Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09] 804 sequences; 36,704,944 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq12 163 4e-34 seq442 86.0 9e-11 >seq12 Length=176190 Score = 163 bits (180), Expect = 4e-34 Identities = 347/510 (68%), Gaps = 25/510 (5%) Strand=Plus/Plus Query 259681 GCACAAGGAGGTCCTCGACGCTGCCATCTGCCACGGCCGAGACTTTGGCTACTCGTACTT 259740 ||||||||| | |||||| | |||||| | | || ||||| |||| |||||| Sbjct 139443 GCACAAGGAAGAGCTCGACTCGGCCATCGTATATGATCGGGACTTCAACTACCAGTACTT 139502 Query 259741 TGGTCTGGCGAC-CTTGCGCCGGTCCTACCTGACCAAAGTGCGCGAT---ATTGTCGTCG 259796 ||| | ||| |||| || |||| || || || || |||| | |||||| Sbjct 139503 TGGCTTCAAGACGCTTGAGC-GGTCGTATCTCCTGAA---GCTCGATGGCAAGATCGTCG 139558 Query 259797 AGCGGCCCCAGTATATGCTCATGCGTGTCGCCCTTGGCCATTATGGGTTTGCCGACGTCG 259856 |||| || ||| | ||| ||||||| || ||| | ||| | |||| || | Sbjct 139559 AGCGTCCACAGCACATGATCATGCGCGTTGCCGTCGGCA--TCTGGG------GA----G 139606 Query 259857 ACAATGCGCTGGAGCACGTGCTCGCCACCTACGAGGCCATGTCGCAGCA-GTTGTTCACC 259915 |||| | | |||| || | | || ||| | ||||||| |||| ||| ||||| Sbjct 139607 ACAACG---TCGAGCGAGTCATTGAGACATACAACCTCATGTCG-AGCAAGTTCTTCACA 139662 Query 259916 TCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTT 259975 || |||| || ||||| || ||||| || || | | ||| ||||| ||||| Sbjct 139663 CACGCTTCGCCGACCCTCTTCAACGCCGGTACACCCCAGGCCCAGCTCTCGTCCTGCTTC 139722 Query 259976 CTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCG 260035 ||| | |||||||||| || |||||||||||||| |||||||||||| ||||| Sbjct 139723 CTGGTCGACATGAAGGATGACAGCATCGAGGGCATCTACGACACGCTCAAGACTTGCGCC 139782 Query 260036 CTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGC 260095 | ||||||||| |||||||||||| || | | ||| | || ||| | ||| Sbjct 139783 ATGATCTCCAAGATGGCCGGCGGCATTGGCCTGAACATCCACCGCATCCGTGCCACCGGC 139842 Query 260096 GCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTT 260155 ||||| | || ||||| ||||| ||||||||| | | |||||||| ||||| || Sbjct 139843 TCCTACATCGCCGGCACAAACGGTACCTCCAACGGCATCATTCCCATGCTGCGCGTCTTC 139902 Query 260156 AACGACACGGCGCGCTACGTCGACCAGTGC 260185 ||| | ||||| | |||||||||||| || Sbjct 139903 AACAATACGGCCAGGTACGTCGACCAGGGC 139932 >seq442 Length=25121 Score = 86.0 bits (94), Expect = 9e-11 Identities = 77/97 (79%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 165768 GGCGCCGTCGGTGCGCGCACCACCGAGAGCCAGGTGCACCGCGAGATGGCGTCGGCGCTG 165827 |||||| |||| ||||| ||||||||||||||| ||||||| ||| |||| || | || Sbjct 1671 GGCGCCATCGGAGCGCGGACCACCGAGAGCCAGCTGCACCGAGAGCTGGCCTCTGGCTTG 1730 Query 165828 CCGCTGCCCATTGGCTTCAAAAACAGCACCGACGGCA 165864 | | || |||||||||| ||| | |||||||||| Sbjct 1731 TCCTTCCCGGTTGGCTTCAAGAACGGGACCGACGGCA 1767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177733652722248