Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09]
804 sequences; 36,704,944 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq12 300 2e-76
seq177 167 3e-36
seq32 154 2e-32
seq20 147 2e-30
seq320 129 7e-25
>seq12
Length=176190
Score = 300 bits (332), Expect = 2e-76
Identities = 1162/1803 (64%), Gaps = 71/1803 (4%)
Strand=Plus/Minus
Query 79987 GCCGCCTGATCAACGGGTACCGTCACCTGAATTGGCTTGGCCTTTGCCCGCGTCCGCAGA 80046
||| ||||||| |||| | | ||| || || | ||| ||| | || || ||
Sbjct 141335 GCCTCCTGATCGACGG------TGAACTGGATAGGTTGGGCTGCAGCCTGGGTGCGGAGG 141282
Query 80047 TAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAACTGAGCTTC 80106
|||||||||||||||||||| ||| |||||||||| | |||||| ||| |||
Sbjct 141281 TAGTACATGCCCGTCTTGAGACCCAACTTCCAGCCGGTGAAGTGCATGCTGGTGATCTTG 141222
Query 80107 GCAAGTGTGGGGTTCTC-CATGAAGATGTTCAGAGACTGAGACTGACAGATGAAAGCCCC 80165
| | || || ||| | |||| |||||| || ||||| ||||| |||||| || ||
Sbjct 141221 CCCATGGTCGG-TTCACGCATGTGGATGTTGAGCGACTGGGACTGGTCGATGAAGGCTCC 141163
Query 80166 ACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCATACTGTACGATACA- 80224
||| || |||||||| | | | | |||| ||||||||| ||||| || |
Sbjct 141162 ACGGTCGGCCGCCATCTGGACGACGGTACGCTGTGAAATTTCCCAGACTGTCTTGTAGAG 141103
Query 80225 --CCTTACGAAGCTCCTCTGGAATGTCCAGATTTTGCACACTGCCACCGTCCTTT----A 80278
|||| | || |||| |||| || | | | | | |||| |||| |
Sbjct 141102 TGCCTTGATA---TCGGCTGGGATGTTGGGAATGTTCTGAATCGAACCG-CCTTCGGCGA 141047
Query 80279 CAATTTGATTTTTCAATTCAGACGTCCAGACACCAAGCTTGTGCAGATCTTTCACAAG-- 80336
|| |||| |||| | || ||| | ||| | | | || || |||| |||
Sbjct 141046 TGATGCGATTCTTCATGTTGTCCGACCACAGACCCATATCGACGAGGTCCTTCAGAAGCC 140987
Query 80337 -GTGCTTGTTAATCATGACAAACTCTCCCGCGAGGGTGCGACGCAGATACAGGTTTGTAG 80395
| | ||| | | || ||||| || || || || ||| | || | || | |
Sbjct 140986 AGGGGTTGACGA-CTTGG--AACTCGCCGGCAAGCACACGTCGCTGGTAAATATTGGACG 140930
Query 80396 TGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCTCGCCGTCGGCATCG 80455
|||||||||| || |||||||| || | |||||| | ||| || |||||||| |
Sbjct 140929 TGTAAGGCTCGAAGCATTCGTTGTTGCCCAAGATCTGCGAGGTGGAGGCAGTCGGCATGG 140870
Query 80456 GGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATAT---CCTCGCGCAAATCTG 80512
| ||| || ||| ||||| | ||| |||| |||||| | ||| | | | | |
Sbjct 140869 GAGCGAGCAGCAGACTGTTCCGGACGCCATGCTCCTTGATCTTGGCCTTGAG---AGC-G 140814
Query 80513 ACCAAAAATCAACCCCA-ACGCTG-------TGACC--CCACATGTCGTGCTGCAAGATG 80562
|| ||| |||| | |||| |||| ||||||||||| ||| | |||
Sbjct 140813 TCC------CAATCCCACAGGCTGGTCGGCTTGACGTTCCACATGTCGTACTGGAGGATA 140760
Query 80563 CCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTGGCCAGCTCA 80622
|||| || | ||||| || || | ||| ||||||||| | | |||||| || ||
Sbjct 140759 CCCTGGGAGACAGGAGATCCTTCGTATGTCGGGTACGGGCCTTGCTCCTTGGCGAGGTCG 140700
Query 80623 CACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTCACACCGCGC 80682
||||| || | | ||||| || || ||| || |||| |||||||| | ||
Sbjct 140699 CACGAAGCCGTCAACGCCGCATGGTAGATGGTTTCGAAGATCTGCTTGTTCAGCTCACGG 140640
Query 80683 GCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAGGCCCTGAACG 80742
|||| || ||||| | || | | | || ||| | || || || |||||||||
Sbjct 140639 GCCTCGGGAGACTCGAAAGGCATCCGGAGCGCCAAGAAGGCATCCGCGAGACCCTGAACG 140580
Query 80743 CCGATGGCGATCGGGCGGTGGCGCTTGTT-CGATCGCTCGGCCTCCGGAATTGGGTAAAA 80801
|||| | |||| |||||||||||| |||| | || | |||||| | |||||
Sbjct 140579 CCGACGCCGATGGGGCGGTGGCGCGTGTTGCTATTG-AAAGCCTCCTTGACCGGGTAGTG 140521
Query 80802 GTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACATCATGAAGTTT 80861
||| ||||||| |||||| ||||| || ||| | || || ||||| || ||
Sbjct 140520 GTTGACGTCGATGATCTTGTTCAGATTGCGGACGACCACCTGAGTGACCTCATGCAGCTT 140461
Query 80862 CTGAAAGTCGAA------TTGGTTCCCCTTCACAAATGCCGGAAGGCTCAGGGACGCCAG 80915
||| || ||| | || ||| | ||| || ||||| || ||| ||||
Sbjct 140460 CTGGAAATCGTAGACACCTTCGTTGTAATCCACGAACTGAGGAAGTGCCAAGGAGGCCAA 140401
Query 80916 ATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCACAAATTAGA 80975
||||| ||||| ||||| || | | | | |||||| |||||| ||||| | || ||
Sbjct 140400 GTTGCAGACGGCAACCTCATCGGGAGCAGAGTACTCGATGATTTCAGTGCAGAGGTTGGA 140341
Query 80976 AGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCA 81035
|||||| |||||||| |||||||| ||| ||||||| |||||||||
Sbjct 140340 GCTGCGAATTGTGCCCAGGTTCTTCTGGTTGCTCTTCCGGTTGCAATGATCCTTGTAGAG 140281
Query 81036 CATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAATCTCGCGCGC 81095
|||| | ||| | || |||||| ||| | || ||||||||| | ||| | || | ||
Sbjct 140280 CATGAAGGGGTTGCCAGTCTCGGTCTGAGCCTCGAGGATGGCATACCATAGCTTCTGGGC 140221
Query 81096 CTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTAAGCTTCGTCGAACTT 81155
||||||| |||||| | | || | | ||||| |||| | || ||||
Sbjct 140220 CTTGACCGTCTTGCGTCCGCGGTCCTCCTTCTCGTACTTCTCGTATAGAGCCTCAAACTC 140161
Query 81156 GGCACCGT-GAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGTGCCAGTCGG 81214
| |||| | || || | ||| | |||||||| || |||||||| || ||| ||
Sbjct 140160 TTCGCCGTAGCAG-TCGGCGAGACCGGGGCACTCATTGGGGCACATGAGCGTCCACTCCC 140102
Query 81215 TGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGC 81274
|| ||||| || |||||||||| || |||||||| | || ||| |||||||
Sbjct 140101 CGTTCTTCTCAACGCGCTTCATGAAAAGATCCGGGATCCACAAAGCAAGGAAGAGGTCGC 140042
Query 81275 G-GCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCC 81333
| ||| ||| |||| || | ||| ||||| || | || ||||| || | || ||
Sbjct 140041 GAGCA-CGCACCTCTTCCTTACCGTGGTTCTTCCGGAGGTCCAGAAACTCGAAGACATCG 139983
Query 81334 GCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTGCGACG------GCCACCCTGG 81387
|||||||| ||||| ||||| | ||| | | || | |||| ||| ||||||
Sbjct 139982 GCATGCCAAGGCTCAAGATATATGGCAAAGGCGCC---GGGACGCTTGTTGCCGCCCTGG 139926
Query 81388 TTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCATCTGACTGA 81447
| |||||| | ||| || ||| || || |||| ||| || ||||| || | || |
Sbjct 139925 TCGACGTACCTGGCCGTATTGTTGAAGACGCGCAGCATGGGAATGATGCCGTTGGAGGTA 139866
Query 81448 CCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTGATTGAAAGACCGATG 81507
||||| || || |||| || || |||| || | | ||| || || |||
Sbjct 139865 CCGTTTGTGCCGGCGATGTAGGAGCCGGTGGCACGGATGCGGTGGATGTTCAGGCCAATG 139806
Query 81508 CCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGATG 81567
|| || | | ||| || ||| || || || | || || || || |||||||||
Sbjct 139805 CCGCCGGCCATCTTGGAGATCATGGCGCAAGTCTTGAGCGTGTCGTAGATGCCCTCGATG 139746
Query 81568 CTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCT-TTTTGAGCCGGC 81626
|| || | |||||||| | || ||| ||| || | ||| || || || |||||
Sbjct 139745 CTGTCATCCTTCATGTCGACCAGGAAGCAGGACGAGAGCTG-GGCCTGGGGTGTACCGGC 139687
Query 81627 ATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTCATAGGTTTC 81686
||||| || || || | ||||| |||| | | | ||||| |||| || || ||
Sbjct 139686 GTTGAAGAGGGTCGGCGAAGCGTGTGTGAAGAACTTGCTCGACATGAGGTTGTATGTCTC 139627
Query 81687 CTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATAAACATGTACTG 81746
|||| || | | ||| || || |||| || || ||||| | ||||| |||
Sbjct 139626 AATGACTCGCTCGACGTTGTCTCCCCAGATGCCGACGGCAACGCGCATGATCATGTGCTG 139567
Query 81747 GGG 81749
||
Sbjct 139566 TGG 139564
>seq177
Length=70791
Score = 167 bits (184), Expect = 3e-36
Identities = 175/230 (76%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462
|| ||||| ||||| || ||||| || || ||||||||||| || |||||||| |||||
Sbjct 29618 ATCATGCAGATCTTCGTGAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCG 29559
Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522
| || | ||| | ||| | ||| |||| || |||||||||||||| || || || |||
Sbjct 29558 AGCGACACCATCGACAATGTCAAGTCTAAGATCCAGGACAAGGAGGGCATCCCGCCCGAC 29499
Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582
|||||||| ||||| ||||| || ||||| |||||||||| || || || | ||||||
Sbjct 29498 CAGCAGCGCCTAATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGGACTCTCTCCGACTAT 29439
Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|| |||| ||||| ||| || || || || | || || || |||||
Sbjct 29438 AACATCCAGAAGGAGAGCACCCTCCACCTTGTGCTCCGCCTGCGTGGTGG 29389
>seq32
Length=147543
Score = 154 bits (170), Expect = 2e-32
Identities = 156/203 (77%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489
||||| ||||| || || || ||||| || || |||| ||| | ||| | ||| |
Sbjct 70802 ACCGGAAAGACCATCACCCTCGAGGTGGAATCGTCCGATACCATCGATAATGTCAAGTCG 70861
Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549
|| |||||||| |||||||| ||||| || ||||||||||| || ||||| || || |||
Sbjct 70862 AAGATTCAGGATAAGGAGGGTATTCCGCCTGACCAGCAGCGCCTGATTTTCGCGGGCAAG 70921
Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609
|| |||||||||| ||||||||| | || || ||| |||| ||||| || || || |||
Sbjct 70922 CAGCTCGAGGATGGTCGTACCCTCTCGGATTACAATATCCAGAAGGAGTCGACGCTCCAT 70981
Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632
|| ||| | ||||| || |||||
Sbjct 70982 CTCGTCCTTCGTCTCCGTGGTGG 71004
Score = 140 bits (154), Expect = 4e-28
Identities = 169/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || ||||||||||| || || ||||| ||||| || ||||| || ||
Sbjct 71234 ATGCAGATTTTCGTCAAGACGCTCACAGGAAAGACGATTACGCTCGAGGTGGAATCTTCG 71293
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| || | ||| | || ||||||||||||||||| || || || || |||
Sbjct 71294 GACACAATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCGCCTGATCAG 71353
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || || || || ||||| | ||||||| ||| || || | ||||| |||
Sbjct 71354 CAGCGTCTCATCTTCGCGGGCAAGCAGTTGGAGGATGGTCGGACTCTGTCTGACTACAAT 71413
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635
|||| ||||| ||| || || | || ||||||| || ||||| ||
Sbjct 71414 ATCCAGAAGGAGAGCACACTGCACTTGGTGCTGCGTCTCCGTGGTGGCCA 71463
Score = 125 bits (138), Expect = 8e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || |||||||| || || |||||||| || || | ||||| |||||
Sbjct 71006 ATGCAAATTTTCGTCAAGACTCTGACTGGCAAGACGATCACGTTGGAGGTGGAGTCCTCG 71065
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| || | || | || || |||||||||||||| || || || || ||
Sbjct 71066 GACACCATTGACAACGTCAAATCAAAGATCCAGGACAAGGAGGGCATCCCGCCTGATCAA 71125
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || || || || ||||| | ||||| | ||| ||||| | ||||| ||
Sbjct 71126 CAGCGTCTCATCTTCGCGGGCAAGCAGTTGGAGGACGGTCGGACCCTGTCCGACTACAAC 71185
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| |||||| || | || | ||||| || |||||
Sbjct 71186 ATCCAGAAGGAGAGCACTCTGCACTTGGTTCTCCGTCTGCGTGGTGG 71232
>seq20
Length=161045
Score = 147 bits (162), Expect = 2e-30
Identities = 149/194 (77%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 27402 TATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTC 27461
|||| |||| ||||| || ||||| || || || |||||||| || || ||||| |||||
Sbjct 65660 TATAGTGCAGATCTTCGTGAAGACCCTCACGGGTAAGACTATCACCCTCGAGGTCGAGTC 65601
Query 27462 AGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGA 27521
|||| ||| | ||| | ||| | || || |||||||||||||| || || |||||
Sbjct 65600 CTCGGATACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCCCCAGA 65541
Query 27522 CCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTA 27581
||||||||| || || ||||| || ||||| |||||||| | |||||||| | |||||
Sbjct 65540 CCAGCAGCGCCTGATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGTACCCTCTCTGACTA 65481
Query 27582 TAATGTCCAAAAGG 27595
|| | |||||||
Sbjct 65480 CAACATTCAAAAGG 65467
>seq320
Length=41428
Score = 129 bits (142), Expect = 7e-25
Identities = 305/449 (68%), Gaps = 10/449 (2%)
Strand=Plus/Plus
Query 31959 CAAGCGGTCCATTCCACACGTGGCGGACGGCCTCAAGCCTTCACAGCGCAAGGTGATATA 32018
|| |||||| ||||| | ||| |||||||| ||||| ||||||||||| || ||
Sbjct 24991 CATGCGGTCTATTCCGTCCATGGTTGACGGCCTGAAGCCCGGTCAGCGCAAGGTCATCTA 25050
Query 32019 CGCCTGCC-TCAAGAAGAACCT-GTCGAGTGACATGAAGGTGGCGCAGCTGTCGGGCTAC 32076
| |||| ||||| |||||| ||| || ||| ||||| || || | | || |||
Sbjct 25051 TG-GTGCCTTCAAGCGGAACCTCGTC-AGCGACCAAAAGGTTGCCGAGTTTGCCGGTTAC 25108
Query 32077 GTGGCAGAGCAAACGGCCTATCACCACGGCGAGGCGTCGCTCCAGGGCACCATTGTCAAC 32136
|| | ||| | || || |||||||| ||||||||||| ||| || || | |
Sbjct 25109 GTCTCCGAGGTGGCCGCATACCACCACGGGGAGGCGTCGCTGCAGCAGACAATCATTGGC 25168
Query 32137 CTTGCTCAGAACTTTGTCGGTGCAAATAACCTGAACTTACTCGAGCCATCTGGACAGTTT 32196
|| || ||||||| || || | |||||| | |||| || ||||| || | |||
Sbjct 25169 CTAGCGCAGAACTACGTTGGATCTAATAACGTCAACTGCCTGGAGCCTAGCGGCAACTTT 25228
Query 32197 GGGACCCGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCCGTTACATCTTCACCCG--TC 32254
|| | || || | |||||| ||| || |||||| | ||||||||| ||| || |
Sbjct 25229 GGTTCGCGTCTGTCTGGTGGCTCGGACGCCGCGAGCGCTCGTTACATCCACACGCGCCTG 25288
Query 32255 TCGCACCTTCGACGCGCAAG-ATTTTCGACCCGTCGGACGATGCGGTGCTCAAGTACAAT 32313
|||| |||| | | ||| | || |||| | || ||||| | ||| ||||| |
Sbjct 25289 TCGC-CCTTTGCCCGGCACGTGTTCTCGAAGC-TC-GACGAGCCCAATCTCGAGTACCAG 25345
Query 32314 TTTGATGACGGTCAGCGGGTCGAGCCGGTGTTCTACAGTCCGGTGCTTCCGATGATCTTG 32373
|| || ||||| | | ||||||| | ||||| ||||| | || ||| | ||
Sbjct 25346 TTCGACGACGGCCGCATGATCGAGCCCAAGGTCTACGCCCCGGTCATCCCCATGGTTCTG 25405
Query 32374 GTGAACGGTGCAGAAGGCATCGGAACGGG 32402
|| |||||||| || || ||||| |||||
Sbjct 25406 GTCAACGGTGCCGACGGTATCGGCACGGG 25434
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570304668380480
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