Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09]
804 sequences; 36,704,944 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq32 116 4e-21
seq12 111 2e-19
seq20 98.7 1e-15
>seq32
Length=147543
Score = 116 bits (128), Expect = 4e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| |||| ||| | ||| || ||| ||||| || || ||||||||
Sbjct 71460 CCACCACGGAGACGCAGCACCAAGTGCAGTGTGCTCTCCTTCTGGATATTGTAGTCAGAC 71401
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| || || || || | ||| ||||| || || || | |||||||||||| |||||
Sbjct 71400 AGAGTCCGACCATCCTCCAACTGCTTGCCCGCGAAGATGAGACGCTGCTGATCAGGCGGG 71341
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || || ||||| || ||||| ||| | |||||| || ||||||||
Sbjct 71340 ATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATTGTGTCCGAAGATTCCACC 71281
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| ||||| || || || || | || || |||||||| |||||
Sbjct 71280 TCGAGCGTAATCGTCTTTCCTGTGAGCGTCTTGACGAAAATCTGCAT 71234
Score = 111 bits (122), Expect = 2e-19
Identities = 147/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569
||| || ||| ||||| || |||||||||||| | ||| || ||| || | |||
Sbjct 71209 GTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGTCCGACCGTCCTCCAACTG 71150
Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629
||||| || || || | |||||| ||||| ||||| ||||| || || || || || ||
Sbjct 71149 CTTGCCCGCGAAGATGAGACGCTGTTGATCAGGCGGGATGCCCTCCTTGTCCTGGATCTT 71090
Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689
| |||||| ||| | ||||| || || ||||| || | || || || || || ||
Sbjct 71089 TGATTTGACGTTGTCAATGGTGTCCGAGGACTCCACCTCCAACGTGATCGTCTTGCCAGT 71030
Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713
| ||| || ||||||||||||||
Sbjct 71029 CAGAGTCTTGACGAAAATTTGCAT 71006
Score = 109 bits (120), Expect = 6e-19
Identities = 146/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | ||||| || ||||| || ||||| || || ||||| ||
Sbjct 71004 CCACCACGGAGACGAAGGACGAGATGGAGCGTCGACTCCTTCTGGATATTGTAATCCGAG 70945
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| || || |||||||| ||||| || ||||||| |||||||| || |||||
Sbjct 70944 AGGGTACGACCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCAGGCGGA 70885
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| || || || || ||||| || ||||| || | || ||||||||||||||
Sbjct 70884 ATACCCTCCTTATCCTGAATCTTCGACTTGACATTATCGATGGTATCGGACGATTCCACC 70825
Query 134667 TCGAGAGTAATGGTTTTACCGGT 134689
||||| || ||||| || |||||
Sbjct 70824 TCGAGGGTGATGGTCTTTCCGGT 70802
>seq12
Length=176190
Score = 111 bits (122), Expect = 2e-19
Identities = 475/745 (64%), Gaps = 7/745 (1%)
Strand=Plus/Plus
Query 7654 TTTACGCACGCTTCGCCCACCATGTTTGCCGCGGGCACAAACGCGCCTCAATTGTCCTCG 7713
|| || ||||||||||| ||| | || ||| || ||| | | | || | || ||
Sbjct 139657 TTCACACACGCTTCGCCGACCCTCTTCAACGCCGGTACACCCCAGGCCCAGCTCTCGTCC 139716
Query 7714 TGTTTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACAACACGCTGCGCGA- 7772
|| || || | |||| || ||||||||||| ||||| ||| ||||||| | ||
Sbjct 139717 TGCTTCCTGGTCGACATGAAGGATGACAGCATCGAGGGCATCTACGACACGCT-CAAGAC 139775
Query 7773 TTGCGCCAATATTTCCAAATACGGCGGCGGAATAGGTCTGAACGTAAACGACGTGCGCGC 7832
|||||||| || ||||| | |||||| || || |||||| | || | | || ||
Sbjct 139776 TTGCGCCATGATCTCCAAGATGGCCGGCGGCATTGGCCTGAACATCCACCGCATCCGTGC 139835
Query 7833 CAACGGTAGCCGCATCGTGTCCACCAACGGAAAAGCCAGCGGTTTAGAGCCCATGTTGCG 7892
|| ||| | ||||| ||| ||||| | ||| ||| | |||||| ||||
Sbjct 139836 CACCGGCTCCTACATCGCCGGCACAAACGGTACCTCCAACGGCATCATTCCCATGCTGCG 139895
Query 7893 CGTGTTCAATAACGCGGTGCGACATGTAGACCAGGGGGG---AAAGCGCAAAGGCGCCGC 7949
||| ||||| || ||| | | || |||||||| || ||||| ||||||
Sbjct 139896 CGTCTTCAACAATACGGCCAGGTACGTCGACCAGGGCGGCAACAAGCGTCCCGGCGCCTT 139955
Query 7950 TGCCATCTATTTGGAGCCGTGGCACGCGGACATTTACGCAGTGCTAAATCTGCGTCGCAA 8009
|||||| ||| | ||||| ||||| || || | | || | || | || || ||
Sbjct 139956 TGCCATATATCTTGAGCCTTGGCATGCCGATGTCTTCGAGTTTCTGGACCTCCGGAAGAA 140015
Query 8010 CATGGGTTGCGAAGACAGCAAAGCGCGCGATCTATTCTTCGGATTGTGGGTGCCCGATCT 8069
| ||| ||||| || ||||| || ||| | | |||||| | || |||||
Sbjct 140016 CCACGGTAAGGAAGAGGTGCGTGCTCGCGACCTCTTCCTTGCTTTGTGGATCCCGGATCT 140075
Query 8070 GTTTATGAGGCGCGTTCATTTCGACGCACAATGGTCGCTCATGTGCCCCGATCGTTGCCC 8129
|| |||| ||||||| | ||| | ||| |||||||||||||| || |||||
Sbjct 140076 TTTCATGAAGCGCGTTGAGAAGAACGGGGAGTGGACGCTCATGTGCCCCAATGAGTGCCC 140135
Query 8130 TTTATTAAAAAACGTTTACGGTTCAAAATTTGAACAATTGTACAAACAATACGAACACGA 8189
| || ||||| | | ||||| | ||| | | ||||| | ||
Sbjct 140136 CGGTCTCGCCGACTGCTACGGCGAAGAGTTTGAGGCTCTATACGAGAAGTACGAGAAGGA 140195
Query 8190 CG-GCGCGTACGTGCGGCAAGTGAAAGCGCGCGACCTGCACCGCGCCATTATCGAATGTC 8248
| |||| ||| | | || || || | | || ||||| |||| ||
Sbjct 140196 GGACCGCGGACGCAAGAC-GGTCAAGGCCCAGAAGCTATGGTATGCCATCCTCGAGGCTC 140254
Query 8249 AAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTGCAACGCCAAAAGCAATC 8308
| | ||| || || | || | |||||| ||||| || ||||||| || ||||| |
Sbjct 140255 AGACCGAGACTGGCAACCCCTTCATGCTCTACAAGGATCATTGCAACCGGAAGAGCAACC 140314
Query 8309 AAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGAAATTGTACAGTACAGCG 8368
| | ||| ||||||| ||| | || ||| || ||| ||||||| | ||||| |
Sbjct 140315 AGAAGAACCTGGGCACAATTCGCAGCTCCAACCTCTGCACTGAAATCATCGAGTACTCTG 140374
Query 8369 CGCCCGACGAAGTGGCCGTTTGCAA 8393
| ||||| || || ||||| |||||
Sbjct 140375 CTCCCGATGAGGTTGCCGTCTGCAA 140399
>seq20
Length=161045
Score = 98.7 bits (108), Expect = 1e-15
Identities = 135/189 (71%), Gaps = 0/189 (0%)
Strand=Plus/Plus
Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583
||||||||||||||||||| | ||| | ||| |||||||| ||||| ||||| |
Sbjct 65467 CCTTTTGAATGTTGTAGTCAGAGAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCAAAGA 65526
Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643
||| |||||||| || || || ||||| || || || || || || ||||| ||
Sbjct 65527 TCAGGCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGT 65586
Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703
| | || || || || || || ||||| || || || ||||| || | || || ||||
Sbjct 65587 CGATGGTATCCGAGGACTCGACCTCGAGGGTGATAGTCTTACCCGTGAGGGTCTTCACGA 65646
Query 134704 AAATTTGCA 134712
| || ||||
Sbjct 65647 AGATCTGCA 65655
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505393320746080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |