||||| |||||||| || |||||||||| | || | |||| ||| ||||| Sbjct 140981 TTGACGACTTGGAACTCGCCGGCAAGCACACGTCGCTGGTAAATATTGGACGTGTAAGGC 140922 Query 146953 TCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCACC 147012 || || | || || ||||| || || || | |||| || || |||||| || | | Sbjct 140921 TCGAAGCATTCGTTGTTGCCCAAGATCTGCGAGGTGGAGGCAGTCGGCATGGGAGCGAGC 140862 Query 147013 AACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTGCCAGTCCCAC 147072 | || || || | || | | | ||| ||| |||| | || | ||| |||||| Sbjct 140861 AGCAGACTGTTCCGGACGCCATGCTCCTTGATCTTGGCCTTGAGAGCGTCCCAATCCCAC 140802 Query 147073 ATCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGGGACTG 147132 | | ||| | ||||||||||||||||||||||| | || | | | ||| Sbjct 140801 AGGCTGGTCGGCTTGACGTTCCACATGTCGTACTGGAGGATACCCTGGGAGACAGGAGAT 140742 Query 147133 CCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAATTCACAGCTTGCCTCGAGCGCT 147192 || || | || | ||| || | || || | || || ||| | ||| Sbjct 140741 CCTTCGTATGTCGGGTACGGGCCTTGCTCCTTGGCGAGGTCGCACGAAGCCGTCAACGCC 140682 Query 147193 CCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGG--ACGGTCGCTTCTTCGCTCTCGT 147250 ||| ||| ||||||||| ||| || ||||| || |||| || || |||| Sbjct 140681 GCATGGTAGATGGTTTCGAAGATCTGCTTGTTCAGCTCACGG--GCCTCGGGAGACTCGA 140624 Query 147251 AAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGGTC 147310 ||||||| || || || |||||||| || | |||||| | ||||||||||| || | Sbjct 140623 AAGGCATCCGGAGCGCCAAGAAGGCATCCGCGAGACCCTGAACGCCGACGCCGATGGGGC 140564 Query 147311 GATGCTTTTCGTTGCTGCGCTTCGCGCTCGCT-ATGGGATAGTGGTTGCGATCAATAATC 147369 | || |||||| || ||| | | || ||||||||| || || ||| Sbjct 140563 GGTGGCGCGTGTTGCTATTGAAAGC-CTCCTTGACCGGGTAGTGGTTGACGTCGATGATC 140505 Query 147370 TTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCATAAGTC 147429 ||||| || || || || || || | ||| | | || |||| |||||| || Sbjct 140504 TTGTTCAGATTGCGGACGACCACCTGAGTGACCTCATGCAGCTTCTGGAAATCGTAGACA 140445 Query 147430 CCGTCTTCGACACGTACGCATTGGTTCACGGCGATAGACGCCAGATTGCAGACGGCCGTC 147489 || || | | | ||| | || | || | || |||| ||||||||||| | Sbjct 140444 CCTTCGTTGTAATCCACGAACTGAGGAAGTGCCAAGGAGGCCAAGTTGCAGACGGCAACC 140385 Query 147490 TCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTG---CTGCATTTTATGACT 147546 || |||| | ||||| | |||||| | ||| |||||| |||| || || Sbjct 140384 TCATCGGGAGCAGAGTACTCGATGATTTCAGTGCAGAGGTTGGAGCTGCGAATTGTG--- 140328 Query 147547 CCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCG 147606 |||| || | ||| ||||| ||||| ||||| || ||| |||||||| | || | Sbjct 140327 CCCAGGTTCTTCTGGTTGCTCTTCCGGTTGCAATGATCCTTGTAGAGCATGAAGGGGTTG 140268 Query 147607 CCGGTCTCGACTTGCGTTTCAACGAT---AAACCTATGCAGGTCCTGCGCTCGCACCCGC 147663 || |||||| || | || | ||| | ||| || || | ||| || ||| | Sbjct 140267 CCAGTCTCGGTCTGAGCCTCGAGGATGGCATACC-AT--AGCTTCTGGGCCTTGACCGTC 140211 Query 147664 TGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTCGCCGTAG 147723 | || |||| |||| || |||||| |||||| | ||||||||| ||||||||| Sbjct 140210 TTGCGTCCGCGGTCCTCCTTCTCGTACTTCTCGTATAGAGCCTCAAACTCTTCGCCGTAG 140151 Query 147724 CAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTCGTCCGCGTTA 147783 || ||||| || ||||| |||| || || ||||| |||| |||| ||| | | | Sbjct 140150 CAGTCGGCGAGACCGGGGCACTCATTGGGGCACATGAGCGTCCACTCCCCGTTCTTCTCA 140091 Query 147784 ACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGCGCGCTTTGCAA 147843 ||||| ||| || |||||||| | ||||| || | || ||||| || ||| Sbjct 140090 ACGCGCTTCATGAAAAGATCCGGGATCCACAAAGCAAGGAAGAGGTCGCGAGC-ACGCA- 140033 Query 147844 TCCTCGGC--GCCCATGTTGCGTTTC--AAATTAAG-CACGCTATAGATGTCGGCGTGCC 147898 |||| | || || | | || | | | || || | | ||| ||||| |||| Sbjct 140032 -CCTCTTCCTTACCGTGGTTC-TTCCGGAGGTCCAGAAACTCGA-AGACATCGGCATGCC 139976 Query 147899 AGGGTTCAATGTAGACGGCCAGCGCACCTTTACGC---TTTCCGCCCTGGTCGACATGGC 147955 | || |||| || | ||| | || || |||| || |||||||||||||| | | Sbjct 139975 AAGGCTCAAGATATATGGCAAAGGCGCCGGGACGCTTGTTGCCGCCCTGGTCGACGTACC 139916 Query 147956 GCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCCGTTGGTGG 148015 || | ||||| || ||||||| |||||| | |||| | | || ||||| ||| Sbjct 139915 TGGCCGTATTGTTGAAGACGCGCAGCATGGGAATGATGCCGTTGGAGGTACCGTTTGTGC 139856 Query 148016 AATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAATGCCGCCGCCGT 148075 ||| | | |||| ||| || | ||| | ||| | ||||||||||||| | Sbjct 139855 CGGCGATGTAGGAGCCGGTGGCACGGATGCGGTGGATGTTCAGGCCAATGCCGCCGGCCA 139796 Query 148076 ACTTTGATATGGCAGCGCAA---TCGCCCAATGTCGTGTAGATGCCGTCGATGCTGTCGT 148132 ||| || || |||||| | | | |||| ||||||||| ||||||||||| | Sbjct 139795 TCTTGGAGATCATGGCGCAAGTCTTGAGC-GTGTC--GTAGATGCCCTCGATGCTGTCAT 139739 Query 148133 TTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCCGCCGAGAAAA 148192 || | | | | || || || || | | || | | || || || ||| | Sbjct 139738 CCTTCATGTCGACCAGGAAGCAGGACGAGAGCTGGGCCTGGGGTGTACCGGCGTTGAAGA 139679 Query 148193 GGGTGGGACTCGCGTGCGTAAACAATTT--TTGACTCATCATGCGATACGTCTCAATAGC 148250 |||| || ||||| || || || || | || ||| | | || |||||||| | Sbjct 139678 GGGTCGGCGAAGCGTGTGTGAAGAACTTGCTCGA--CATGAGGTTGTATGTCTCAATGAC 139621 Query 148251 GTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGTGGTCG 148310 |||| || ||| || ||||| | || |||||||||| |||||||||||| || Sbjct 139620 TCGCTCGACGTTGTCTCCCCAGATGCCGACGGCAACGCGCATGATCATGTGCTGTGGACG 139561 Query 148311 TTCGGC-AACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTGTAACCAA 148369 ||| | | |||| | || ||| || ||||| || || || ||| | |||| Sbjct 139560 CTCGACGATCTTG-CCATCGAGCTTCAGGAGATACGACCGCTCAAGCGTCTTGAAGCCAA 139502 Query 148370 AGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGCCG 148408 |||||| ||| | || || | || || ||||||||| Sbjct 139501 AGTACTGGTAGTTGAAGTCCCGATCATATACGATGGCCG 139463 >seq32 Length=147543 Score = 87.8 bits (96), Expect = 2e-12 Identities = 135/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 131932 CTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAATA 131991 ||| || || |||||||||||| || ||| || || || | ||| || || | | Sbjct 71197 CTCCTTCTGGATGTTGTAGTCGGACAGGGTCCGACCGTCCTCCAACTGCTTGCCCGCGAA 71138 Query 131992 GATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAACTG 132051 ||| |||||||||||||| || || ||||| || || || || ||| ||| | | Sbjct 71137 GATGAGACGCTGTTGATCAGGCGGGATGCCCTCCTTGTCCTGGATCTTTGATTTGACGTT 71078 Query 132052 TTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAT 132111 || | || || | | |||||| || | ||| | ||| || ||||||||||| || | Sbjct 71077 GTCAATGGTGTCCGAGGACTCCACCTCCAACGTGATCGTCTTGCCAGTCAGAGTCTTGAC 71018 Query 132112 GAAAATCTGCATG 132124 |||||| |||||| Sbjct 71017 GAAAATTTGCATG 71005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476606410057440