Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09] 804 sequences; 36,704,944 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq32 116 4e-21 seq12 111 2e-19 seq20 98.7 1e-15 >seq32 Length=147543 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| |||| ||| | ||| || ||| ||||| || || |||||||| Sbjct 71460 CCACCACGGAGACGCAGCACCAAGTGCAGTGTGCTCTCCTTCTGGATATTGTAGTCAGAC 71401 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || || || || | ||| ||||| || || || | |||||||||||| ||||| Sbjct 71400 AGAGTCCGACCATCCTCCAACTGCTTGCCCGCGAAGATGAGACGCTGCTGATCAGGCGGG 71341 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || ||||| || ||||| ||| | |||||| || |||||||| Sbjct 71340 ATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATTGTGTCCGAAGATTCCACC 71281 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| ||||| || || || || | || || |||||||| ||||| Sbjct 71280 TCGAGCGTAATCGTCTTTCCTGTGAGCGTCTTGACGAAAATCTGCAT 71234 Score = 111 bits (122), Expect = 2e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || ||| ||||| || |||||||||||| | ||| || ||| || | ||| Sbjct 71209 GTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGTCCGACCGTCCTCCAACTG 71150 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 ||||| || || || | |||||| ||||| ||||| ||||| || || || || || || Sbjct 71149 CTTGCCCGCGAAGATGAGACGCTGTTGATCAGGCGGGATGCCCTCCTTGTCCTGGATCTT 71090 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 | |||||| ||| | ||||| || || ||||| || | || || || || || || Sbjct 71089 TGATTTGACGTTGTCAATGGTGTCCGAGGACTCCACCTCCAACGTGATCGTCTTGCCAGT 71030 Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713 | ||| || |||||||||||||| Sbjct 71029 CAGAGTCTTGACGAAAATTTGCAT 71006 Score = 109 bits (120), Expect = 6e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||||| || ||||| || ||||| || || ||||| || Sbjct 71004 CCACCACGGAGACGAAGGACGAGATGGAGCGTCGACTCCTTCTGGATATTGTAATCCGAG 70945 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| || || |||||||| ||||| || ||||||| |||||||| || ||||| Sbjct 70944 AGGGTACGACCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCAGGCGGA 70885 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || ||||| || ||||| || | || |||||||||||||| Sbjct 70884 ATACCCTCCTTATCCTGAATCTTCGACTTGACATTATCGATGGTATCGGACGATTCCACC 70825 Query 134667 TCGAGAGTAATGGTTTTACCGGT 134689 ||||| || ||||| || ||||| Sbjct 70824 TCGAGGGTGATGGTCTTTCCGGT 70802 >seq12 Length=176190 Score = 111 bits (122), Expect = 2e-19 Identities = 475/745 (64%), Gaps = 7/745 (1%) Strand=Plus/Plus Query 7654 TTTACGCACGCTTCGCCCACCATGTTTGCCGCGGGCACAAACGCGCCTCAATTGTCCTCG 7713 || || ||||||||||| ||| | || ||| || ||| | | | || | || || Sbjct 139657 TTCACACACGCTTCGCCGACCCTCTTCAACGCCGGTACACCCCAGGCCCAGCTCTCGTCC 139716 Query 7714 TGTTTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACAACACGCTGCGCGA- 7772 || || || | |||| || ||||||||||| ||||| ||| ||||||| | || Sbjct 139717 TGCTTCCTGGTCGACATGAAGGATGACAGCATCGAGGGCATCTACGACACGCT-CAAGAC 139775 Query 7773 TTGCGCCAATATTTCCAAATACGGCGGCGGAATAGGTCTGAACGTAAACGACGTGCGCGC 7832 |||||||| || ||||| | |||||| || || |||||| | || | | || || Sbjct 139776 TTGCGCCATGATCTCCAAGATGGCCGGCGGCATTGGCCTGAACATCCACCGCATCCGTGC 139835 Query 7833 CAACGGTAGCCGCATCGTGTCCACCAACGGAAAAGCCAGCGGTTTAGAGCCCATGTTGCG 7892 || ||| | ||||| ||| ||||| | ||| ||| | |||||| |||| Sbjct 139836 CACCGGCTCCTACATCGCCGGCACAAACGGTACCTCCAACGGCATCATTCCCATGCTGCG 139895 Query 7893 CGTGTTCAATAACGCGGTGCGACATGTAGACCAGGGGGG---AAAGCGCAAAGGCGCCGC 7949 ||| ||||| || ||| | | || |||||||| || ||||| |||||| Sbjct 139896 CGTCTTCAACAATACGGCCAGGTACGTCGACCAGGGCGGCAACAAGCGTCCCGGCGCCTT 139955 Query 7950 TGCCATCTATTTGGAGCCGTGGCACGCGGACATTTACGCAGTGCTAAATCTGCGTCGCAA 8009 |||||| ||| | ||||| ||||| || || | | || | || | || || || Sbjct 139956 TGCCATATATCTTGAGCCTTGGCATGCCGATGTCTTCGAGTTTCTGGACCTCCGGAAGAA 140015 Query 8010 CATGGGTTGCGAAGACAGCAAAGCGCGCGATCTATTCTTCGGATTGTGGGTGCCCGATCT 8069 | ||| ||||| || ||||| || ||| | | |||||| | || ||||| Sbjct 140016 CCACGGTAAGGAAGAGGTGCGTGCTCGCGACCTCTTCCTTGCTTTGTGGATCCCGGATCT 140075 Query 8070 GTTTATGAGGCGCGTTCATTTCGACGCACAATGGTCGCTCATGTGCCCCGATCGTTGCCC 8129 || |||| ||||||| | ||| | ||| |||||||||||||| || ||||| Sbjct 140076 TTTCATGAAGCGCGTTGAGAAGAACGGGGAGTGGACGCTCATGTGCCCCAATGAGTGCCC 140135 Query 8130 TTTATTAAAAAACGTTTACGGTTCAAAATTTGAACAATTGTACAAACAATACGAACACGA 8189 | || ||||| | | ||||| | ||| | | ||||| | || Sbjct 140136 CGGTCTCGCCGACTGCTACGGCGAAGAGTTTGAGGCTCTATACGAGAAGTACGAGAAGGA 140195 Query 8190 CG-GCGCGTACGTGCGGCAAGTGAAAGCGCGCGACCTGCACCGCGCCATTATCGAATGTC 8248 | |||| ||| | | || || || | | || ||||| |||| || Sbjct 140196 GGACCGCGGACGCAAGAC-GGTCAAGGCCCAGAAGCTATGGTATGCCATCCTCGAGGCTC 140254 Query 8249 AAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTGCAACGCCAAAAGCAATC 8308 | | ||| || || | || | |||||| ||||| || ||||||| || ||||| | Sbjct 140255 AGACCGAGACTGGCAACCCCTTCATGCTCTACAAGGATCATTGCAACCGGAAGAGCAACC 140314 Query 8309 AAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGAAATTGTACAGTACAGCG 8368 | | ||| ||||||| ||| | || ||| || ||| ||||||| | ||||| | Sbjct 140315 AGAAGAACCTGGGCACAATTCGCAGCTCCAACCTCTGCACTGAAATCATCGAGTACTCTG 140374 Query 8369 CGCCCGACGAAGTGGCCGTTTGCAA 8393 | ||||| || || ||||| ||||| Sbjct 140375 CTCCCGATGAGGTTGCCGTCTGCAA 140399 >seq20 Length=161045 Score = 98.7 bits (108), Expect = 1e-15 Identities = 135/189 (71%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583 ||||||||||||||||||| | ||| | ||| |||||||| ||||| ||||| | Sbjct 65467 CCTTTTGAATGTTGTAGTCAGAGAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCAAAGA 65526 Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643 ||| |||||||| || || || ||||| || || || || || || ||||| || Sbjct 65527 TCAGGCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGT 65586 Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703 | | || || || || || || ||||| || || || ||||| || | || || |||| Sbjct 65587 CGATGGTATCCGAGGACTCGACCTCGAGGGTGATAGTCTTACCCGTGAGGGTCTTCACGA 65646 Query 134704 AAATTTGCA 134712 | || |||| Sbjct 65647 AGATCTGCA 65655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505393320746080