Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09] 804 sequences; 36,704,944 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq12 214 2e-50 seq28 84.2 3e-11 >seq12 Length=176190 Score = 214 bits (236), Expect = 2e-50 Identities = 1127/1759 (64%), Gaps = 73/1759 (4%) Strand=Plus/Plus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACA---TTGATTCT 104278 |||||| ||||| |||||||||| ||| |||| || |||||| |||| | || Sbjct 139564 CCACAGCACATGATCATGCGCGTTGCCGTCGGCATC--TGGGGA-GACAACGTCGAGCGA 139620 Query 104279 GTCTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCC 104336 ||| | ||||||||| || ||||| |||| | | ||| ||||| | || |||| Sbjct 139621 GTCATTGAGACATACAACCTCATGTCGAGCAAGTTCT--TCACACACGCTTCGCCGACCC 139678 Query 104337 TCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGG 104396 ||||||| || |||||||| |||| | || |||||||| ||| || |||| Sbjct 139679 TCTTCAACGCCGGTACACCCCAGGCCCAGCTCTCGTCCTGCTTCCTGGTCGACATGAAGG 139738 Query 104397 AGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAA--ATCTCAAAGTG 104454 | ||| ||| | || ||||| | || || | | | | ||||| | ||||| ||| Sbjct 139739 ATGACAGCATCGAGGGCATCTACGACACGCTCAAG-ACT-TGCGCCATGATCTCCAAGAT 139796 Query 104455 GGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGG 104513 ||| || || ||||| || ||||||| | | |||| ||| || ||| Sbjct 139797 GGCCGGCGGCATTGGCCTGAACATCCACCGCATCCGTGCCACCGG--CTCCTACATCGCC 139854 Query 104514 GG-ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 104572 || ||||| ||| || | || || ||||| ||||| ||||| || ||| || || Sbjct 139855 GGCACAAACGGTACCTCCAACGGCATCATTCCCATGCTGCGCGTCTTCAACAATACGGCC 139914 Query 104573 CGCTATGTAAATCAAGCTGGGCGTCGA-AAG------GGATCTATCGCAGTCTATCTTGA 104625 | || || | || ||||| | | ||| || | | || | |||||||| Sbjct 139915 AGGTACGTCGACCA----GGGCGGCAACAAGCGTCCCGGCGCCTTTGCCATATATCTTGA 139970 Query 104626 GCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGA 104685 ||| ||||| || ||| || | ||||| || || | || ||||| ||| | || || Sbjct 139971 GCCTTGGCATGCCGATGTCTTCGAGTTTCTGGACCTCCGGAAGAACCACGGTAAGGAAGA 140030 Query 104686 GGCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAG 104744 || || |||| ||||| |||||| ||| | ||||| || ||||| ||||||||| | | Sbjct 140031 GGTGC-GTGCTCGCGACCTCTTCCTTGCTTTGTGGATCCCGGATCTTTTCATGAAGCGCG 140089 Query 104745 TTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATG 104804 ||||| ||| || | ||| | ||| | || || | || || |||||| |||| Sbjct 140090 TTGAGAAGAACGGGGAGTGGACGCTCATGTGCCCCAATGAGTGCCCCGGTCTCGCCGACT 140149 Query 104805 CCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTG 104864 | || || |||||||| || || ||| |||||||| |||| ||| | | ||| | Sbjct 140150 GCTACGGCGAAGAGTTTGAGGCTCTATACGAGAAGTACGA-GAAGGAGGACCGCGGAC-G 140207 Query 104865 C--GACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTG 104921 | |||||| | || | || | | ||| | || || ||| || |||| |||||||||| Sbjct 140208 CAAGACGGT-CAAGGCCCAGAAGCTATGGTATGCCATCCTCGAGGCTCAGACCGAGACTG 140266 Query 104922 GTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGG 104981 | | || | |||||| ||||| || || |||| ||||| || || ||||| ||| Sbjct 140267 GCAACCCCTTCATGCTCTACAAGGATCATTGCAACCGGAAGAGCAACCAGAAGAACCTGG 140326 Query 104982 GTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGA 105041 | || || ||||| ||||| || |||||| | || | | | |||||| Sbjct 140327 GCACAATTCGCAGCTCCAACCTCTGCACTGAAATCATCGAGTACTCTGCTCCCGATGAGG 140386 Query 105042 CGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGA 105101 || || || ||| | || || | || || || ||| |||||| | | || ||| Sbjct 140387 TTGCCGTCTGCAACTTGGCCTCCTTGGCACTTCCTCAGTTCGTGGAT-TACA-ACGAAGG 140444 Query 105102 CATTT--GATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAG 105159 | | |||| | || || || || || || | ||| | || || |||| Sbjct 140445 TGTCTACGATTTCCAGAAGCTGCATGAGGTCACTCAGGTGGTCGTCCGCAATCTGAACAA 140504 Query 105160 AGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCG 105219 | || || || ||||| || || ||| || || | | | ||||| Sbjct 140505 GATCATCGACGTCAACCACTACCCGGTCAAGGAGGCTTTCAATAGCAACACGCGCCACCG 140564 Query 105220 TCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTG---TCGCCACGC 105276 || || || |||| ||||||||||||||||||| | ||||| | || | || Sbjct 140565 CCCCATCGGCGTCGGCGTTCAGGGTCTCGCGGATG----CCTTCTTGGCGCTCCGGATGC 140620 Query 105277 ATTT-GATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACG 105335 ||| || || ||| || || | || || || || || ||||| || || | Sbjct 140621 CTTTCGAGTCTCCCGAGGCCCGTGAGCTGAACAAGCAGATCTTCGAAACCATCTACCATG 140680 Query 105336 CCGCTCTTGA-GGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAG 105394 | || |||| ||| | || | || ||| | || || || || | || Sbjct 140681 CGGC-GTTGACGGCTTCGTGCGACCTCGCCAAGGAGCAAGGCCCGTACCCGACATACGAA 140739 Query 105395 GGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGA----GACCAA 105450 || ||||| | || || || | || || | || |||| |||| || | |||| | Sbjct 140740 GGATCTCCTGTCTCCCAGGGTATCCTCCAGTACGACATGT-GGAACGTCAAGCCGACC-A 140797 Query 105451 GCTTCACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAG 105510 || | | || ||||| |||||||||| ||||||||| | || | || ||||| Sbjct 140798 GC--CTGTGGGATTGGGACGCTCTCAAGGCCAAGATCAAGGAGCATGGCGTCCGGAACAG 140855 Query 105511 TCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATG 105570 ||| || | ||||| ||||| || ||||||||| | || |||||||| || || ||||| Sbjct 140856 TCTGCTGCTCGCTCCCATGCCGACTGCCTCCACCTCGCAGATCTTGGGCAACAACGAATG 140915 Query 105571 CTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGAT 105630 ||| || || |||||| | || || || | | || | || || || ||||| | Sbjct 140916 CTTCGAGCCTTACACGTCCAATATTTACCAGCGACGTGTGCTTGCCGGCGAGTTCCAAGT 140975 Query 105631 TGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAA 105690 |||||| || || | |||||| || || ||||| ||||| | | ||||| Sbjct 140976 CGTCAACCCCTGGCTTCTGAAGGACCTCGTCGATATGGGTCTGTGGTCGGACAACATGAA 141035 Query 105691 GGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAAT 105750 | ||| ||| | | || ||||| ||||| || ||| | || ||| || || Sbjct 141036 GAATCGCATCATCGCCGAAGGCGGTTCGATTCAGAACATTCCCAACATCCCAGCCGATAT 141095 Query 105751 TAAGAAGTTGTACCGCACAGTTTGGGAAA--TCAAGATGAAGGATGTCATTGACATGGCC 105808 ||| | ||| ||||| ||||||| ||| | | ||| | | ||||| Sbjct 141096 CAAGGCACTCTACAAGACAGTCTGGGAAATTTCACAGCGTA--CCGTCGTCCAGATGGCG 141153 Query 105809 GCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTCTTCATG---GAAA 105863 || || ||||| |||||| || | |||| ||| | || || |||| ||| Sbjct 141154 GCCGACCGTGGAGCCTTCATCGACC--AGTCCCAGTCGCTCAACATCCACATGCGTGAA- 141210 Query 105864 GTCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAA 105923 || || ||| |||| || | |||||| | | | |||||| ||||||||| | Sbjct 141211 --CCGACCATGGGCAAGATCACCAGCATGCACTTCACCGGCTGGAAGTTGGGTCTCAAGA 141268 Query 105924 CGGGGATGTATTACCTCCG 105942 |||| ||||| |||||||| Sbjct 141269 CGGGCATGTACTACCTCCG 141287 >seq28 Length=150989 Score = 84.2 bits (92), Expect = 3e-11 Identities = 155/225 (69%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 9704 GCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGA 9763 ||||||||||| || ||||||| |||||| || ||| | ||| || |||| || Sbjct 7130 GCATCAATCTCGTCGATGAAGATGATGCAGGGGGCATTCTTGCGCGCCGTGGCAAATAGG 7189 Query 9764 TCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-ACA 9822 || || || || ||||| || || || |||||||| || || | | | || || Sbjct 7190 TCTCGGACGCGGGACGCGCCGACGCCCACGAACATCTCGACGAACTCGGAGCCGCTGACG 7249 Query 9823 TTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGT 9882 || | |||||| || | || || || || | || | |||||| || |||||||| || Sbjct 7250 CTGAA-GAAGGGTACCTGCGACTCGCCGGCCGTCGCCCTGGCGAGCAGGGTCTTACCGGT 7308 Query 9883 ACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 9927 ||| || ||| | |||| || || || || ||||||||||| Sbjct 7309 ACCAGGGGGACCGGACAGGATAGCGCCACGGGGGATCTTGGCGCC 7353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583254938228960