Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09] 804 sequences; 36,704,944 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq12 277 2e-69 >seq12 Length=176190 Score = 277 bits (306), Expect = 2e-69 Identities = 1195/1858 (64%), Gaps = 75/1858 (4%) Strand=Plus/Minus Query 110331 TGAACTGAATTGGTCGGGCTTTCGCCTTTGATCGGAGATAGTACATCCCGGTCTTGAGTC 110390 ||||||| || ||| ||||| |||| | ||||| |||||||| || |||||||| | Sbjct 141319 TGAACTGGATAGGTTGGGCTGCAGCCTGGGTGCGGAGGTAGTACATGCCCGTCTTGAGAC 141260 Query 110391 CTTGTTTCCATGCGTACATATGCATAGAAGAGAGCTTGGACATCGTTGGACTTTC---CA 110447 | ||||| || | ||||| | || |||| ||| || || ||| || Sbjct 141259 CCAACTTCCAGCCGGTGAAGTGCATGCTGGTGATCTTGCCCATGGTCGG---TTCACGCA 141203 Query 110448 TGAAGAGGTTCAT--ACTTTGACTTTGGTCAATGAAGCGCCCCCGTTGTGCCGCCATATC 110505 || || ||| | ||| |||| |||| |||||| || || | |||||||| | Sbjct 141202 TGTGGATGTTGAGCGACTGGGACT--GGTCGATGAAGGCTCCACGGTCGGCCGCCATCTG 141145 Query 110506 AATGAC---ATCCT-TCATCTTAATTTCCCAAACTGTGCGATAGAGATTCTTGATATCAT 110561 | ||| | || | | ||||||||| ||||| ||||| ||||||||| Sbjct 141144 GACGACGGTACGCTGTGA----AATTTCCCAGACTGTCTTGTAGAGTGCCTTGATATCGG 141089 Query 110562 CTGGGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTCACC----ATGAGATCCTTC 110617 ||||||| | | || ||||| || ||||| |||||| | ||| ||| |||| Sbjct 141088 CTGGGATGTTGGGAATGTTCTGAATCGAACC----GCCTTCGGCGATGATGCGATTCTTC 141033 Query 110618 ATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGCTTGTTGACAATG 110677 || | | ||||| ||||| || | |||||| || | || |||||| | Sbjct 141032 ATGTTGTCCGACCACAGACCCATATCGACGAGGTCCTTCAGAAGCCAGGGGTTGACGACT 140973 Query 110678 ACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCAT 110737 ||||| || || || | || | |||| || || | ||||| || || |||||| Sbjct 140972 TGGAACTCGCCGGCAAGCACACGTCGCTGGTAAATATTGGACGTGTAAGGCTCGAAGCAT 140913 Query 110738 TCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTG 110797 || || || |||||||| || | ||||||||| || ||||| || || | || |||||| Sbjct 140912 TCGTTGTTGCCCAAGATCTGCGAGGTGGAGGCAGTCGGCATGGGAGCGAGCAGCAGACTG 140853 Query 110798 TTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGA-GCTT 110856 || || | || | ||||||||| |||||||| | ||||| || | | | | Sbjct 140852 TTCCGGACGCCATGCTCCTTGATCTTGGCCTTGAGAGCGTCCCAATCCCACAGGCTGGTC 140793 Query 110857 GGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAA 110916 || || || |||| ||||||| |||| || | || ||||| | ||||| || || | Sbjct 140792 GGCTTGACGTTCC-ACATGTCGTACTGGAGGATACCCTGGGAGACAGGAGATCCTTCGTA 140734 Query 110917 GGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATA 110976 || || | ||||| | | || | || || ||| || | || || || Sbjct 140733 TGTCGGGTACGGGCCTTGCTCCTTGGCGAGGTCGCACGAAGCCGTCAACGCCGCATGGTA 140674 Query 110977 CATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATC-AAATGCGTAGC 111035 |||||||| ||||| | |||| ||| ||| || || || ||| || | | Sbjct 140673 GATGGTTTCGAAGATCTGCTTGTTCAGCTCACGGGCCTCGGGAGACTCGAAAGGCATC-C 140615 Query 111036 GGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCA 111095 || | | || ||||||||||||| ||||| || | || || || | ||| ||| Sbjct 140614 GGAGCGCCAAGAAGGCATCCGCGAGACCCTGAACGCCGACGCCGATGGGGCGGTGGCGCG 140555 Query 111096 TATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGAT 111155 | || || || || || || || || ||| |||| ||| |||| Sbjct 140554 TGTTGCTATTGAAAGCCTCCTTGACCGGGTAGTGGTTGACGTCGATGATCTTGTTCAGAT 140495 Query 111156 TTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTT 111215 | | || | || |||| ||||| || || | |||| | || | ||| Sbjct 140494 TGCGGACGACCACCTGAGTGACCTCATGCAGCTTCTGGAAATCGTA-----GACAC-CTT 140441 Query 111216 CATTGACAT------ACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCAT 111269 | ||| || ||| ||||| || | || ||||| ||||| || || ||||| Sbjct 140440 CGTTGTAATCCACGAACTGAGGAAGTGCCAAGGAGGCCAAGTTGCAGACGGCAACCTCAT 140381 Query 111270 CCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAAT 111329 | | | | |||||| | ||||| || || | |||||| || ||| || |||| | Sbjct 140380 CGGGAGCAGAGTACTCGATGATTTCAGTGCAGAGGTTGGAGCTGCGAATTGTGCCCAGGT 140321 Query 111330 TCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCT 111389 |||| ||||| |||||| |||||| |||||||||||||||| |||| | || |||| Sbjct 140320 TCTTCTGGTTGCTCTTCCGGTTGCAATGATCCTTGTAGAGCATGAAGGGGTTGCCAGTCT 140261 Query 111390 CCGTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGCGGCTGGTAC-AATGGCGTTGGC 111447 | ||||| | | ||| || || | ||| | | || | | || | | | |||| | Sbjct 140260 CGGTCTGAGCCTCGAGGATGGCATACCATAGCTTCTGGGCCTTGACCGTCTTGCGT--CC 140203 Query 111448 CCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGA 111507 || ||||| ||||||||| ||| || || |||||||| || || ||||| Sbjct 140202 GCGGTCCTCCTTCTCGTACTTCTCGTATAGAGCCTCAAACTCTTCGCCGTAGCAGTCGGC 140143 Query 111508 GAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTC--CTCAACCCGC 111565 |||||| || || | || || | || | ||| | || | ||| |||||| ||| Sbjct 140142 GAGACCGGGGCACTCATTGGGGCACATGAGCGTCCACT--CCCCGTTCTTCTCAACGCGC 140085 Query 111566 TTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCG 111625 ||||||||||| || || ||||||| | ||||| || | | || ||||||| Sbjct 140084 TTCATGAAAAGATCCGGGATCCACAAAGCAAGGAAGAGGTCGCGAGCACGCACCTCTTCC 140025 Query 111626 TCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGA 111685 | ||| ||||| || | || || ||||| | || ||| || ||||| ||||||||| Sbjct 140024 TTACCGTGGTTCTTCCGGAGGTCCAGAAACTCGAAGACATCGGCATGCCAAGGCTCAAGA 139965 Query 111686 TAGACTGCGATAGATCC------CTT-TCGACGCCCAGCTTGATTTACATAGCGCGCTGT 111738 || | || | | || ||| | | ||||| || | || || | || || Sbjct 139964 TATATGGCAAAGGCGCCGGGACGCTTGTTGCCGCCC----TGGTCGACGTACCTGGCCGT 139909 Query 111739 GGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGT-CCCCCGA- 111796 ||| || ||||| ||||| ||||| || || | || ||| ||||| || ||| Sbjct 139908 ATTGTTGAAGACGCGCAGCATGGGAATGATGCCGTTGGAGGTACCGTTTGTGCCGGCGAT 139849 Query 111797 ATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTT 111856 || ||| |||| | | ||||||| || ||||| || || ||| ||| Sbjct 139848 GTAGGAG--CCGGTGGCACGGATGCGGTGGATGTTCAGGCCAATGCCGCCGGCCATCTTG 139791 Query 111857 GAGAT--TTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGT 111914 ||||| | ||||| | | | | || || | ||||| || | ||| ||| ||||| Sbjct 139790 GAGATCATGGCGCA-AGT-CTTGAGCGTGTCGTAGATGCCCTCGATGCTGTCATCCTTCA 139733 Query 111915 TGGCGATAAGGAAGCAACTGGACATCTGCGGTCT-TGGTGTACCAGCATTGAAGAGGGTT 111973 || ||| |||||||| || | ||| || || |||||||| || ||||||||||| Sbjct 139732 TGTCGACCAGGAAGCAGGACGAGAGCTG-GGCCTGGGGTGTACCGGCGTTGAAGAGGGTC 139674 Query 111974 GGTGTTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTCTCCAAGACAGAAT 112031 || | ||||| ||| | | |||| ||||| || ||||||||| | ||| | Sbjct 139673 GGCGAAGCGTGTGTGA--AGAACTTGCTCGACATGAGGTTGTATGTCTCAATGACTCGCT 139616 Query 112032 CAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGGGGTTTCCA 112091 | | || || || |||||||| || || ||||||| ||||| |||||| || | Sbjct 139615 CGACGTTGTCTCCCCAGATGCCGACGGCAACGCGCATGATCATGTGCTGTGGACGCTCGA 139556 Query 112092 TGAGGATGCCATCGAGCCGTTGAAGATAGCTCTTCTCAAGGGTTTTGAGACCAAAGTA 112149 || ||||||||||| | ||||| | |||||| || |||| |||||||| Sbjct 139555 CGATCTTGCCATCGAGCTTCAGGAGATACGACCGCTCAAGCGTCTTGAAGCCAAAGTA 139498 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628025688278400