Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09] 804 sequences; 36,704,944 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq12 322 5e-83 seq320 120 3e-22 >seq12 Length=176190 Score = 322 bits (356), Expect = 5e-83 Identities = 532/759 (70%), Gaps = 14/759 (2%) Strand=Plus/Plus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252 |||||||||| ||| | || ||| || ||| || | ||| ||| |||||| ||| Sbjct 139577 TCATGCGCGTTGCCGTCGGCATCTGGGGAGACAACGTCGAGCGAGTCATTGAGACATACA 139636 Query 53253 ACTTAATG---AGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTA 53309 || | ||| ||| |||| ||| || ||||| |||| ||||| |||||||| |||| Sbjct 139637 ACCTCATGTCGAGC---AAGTTCTTCACACACGCTTCGCCGACCCTCTTCAACGCCGGTA 139693 Query 53310 CGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACG 53369 | || | ||| | ||| |||||||||||| | |||||||||||| ||||| | Sbjct 139694 CACCCCAGGCCCAGCTCTCGTCCTGCTTCCTGGTCGACATGAAGGATGACAGCATCGAGG 139753 Query 53370 GCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTA 53429 |||||||||| ||||||||| || ||| ||||||||| | | || || || || Sbjct 139754 GCATCTACGACACGCTCAAGACTTGCGCCATGATCTCCAAGATGGCCGGCGGCATTGGCC 139813 Query 53430 TCCACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGC 53487 | || || | || ||||||| | |||| | ||| || || ||||| | | Sbjct 139814 TGAACA--TCCACCGCATCCGTGCCACCGGCTCCTACATCGCCGGCACAAACGGTACCTC 139871 Query 53488 CGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGG 53547 | | || ||| | || ||||| |||||||||||||| |||||| |||||||| ||||||| Sbjct 139872 CAACGGCATCATTCCCATGCTGCGCGTCTTCAACAATACGGCCAGGTACGTCGACCAGGG 139931 Query 53548 TGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTAT 53607 || ||||| || | || ||||| || || ||||| ||||| ||||| | | Sbjct 139932 CGGCAACAAGCGTCCCGGCGCCTTTGCCATATATCTTGAGCCTTGGCATGCCGATGTCTT 139991 Query 53608 GGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGT 53666 |||||||| || || || ||| || ||| | |||||| |||| ||| || ||||| | Sbjct 139992 CGAGTTTCTGGACCTCCGGAAGAACCACGGTAAGGAAGAGGTGCG-TGCTCGCGACCTCT 140050 Query 53667 TTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGT 53726 | ||| ||||||| ||||| || |||||| | || |||||| ||| ||||||| Sbjct 140051 TCCTTGCTTTGTGGATCCCGGATCTTTTCATGAAGCGCGTTGAGAAGAACGGGGAGTGGA 140110 Query 53727 ACCTGATGTGCCCGAACGAGTGCCCCGGCCTC-CAGGGTGTCTACGGTGAGGAGTTTAAC 53785 || |||||||| || ||||||||||| ||| | | || |||||| || |||||| | Sbjct 140111 CGCTCATGTGCCCCAATGAGTGCCCCGGTCTCGCCGACTG-CTACGGCGAAGAGTTTGAG 140169 Query 53786 GAGATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAG 53845 | | || || ||||| ||| |||| |||| ||||||||| | || Sbjct 140170 GCTCTATACGAGAAGTACGAGAAGGAGGACCGCGGACGCAAGACGGTCAAGGCCCAGAAG 140229 Query 53846 GTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAG 53905 ||||| |||| |||||| || ||| ||||| || | || | |||| ||||||| Sbjct 140230 CTATGGTATGCCATCCTCGAGGCTCAGACCGAGACTGGCAACCCCTTCATGCTCTACAAG 140289 Query 53906 GATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGC 53944 ||| |||| ||||||||||||||||||| | ||| Sbjct 140290 GATCATTGCAACCGGAAGAGCAACCAGAAGAACCTGGGC 140328 Score = 93.3 bits (102), Expect = 5e-14 Identities = 106/140 (76%), Gaps = 2/140 (1%) Strand=Plus/Plus Query 55787 GCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATG-GAGAATCC 55845 || || ||||| || | |||||||||||||||||| || |||||| |||| | ||| || Sbjct 141154 GCCGACCGTGGAGCCTTCATCGACCAGTCCCAGTCGCTCAACATCCACATGCGTGAA-CC 141212 Query 55846 TTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGG 55905 | ||| |||| | | | |||||||| ||| |||||| ||| ||||||||||| Sbjct 141213 GACCATGGGCAAGATCACCAGCATGCACTTCACCGGCTGGAAGTTGGGTCTCAAGACGGG 141272 Query 55906 TATGTACTATCTGCGGACCC 55925 |||||||| || || |||| Sbjct 141273 CATGTACTACCTCCGCACCC 141292 >seq320 Length=41428 Score = 120 bits (132), Expect = 3e-22 Identities = 237/343 (69%), Gaps = 6/343 (2%) Strand=Plus/Minus Query 152769 GTTGAGGACCAAGCCCTTGATGTGCGATCCGTCAAGATCCGCGTCGGTCATGATCATCAG 152828 ||||| || || |||||||||||| ||||| ||||| |||| ||||||||||| Sbjct 24535 GTTGATGAGCAGGCCCTTGATGTGGCTACCGTCGAGATCTTGATCGGCCATGATCATCAA 24476 Query 152829 ACGACCGTAGCGCAGGTCACGTAGTGACCC-GTAGACCTTTCCATG-TTGAAGCCCGAGG 152886 | | |||||||| ||| | | | ||| | |||| || || || ||||| |||| Sbjct 24475 ATGGCCGTAGCGGAGGCC-CTTGGTGTCGGTGTAGTGCTGCTTGTGCTTCAAGCC-GAGG 24418 Query 152887 ATCTTTTTGAGGTTGGAAAATTCCTCATTATCGGTCACCTGTTTCACCGTGGCATCCCGA 152946 | |||||||| ||| || |||| || | | | ||| | | || ||| || || Sbjct 24417 AACTTTTTGATGTTCTCAATCTCCTTGTTCTTCATGATCTGGTCGAGCGAGGCGTCGCGC 24358 Query 152947 ACATTGCGCGGCTTTCCCCGGAGTGGAAACACGCCGAACGCGTTGCGGC-CTACAACGCT 153005 || ||| || ||| || ||||| || || ||||||| ||| | ||| | | |||| Sbjct 24357 ACGTTGAGCATCTTACCGCGGAGCGGGAAGACGCCGAT-GCGGTCCGGATCCAGAACGGC 24299 Query 153006 CAGACCGGCAATAGCAAGGGCTTTCGCCGAGTCACCCTCGGTGATAATAAGCGTACAGTC 153065 | ||||| | || || | | ||||||||||| ||||| | ||| || || || || Sbjct 24298 ACGGCCGGCGACGGCCAGACCCCTGGCCGAGTCACCTTCGGTCAGAATGAGGGTGCACTC 24239 Query 153066 GTGAGACCGATGAGTACCGGCCCAGTTGGCGTCGTCAAGCTTG 153108 ||| || | || |||||||||||||| ||| |||||||| Sbjct 24238 GTGGCCGCGCTTCGTGCCGGCCCAGTTGGCATCGACAAGCTTG 24196 Score = 114 bits (126), Expect = 1e-20 Identities = 304/455 (67%), Gaps = 12/455 (3%) Strand=Plus/Minus Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211 || || |||||||| || ||||| || | ||||| ||| || | ||| || |||||| | Sbjct 25434 CCCGTGCCGATACCGTCGGCACCGTTGACCAGAACCATGGGGATGACCGGGGCGTAGACC 25375 Query 117212 TCAGGCTCCACC-TGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCA--CTC 117268 | ||||| | | ||| | |||||||| ||||| ||| | | ||| || Sbjct 25374 TTGGGCTCGATCATGCGG-CCGTCGTCGAACTGGTACTCGAGATTGGGCTCGTCGAGCTT 25316 Query 117269 GGATCGAATATGTTCTTGGTCCACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCA 117328 || ||| | || | || | || | ||||| ||| |||||||||| ||| || Sbjct 25315 CGA--GAACACGTGCCGGGCAAAGGGCGACAGGCGCGTGTGGATGTAACGAGCGCTCGCG 25258 Query 117329 GCATCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGG 117388 || ||| |||||||| ||||||| ||| || | || || ||||||| | ||| | | Sbjct 25257 GCGTCCGAGCCACCAGACAGACGCGAACCAAAGTTGCCGCTAGGCTCCAGGCAGTTGACG 25198 Query 117389 TTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGCCTCA 117448 || || | || || |||| || || | | | || || || || |||||| Sbjct 25197 TTATTAGATCCAACGTAGTTCTGCGCTAGGCCAATGATTGTCTGCTGCAGCGACGCCTCC 25138 Query 117449 CCATGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCATGTC- 117507 || ||||| || || | | ||| | ||||| || || | || || ||||| ||| Sbjct 25137 CCGTGGTGGTATGCGGCCACCTCGGAGACGTAACCGGCAAACTCGGCAACCTTTTGGTCG 25078 Query 117508 -TGACGTCAGGTTCTTCTTGA-GGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCAGA 117565 ||||| |||||| ||||| |||| |||| || ||||||||||||| |||||||| Sbjct 25077 CTGACG--AGGTTCCGCTTGAAGGCAC-CATAGATGACCTTGCGCTGACCGGGCTTCAGG 25021 Query 117566 CCATCCGCCACGTGAGGGATCGAACGCTTGATGTC 117600 || || ||| | || || || ||| || |||| Sbjct 25020 CCGTCAACCATGGACGGAATAGACCGCATGTTGTC 24986 Score = 98.7 bits (108), Expect = 1e-15 Identities = 219/329 (67%), Gaps = 0/329 (0%) Strand=Plus/Minus Query 118013 AGCCCCTTGATATGGGAACCGTCCAGATCCGCATCGGTCATGATCATCAGGCGGCCGTAC 118072 || |||||||| ||| |||||| ||||| ||||| ||||||||||| ||||||| Sbjct 24525 AGGCCCTTGATGTGGCTACCGTCGAGATCTTGATCGGCCATGATCATCAAATGGCCGTAG 24466 Query 118073 CGTAAATCTCTCAGGGAGTTATAAACCTTACCATGTTGGAGCCCGAGGATCTTTTTAAGG 118132 || | | | | | | || || || | | ||||||| |||||| | | Sbjct 24465 CGGAGGCCCTTGGTGTCGGTGTAGTGCTGCTTGTGCTTCAAGCCGAGGAACTTTTTGATG 24406 Query 118133 TTGGAAAATTCCTCATTTTCCGTCACCTGTTTTATGGTGGCGTCCCGAACGTTGCGCGGC 118192 || || |||| || | | | | ||| | | | |||||| || |||||| || | Sbjct 24405 TTCTCAATCTCCTTGTTCTTCATGATCTGGTCGAGCGAGGCGTCGCGCACGTTGAGCATC 24346 Query 118193 TTACCCCGCAGTGGAAACACGCCAAACTTGTCACGGCCCACAACGCTCAAGCCGGCAATA 118252 ||||| || || || || ||||| | ||| | ||| |||| |||||| | Sbjct 24345 TTACCGCGGAGCGGGAAGACGCCGATGCGGTCCGGATCCAGAACGGCACGGCCGGCGACG 24286 Query 118253 GCAAGGGCCTTCGCCGAGTCACCCTCGGTAATAATAAGAGTGCACTCGGTGCTGCGATGA 118312 || || || | ||||||||||| ||||| | ||| || ||||||||| || ||| | Sbjct 24285 GCCAGACCCCTGGCCGAGTCACCTTCGGTCAGAATGAGGGTGCACTCGTGGCCGCGCTTC 24226 Query 118313 GTACCGGCCCAATTAGCATCATCCAGCTT 118341 || |||||||| || ||||| | ||||| Sbjct 24225 GTGCCGGCCCAGTTGGCATCGACAAGCTT 24197 Score = 95.1 bits (104), Expect = 1e-14 Identities = 143/201 (71%), Gaps = 12/201 (6%) Strand=Plus/Minus Query 118996 CTCAACCTTGCTCATGTTGTCGGTCCAAGATTGCATGTAGATCTTCT-----TACCATCA 119050 ||| | ||||||||||||||||||||| | ||| ||||| ||| | | | Sbjct 23461 CTCCATCTTGCTCATGTTGTCGGTCCAGGTCTGCTTGTAGCGCTTTCCGTTGTTCGAGTC 23402 Query 119051 CTA-ATTTTGATGTTAAATTTCGAACTGAACACGTTGGCTAGCTTGGCACCGTATCCGTT 119109 || | | |||| | || || ||||| | |||||| ||||| || ||||| ||||| Sbjct 23401 CTGGAGCTCGATGGTGAACCTCCGGCTGAAGATGTTGGCGAGCTTCGCGCCGTAACCGTT 23342 Query 119110 CCGACCACCGGTCACGCGCTGCTCCTCG---TCGTTGTAGTTGGAGCTGGTCAAAAGGTG 119166 || |||||| ||| | || |||| |||| ||||||||||| || | ||| || Sbjct 23341 GCGGCCACCG---ACGGTCCTCTTCTCGGCATCGTCGTAGTTGGAGCCCGTGAGAAGATG 23285 Query 119167 CCCAAAGATGAGCTCGGGGAT 119187 |||||||||||||||||||| Sbjct 23284 ACCAAAGATGAGCTCGGGGAT 23264 Score = 95.1 bits (104), Expect = 1e-14 Identities = 297/453 (66%), Gaps = 8/453 (2%) Strand=Plus/Minus Query 151876 CCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAAAC 151935 || || ||||| || || |||||||||||||||| ||| || | | |||||||| | | Sbjct 25434 CCCGTGCCGATACCGTCGGCACCGTTGACCAGAACCATGGGGATGACCGGGGCGTAGACC 25375 Query 151936 TCCGGCTCCACCTGTTGACCGTCATCCATCACGTATTTCAAAACGGAATTGTC-AGCCGG 151994 | ||||| | | | ||||| || | | ||| | | | || | ||| ||| Sbjct 25374 TTGGGCTCGATCATGCGGCCGTCGTCGAACTGGTACTCGAGATTGGGCTCGTCGAGCT-- 25317 Query 151995 ATCGAATATCCGT-CGAGTCATAGGACT-CAAACGCGTGAAGATGTATCGGGAGCTGGCC 152052 |||| | ||| | | || ||| | || |||||| |||||| || | ||| || Sbjct 25316 -TCGAGAACACGTGCCGGGCAAAGGGCGACAGGCGCGTGTGGATGTAACGAGCGCTCGCG 25258 Query 152053 GCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGAGG 152112 || ||| |||||| | ||| |||| ||||| | || ||||| ||| ||||| | Sbjct 25257 GCGTCCGAGCCACCAGACAGACGCGAACCAAAGTTGCCGCTAGGCTCCAGGCAGTTGACG 25198 Query 152113 TTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTTCA 152172 || || | || ||| | ||||| || | | || || |||||| ||| || Sbjct 25197 TTATTAGATCCAACGTAGTTCTGCGCTAGGCCAATGATTGTCTGCTGCAGCGACGCCTCC 25138 Query 152173 CCGTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGTCC 152232 |||||||| || || | | ||| | || ||| || || |||| || ||||| ||| Sbjct 25137 CCGTGGTGGTATGCGGCCACCTCGGAGACGTAACCGGCAAACTCGGCAACCTTTTGGTCG 25078 Query 152233 GTCGTCAGGTTCTTCTTGA-GACAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAAACC 152291 | |||||| ||||| | || | || || ||||||||||| || |||| || Sbjct 25077 CTGACGAGGTTCCGCTTGAAGGCAC-CATAGATGACCTTGCGCTGACCGGGCTTCAGGCC 25019 Query 152292 GTCCACCACGTGAGGAATCGAACGCTTGATGTC 152324 ||| |||| | ||||| || ||| || |||| Sbjct 25018 GTCAACCATGGACGGAATAGACCGCATGTTGTC 24986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547210500479200