Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09] 804 sequences; 36,704,944 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq12 315 9e-81 >seq12 Length=176190 Score = 315 bits (348), Expect = 9e-81 Identities = 1168/1810 (65%), Gaps = 43/1810 (2%) Strand=Plus/Minus Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896 |||||||||||||| ||||||||||| ||| ||||||| | | ||||| || Sbjct 141287 CGGAGGTAGTACATGCCCGTCTTGAGACCCAACTTCCAGCCGGTGAAGTGCATGCTGGTG 141228 Query 117897 AACTTGGAGAGGGTTGGACTTTC---CATGAAGAGGTTCATACTTTGGGATTGATCGATG 117953 | |||| | ||| || ||| |||| || ||| | ||||| || |||||| Sbjct 141227 ATCTTGCCCATGGTCGG---TTCACGCATGTGGATGTTGAGCGACTGGGACTGGTCGATG 141171 Query 117954 AAGCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGA--TTTCCCACACAG 118011 ||| ||| || || |||||||| | | || | | ||| ||||||| || | Sbjct 141170 AAGGCTCCACGGTCGGCCGCCATCTGGACGACGG--TACGCTGTGAAATTTCCCAGACTG 141113 Query 118012 TCCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCG 118071 || ||||||| ||| ||||| ||||||| | || || || || || || || Sbjct 141112 TCTTGTAGAGTGCCTTGATATCGGCTGGGATGTTGGGAATGTTCTGAATCGAACCGCCTT 141053 Query 118072 CCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCA 118131 | || ||| ||| |||||| | | ||||| ||||| || | ||| |||| || Sbjct 141052 CGGCGATGATGCGATTCTTCATGTTGTCCGACCACAGACCCATATCGACGAGGTCCTTCA 140993 Query 118132 CGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGG 118191 || ||||| || ||||| || || || |||| | | || ||||||| Sbjct 140992 GAAGCCAGGGGTTGACGACTTGGAACTCGCCGGCAAGCACACGTCGCTGGTAAATATTGG 140933 Query 118192 TCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCA 118251 |||||| ||||| ||||| || ||||| |||||||| || | |||||||| || |||| Sbjct 140932 ACGTGTAAGGCTCGAAGCATTCGTTGTTGCCCAAGATCTGCGAGGTGGAGGCAGTCGGCA 140873 Query 118252 TGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGT 118311 |||| || | || || ||||| |||| || | ||| | || |||||||||||| Sbjct 140872 TGGGAGCGAGCAGCAGACTGTTCCGGACGCCATGCTCCTTGATCTTGGCCTTGAGAGCGT 140813 Query 118312 CCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGG 118371 |||| || | | | | || | | |||||| || ||||||||||||| |||| Sbjct 140812 CCCAATCCCACAGGCTGGTCGGCTTGACGTTCCACATGTCGTACTGGAGGATACCCTGGG 140753 Query 118372 ACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCG 118431 | | || ||||| || ||||| || ||||| | ||| || | ||| | | Sbjct 140752 AGACAGGAGATCCTTCGTATGTCGGGTACGGGCCTTGCTCCTTGGCGAGGTCGCACGAAG 140693 Query 118432 CCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGT 118491 || | || || || || || ||||| || || | |||| | ||||||| Sbjct 140692 CCGTCAACGCCGCATGGTAGATGGTTTCGAAGATCTGCTTGTTCAGCTCACGGGCCTCGG 140633 Query 118492 CGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGC 118551 || || || | | ||| | | || ||||||||||||| || || |||| || Sbjct 140632 GAGACTCGAAAGGCATCCGGAGCGCCAAGAAGGCATCCGCGAGACCCTGAACGCCGACGC 140573 Query 118552 CAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTAT 118611 | || ||||| || | | | || || ||| || || || || || | Sbjct 140572 CGATGGGGCGGTGGCGCGTGTTGCTATTGAAAGCCTCCTTGACCGGGTAGTGGTTGACGT 140513 Query 118612 CGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAAT 118671 |||| | | | || ||||| | ||| |||| |||| ||||| ||||| | | ||| Sbjct 140512 CGATGATCTTGTTCAGATTGCGGACGACCACCTGAGTGACCTCATGCAGCTTCTGGAAAT 140453 Query 118672 C----AAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTA 118727 | | | || || | | || || ||| |||||| || | || |||| || Sbjct 140452 CGTAGACACCTTCG----TTGTAATCCACGAACTGAGGAAGTGCCAAGGAGGCCAAGTTG 140397 Query 118728 CACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTC 118787 || || | |||||| | ||| |||||| || ||||| ||||| | ||| || || Sbjct 140396 CAGACGGCAACCTCATCGGGAGCAGAGTACTCGATGATTTCAGTGCAGAGGTTGGAGCTG 140337 Query 118788 TTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATG 118847 ||| ||||||| |||||| || || ||| ||| || ||||||||| |||||| Sbjct 140336 CGAATTGTGCCCAGGTTCTTCTGGTTGCTCTTCCGGTTGCAATGATCCTTGTAGAGCATG 140277 Query 118848 TATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGG 118906 | || | || ||||| || || | || ||| || || | ||| | | || | || | Sbjct 140276 AAGGGGTTGCCAGTCTCGGTCTGAGCCTCGAGGATGGCATACCATAGCTTCTGGGCCTTG 140217 Query 118907 CACAG--TGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCT 118964 || | | |||| | || |||| | ||||||||| ||| || || ||||||||| Sbjct 140216 -ACCGTCTTGCGT--CCGCGGTCCTCCTTCTCGTACTTCTCGTATAGAGCCTCAAACTCT 140160 Query 118965 TCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCA 119024 || || | || | ||| || || || || ||||| | ||| | ||| | || Sbjct 140159 TCGCCGTAGCAGTCGGCGAGACCGGGGCACTCATTGGGGCACATGAGCGTCCACTCCCCG 140100 Query 119025 CCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGA 119084 || |||||| ||||||||||| || || |||||||| | || |||||| || ||| Sbjct 140099 TTCTTCTCAACGCGCTTCATGAAAAGATCCGGGATCCACAAAGCAAGGAAGAGGTCGCGA 140040 Query 119085 CAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCG 119144 || | ||||| | || || || || | |||| ||| || | || ||| || Sbjct 140039 GCACGCACCTCTTCCTTACCGTGGTTCTTCCGGAGGTCCAGAAACTCGAAGACATCGGCA 139980 Query 119145 TGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACGACCAGCCTGGTTTACA 119201 ||||| || || || || | || | | || ||| || |||||| || Sbjct 139979 TGCCAAGGCTCAAGATATATGGCAAAGGCGCCGGGACGCTTGTTGCCGCCCTGGTCGACG 139920 Query 119202 TACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTT 119261 ||||| || || ||| || || || ||||| |||||||| || | ||| || ||| Sbjct 139919 TACCTGGCCGTATTGTTGAAGACGCGCAGCATGGGAATGATGCCGTTGGAGGTACCGTTT 139860 Query 119262 GT-CCCCCGA-ATACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCAATACCCC 119319 || || ||| || ||| | |||| | || |||||||| || ||||| || | Sbjct 139859 GTGCCGGCGATGTAGGAGCC--GGTGGCACGGATGCGGTGGATGTTCAGGCCAATGCCGC 139802 Query 119320 CTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGT 119379 | ||| ||| ||||| ||||| | |||| || ||||||| || ||||| || Sbjct 139801 CGGCCATCTTGGAGATCATGGCGCAAGTCTTGAGCGTGTCGTAGATGCCCTCGATGCTGT 139742 Query 119380 CACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCT-GGGTGTACCAGCGTTG 119438 || |||| | ||| ||||||||| ||| | || ||||| ||||||||| |||||| Sbjct 139741 CATCCTTCATGTCGACCAGGAAGCAGGACGAGAGCTG-GGCCTGGGGTGTACCGGCGTTG 139683 Query 119439 AAGAGAGTTGGTGTCGCGTGGATGAACATACCTTG--GGACATCTTGTCGTAGGTCTCCA 119496 ||||| || || | ||||| ||| | | |||| ||||| || ||| ||||| | Sbjct 139682 AAGAGGGTCGGCGAAGCGTGTGTGA--AGAACTTGCTCGACATGAGGTTGTATGTCTCAA 139625 Query 119497 AGAC-GGCGGGA--ATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATT 119553 ||| || || ||||| ||| | || |||| | || ||||| | ||||| | Sbjct 139624 TGACTCGCTCGACGTTGTCTCCCCAG---ATGCCGACGGCAACGCGCATGATCATGTGCT 139568 Query 119554 GGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGA 119613 | || || | | | ||||||||| || |||| || | ||| | ||||||| Sbjct 139567 GTGGACGCTCGACGATCTTGCCATCGAGCTTCAGGAGATACGACCGCTCAAGCGTCTTGA 139508 Query 119614 GACCAAAATA 119623 ||||| || Sbjct 139507 AGCCAAAGTA 139498 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618428984726240