Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09] 804 sequences; 36,704,944 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq177 116 3e-21 seq20 107 2e-18 seq32 102 7e-17 >seq177 Length=70791 Score = 116 bits (128), Expect = 3e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 35540 GTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCC 35599 || |||||||| || ||||| || |||| | || || | || || |||||||| || Sbjct 29419 GTGCTCTCCTTCTGGATGTTATAGTCGGAGAGAGTCCGGCCATCCTCGAGCTGCTTGCCG 29478 Query 35600 GCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTC 35659 ||||| || | ||||||||||| | || | || |||||||||| |||||| ||| Sbjct 29479 GCAAAGATTAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTAGACTTG 29538 Query 35660 AGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTT 35719 | | | | | ||||||||||| |||||||| | ||||| || || ||||| | || Sbjct 29539 ACATTGTCGATGGTGTCGCTCGACTCCACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTC 29598 Query 35720 TTCACAAATATCTGCAT 35736 ||||| || |||||||| Sbjct 29599 TTCACGAAGATCTGCAT 29615 >seq20 Length=161045 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 35539 CGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACC 35598 || ||| |||||||||||||||| || | | ||| || |||| || |||||||| || Sbjct 65459 CGAACTGACCTTTTGAATGTTGTAGTCAGAGAGGGTACGGCCGTCCTCGAGCTGCTTGCC 65518 Query 35599 CGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTT 35658 ||||| |||| ||||||||||| | || | || |||||||||| |||||| ||| Sbjct 65519 GGCAAAGATCAGGCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTT 65578 Query 35659 CAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGT 35718 | | | | | || || || || ||||| | ||||| || |||||||| | || Sbjct 65579 GACATTGTCGATGGTATCCGAGGACTCGACCTCGAGGGTGATAGTCTTACCCGTGAGGGT 65638 Query 35719 TTTCACAAATATCTGCA 35735 ||||| || ||||||| Sbjct 65639 CTTCACGAAGATCTGCA 65655 >seq32 Length=147543 Score = 102 bits (112), Expect = 7e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | || |||||| || | || |||||||| || || ||||| || | | Sbjct 71460 CCACCACGGAGACGCAGCACCAAGTGCAGTGTGCTCTCCTTCTGGATATTGTAGTCAGAC 71401 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || |||| |||||| ||||| || || | |||||||| || | || Sbjct 71400 AGAGTCCGACCATCCTCCAACTGCTTGCCCGCGAAGATGAGACGCTGCTGATCAGGCGGG 71341 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACC-GTGTCGCTCGATTCCAC 35688 | || |||||||||| ||||| ||| | |||| || ||||| |||||||| Sbjct 71340 ATGCCCTCCTTGTCCTGAATCTTGGACTTGAC-GTTGTCAATTGTGTCCGAAGATTCCAC 71282 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| | ||| ||||| || || || | || || || || |||||||| Sbjct 71281 CTCGAGCGTAATCGTCTTTCCTGTGAGCGTCTTGACGAAAATCTGCAT 71234 Score = 86.0 bits (94), Expect = 6e-12 Identities = 121/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || || |||||||| | | ||| || | || || |||||||| ||||| || Sbjct 70969 CTCCTTCTGGATATTGTAATCCGAGAGGGTACGACCATCCTCGAGCTGCTTGCCCGCGAA 70910 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||| | |||| | |||||| ||| ||||| ||| | | | Sbjct 70909 AATCAGGCGCTGCTGGTCAGGCGGAATACCCTCCTTATCCTGAATCTTCGACTTGACATT 70850 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCA 35714 | | || ||| |||||||||||| | ||||| || || || |||| Sbjct 70849 ATCGATGGTATCGGACGATTCCACCTCGAGGGTGATGGTCTTTCCGGTCA 70800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450789069524320