Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09]
804 sequences; 36,704,944 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq12 163 4e-34
seq442 86.0 9e-11
>seq12
Length=176190
Score = 163 bits (180), Expect = 4e-34
Identities = 347/510 (68%), Gaps = 25/510 (5%)
Strand=Plus/Plus
Query 259681 GCACAAGGAGGTCCTCGACGCTGCCATCTGCCACGGCCGAGACTTTGGCTACTCGTACTT 259740
||||||||| | |||||| | |||||| | | || ||||| |||| ||||||
Sbjct 139443 GCACAAGGAAGAGCTCGACTCGGCCATCGTATATGATCGGGACTTCAACTACCAGTACTT 139502
Query 259741 TGGTCTGGCGAC-CTTGCGCCGGTCCTACCTGACCAAAGTGCGCGAT---ATTGTCGTCG 259796
||| | ||| |||| || |||| || || || || |||| | ||||||
Sbjct 139503 TGGCTTCAAGACGCTTGAGC-GGTCGTATCTCCTGAA---GCTCGATGGCAAGATCGTCG 139558
Query 259797 AGCGGCCCCAGTATATGCTCATGCGTGTCGCCCTTGGCCATTATGGGTTTGCCGACGTCG 259856
|||| || ||| | ||| ||||||| || ||| | ||| | |||| || |
Sbjct 139559 AGCGTCCACAGCACATGATCATGCGCGTTGCCGTCGGCA--TCTGGG------GA----G 139606
Query 259857 ACAATGCGCTGGAGCACGTGCTCGCCACCTACGAGGCCATGTCGCAGCA-GTTGTTCACC 259915
|||| | | |||| || | | || ||| | ||||||| |||| ||| |||||
Sbjct 139607 ACAACG---TCGAGCGAGTCATTGAGACATACAACCTCATGTCG-AGCAAGTTCTTCACA 139662
Query 259916 TCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTT 259975
|| |||| || ||||| || ||||| || || | | ||| ||||| |||||
Sbjct 139663 CACGCTTCGCCGACCCTCTTCAACGCCGGTACACCCCAGGCCCAGCTCTCGTCCTGCTTC 139722
Query 259976 CTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCG 260035
||| | |||||||||| || |||||||||||||| |||||||||||| |||||
Sbjct 139723 CTGGTCGACATGAAGGATGACAGCATCGAGGGCATCTACGACACGCTCAAGACTTGCGCC 139782
Query 260036 CTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGC 260095
| ||||||||| |||||||||||| || | | ||| | || ||| | |||
Sbjct 139783 ATGATCTCCAAGATGGCCGGCGGCATTGGCCTGAACATCCACCGCATCCGTGCCACCGGC 139842
Query 260096 GCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTT 260155
||||| | || ||||| ||||| ||||||||| | | |||||||| ||||| ||
Sbjct 139843 TCCTACATCGCCGGCACAAACGGTACCTCCAACGGCATCATTCCCATGCTGCGCGTCTTC 139902
Query 260156 AACGACACGGCGCGCTACGTCGACCAGTGC 260185
||| | ||||| | |||||||||||| ||
Sbjct 139903 AACAATACGGCCAGGTACGTCGACCAGGGC 139932
>seq442
Length=25121
Score = 86.0 bits (94), Expect = 9e-11
Identities = 77/97 (79%), Gaps = 0/97 (0%)
Strand=Plus/Plus
Query 165768 GGCGCCGTCGGTGCGCGCACCACCGAGAGCCAGGTGCACCGCGAGATGGCGTCGGCGCTG 165827
|||||| |||| ||||| ||||||||||||||| ||||||| ||| |||| || | ||
Sbjct 1671 GGCGCCATCGGAGCGCGGACCACCGAGAGCCAGCTGCACCGAGAGCTGGCCTCTGGCTTG 1730
Query 165828 CCGCTGCCCATTGGCTTCAAAAACAGCACCGACGGCA 165864
| | || |||||||||| ||| | ||||||||||
Sbjct 1731 TCCTTCCCGGTTGGCTTCAAGAACGGGACCGACGGCA 1767
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177733652722248
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |