Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09] 804 sequences; 36,704,944 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq183 158 1e-33 >seq183 Length=69340 Score = 158 bits (174), Expect = 1e-33 Identities = 276/402 (69%), Gaps = 10/402 (2%) Strand=Plus/Minus Query 147106 ACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGG 147165 ||||| |||||| | |||||||| ||||| ||| |||| ||||||||| || ||| Sbjct 63296 ACGTAGAACTGGGCAAACATGTGGCATGGCGGAAGCACCATCTTGGGCAGGTCGGCTGGG 63237 Query 147166 TTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAACC 147225 ||||| ||||||| || ||||||| | ||||||| |||| | | ||| | Sbjct 63236 TTCCACGCCGAGAGGACGAGCCGCCGGTCGAAGGGGTTCGTCTTGAGGGTGTGGATGATG 63177 Query 147226 CACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGGCC 147285 | | ||||||||| |||||||||||| ||||| ||| | ||| ||||| || Sbjct 63176 CGCGCCAGCTGGTCGACGCCCTGGCCCGAGTAGTCCGTCTTGGCGTCGACGTAGTCAGCG 63117 Query 147286 CCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAG 147345 |||||||| | ||||||||||||||| || || ||||| || || | || ||| | Sbjct 63116 CCAAAGTGTCGCCACTGGAAGCCGTAGACGGGGCCCAGATCCCCCGTCT-----CGCGCG 63062 Query 147346 AAGCCCGCCCG-----CTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTC 147400 | | | | ||| | ||| |||||| | || |||| | | |||||||| ||| | Sbjct 63061 ACGTCAGTCCGAGGTTGTCGAGGAACTCGCGTGAGCCGTTGCCATCCCAGATCTTCACCC 63002 Query 147401 CCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCA 147460 | | || ||| ||| || ||| ||| |||| ||||||||||| ||||| | | Sbjct 63001 CTTGGGAGGACAGCGACTGCGAGGAGGTGTCGCCCGATATGAACCAGAGGAGCTCGGCAA 62942 Query 147461 AAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGGA 147502 ||| | | |||||| | ||| || || || || |||| Sbjct 62941 TAACAGCTTTGGTAAAGACGCGCTTCGTCGTGAGGAGCGGGA 62900 Score = 122 bits (134), Expect = 1e-22 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 146872 ATCTTGAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACG 146931 |||| ||| | ||||||| ||||| | | | ||||||| | | |||| | || Sbjct 63638 ATCTCGAGTTCGGGGAAGTCGCGGGGCTCGCGGCCCAGCTGCGTCTCGAGGGCGGCGACA 63579 Query 146932 TGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCG 146991 ||||| |||||||| || ||||| |||| | |||| | | ||||| | ||| Sbjct 63578 TGGTTCAGGTAGACATGGGCGTCACCCATGACGTGCGTCAGGCTGCCCGGGACCAACCCG 63519 Query 146992 GTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCC 147051 |||||| |||||||||| || ||||||| ||||||||| |||||||| || || ||| Sbjct 63518 CACACGTGCGCCACCATGTGTGTCAGCAGCGCGTAGCTGGCGATGTTGAACGGCACGCCC 63459 Query 147052 AGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCA 147086 || |||||||| | || | |||||||||||| || Sbjct 63458 AGCCCCATGTCACAGGAACGCTGGTACAGCTGACA 63424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583482135945600