Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09] 804 sequences; 36,704,944 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq12 300 2e-76 seq177 167 3e-36 seq32 154 2e-32 seq20 147 2e-30 seq320 129 7e-25 >seq12 Length=176190 Score = 300 bits (332), Expect = 2e-76 Identities = 1162/1803 (64%), Gaps = 71/1803 (4%) Strand=Plus/Minus Query 79987 GCCGCCTGATCAACGGGTACCGTCACCTGAATTGGCTTGGCCTTTGCCCGCGTCCGCAGA 80046 ||| ||||||| |||| | | ||| || || | ||| ||| | || || || Sbjct 141335 GCCTCCTGATCGACGG------TGAACTGGATAGGTTGGGCTGCAGCCTGGGTGCGGAGG 141282 Query 80047 TAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAACTGAGCTTC 80106 |||||||||||||||||||| ||| |||||||||| | |||||| ||| ||| Sbjct 141281 TAGTACATGCCCGTCTTGAGACCCAACTTCCAGCCGGTGAAGTGCATGCTGGTGATCTTG 141222 Query 80107 GCAAGTGTGGGGTTCTC-CATGAAGATGTTCAGAGACTGAGACTGACAGATGAAAGCCCC 80165 | | || || ||| | |||| |||||| || ||||| ||||| |||||| || || Sbjct 141221 CCCATGGTCGG-TTCACGCATGTGGATGTTGAGCGACTGGGACTGGTCGATGAAGGCTCC 141163 Query 80166 ACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCATACTGTACGATACA- 80224 ||| || |||||||| | | | | |||| ||||||||| ||||| || | Sbjct 141162 ACGGTCGGCCGCCATCTGGACGACGGTACGCTGTGAAATTTCCCAGACTGTCTTGTAGAG 141103 Query 80225 --CCTTACGAAGCTCCTCTGGAATGTCCAGATTTTGCACACTGCCACCGTCCTTT----A 80278 |||| | || |||| |||| || | | | | | |||| |||| | Sbjct 141102 TGCCTTGATA---TCGGCTGGGATGTTGGGAATGTTCTGAATCGAACCG-CCTTCGGCGA 141047 Query 80279 CAATTTGATTTTTCAATTCAGACGTCCAGACACCAAGCTTGTGCAGATCTTTCACAAG-- 80336 || |||| |||| | || ||| | ||| | | | || || |||| ||| Sbjct 141046 TGATGCGATTCTTCATGTTGTCCGACCACAGACCCATATCGACGAGGTCCTTCAGAAGCC 140987 Query 80337 -GTGCTTGTTAATCATGACAAACTCTCCCGCGAGGGTGCGACGCAGATACAGGTTTGTAG 80395 | | ||| | | || ||||| || || || || ||| | || | || | | Sbjct 140986 AGGGGTTGACGA-CTTGG--AACTCGCCGGCAAGCACACGTCGCTGGTAAATATTGGACG 140930 Query 80396 TGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCTCGCCGTCGGCATCG 80455 |||||||||| || |||||||| || | |||||| | ||| || |||||||| | Sbjct 140929 TGTAAGGCTCGAAGCATTCGTTGTTGCCCAAGATCTGCGAGGTGGAGGCAGTCGGCATGG 140870 Query 80456 GGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATAT---CCTCGCGCAAATCTG 80512 | ||| || ||| ||||| | ||| |||| |||||| | ||| | | | | | Sbjct 140869 GAGCGAGCAGCAGACTGTTCCGGACGCCATGCTCCTTGATCTTGGCCTTGAG---AGC-G 140814 Query 80513 ACCAAAAATCAACCCCA-ACGCTG-------TGACC--CCACATGTCGTGCTGCAAGATG 80562 || ||| |||| | |||| |||| ||||||||||| ||| | ||| Sbjct 140813 TCC------CAATCCCACAGGCTGGTCGGCTTGACGTTCCACATGTCGTACTGGAGGATA 140760 Query 80563 CCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTGGCCAGCTCA 80622 |||| || | ||||| || || | ||| ||||||||| | | |||||| || || Sbjct 140759 CCCTGGGAGACAGGAGATCCTTCGTATGTCGGGTACGGGCCTTGCTCCTTGGCGAGGTCG 140700 Query 80623 CACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTCACACCGCGC 80682 ||||| || | | ||||| || || ||| || |||| |||||||| | || Sbjct 140699 CACGAAGCCGTCAACGCCGCATGGTAGATGGTTTCGAAGATCTGCTTGTTCAGCTCACGG 140640 Query 80683 GCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAGGCCCTGAACG 80742 |||| || ||||| | || | | | || ||| | || || || ||||||||| Sbjct 140639 GCCTCGGGAGACTCGAAAGGCATCCGGAGCGCCAAGAAGGCATCCGCGAGACCCTGAACG 140580 Query 80743 CCGATGGCGATCGGGCGGTGGCGCTTGTT-CGATCGCTCGGCCTCCGGAATTGGGTAAAA 80801 |||| | |||| |||||||||||| |||| | || | |||||| | ||||| Sbjct 140579 CCGACGCCGATGGGGCGGTGGCGCGTGTTGCTATTG-AAAGCCTCCTTGACCGGGTAGTG 140521 Query 80802 GTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACATCATGAAGTTT 80861 ||| ||||||| |||||| ||||| || ||| | || || ||||| || || Sbjct 140520 GTTGACGTCGATGATCTTGTTCAGATTGCGGACGACCACCTGAGTGACCTCATGCAGCTT 140461 Query 80862 CTGAAAGTCGAA------TTGGTTCCCCTTCACAAATGCCGGAAGGCTCAGGGACGCCAG 80915 ||| || ||| | || ||| | ||| || ||||| || ||| |||| Sbjct 140460 CTGGAAATCGTAGACACCTTCGTTGTAATCCACGAACTGAGGAAGTGCCAAGGAGGCCAA 140401 Query 80916 ATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCACAAATTAGA 80975 ||||| ||||| ||||| || | | | | |||||| |||||| ||||| | || || Sbjct 140400 GTTGCAGACGGCAACCTCATCGGGAGCAGAGTACTCGATGATTTCAGTGCAGAGGTTGGA 140341 Query 80976 AGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCA 81035 |||||| |||||||| |||||||| ||| ||||||| ||||||||| Sbjct 140340 GCTGCGAATTGTGCCCAGGTTCTTCTGGTTGCTCTTCCGGTTGCAATGATCCTTGTAGAG 140281 Query 81036 CATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAATCTCGCGCGC 81095 |||| | ||| | || |||||| ||| | || ||||||||| | ||| | || | || Sbjct 140280 CATGAAGGGGTTGCCAGTCTCGGTCTGAGCCTCGAGGATGGCATACCATAGCTTCTGGGC 140221 Query 81096 CTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTAAGCTTCGTCGAACTT 81155 ||||||| |||||| | | || | | ||||| |||| | || |||| Sbjct 140220 CTTGACCGTCTTGCGTCCGCGGTCCTCCTTCTCGTACTTCTCGTATAGAGCCTCAAACTC 140161 Query 81156 GGCACCGT-GAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGTGCCAGTCGG 81214 | |||| | || || | ||| | |||||||| || |||||||| || ||| || Sbjct 140160 TTCGCCGTAGCAG-TCGGCGAGACCGGGGCACTCATTGGGGCACATGAGCGTCCACTCCC 140102 Query 81215 TGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGC 81274 || ||||| || |||||||||| || |||||||| | || ||| ||||||| Sbjct 140101 CGTTCTTCTCAACGCGCTTCATGAAAAGATCCGGGATCCACAAAGCAAGGAAGAGGTCGC 140042 Query 81275 G-GCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCC 81333 | ||| ||| |||| || | ||| ||||| || | || ||||| || | || || Sbjct 140041 GAGCA-CGCACCTCTTCCTTACCGTGGTTCTTCCGGAGGTCCAGAAACTCGAAGACATCG 139983 Query 81334 GCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTGCGACG------GCCACCCTGG 81387 |||||||| ||||| ||||| | ||| | | || | |||| ||| |||||| Sbjct 139982 GCATGCCAAGGCTCAAGATATATGGCAAAGGCGCC---GGGACGCTTGTTGCCGCCCTGG 139926 Query 81388 TTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCATCTGACTGA 81447 | |||||| | ||| || ||| || || |||| ||| || ||||| || | || | Sbjct 139925 TCGACGTACCTGGCCGTATTGTTGAAGACGCGCAGCATGGGAATGATGCCGTTGGAGGTA 139866 Query 81448 CCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTGATTGAAAGACCGATG 81507 ||||| || || |||| || || |||| || | | ||| || || ||| Sbjct 139865 CCGTTTGTGCCGGCGATGTAGGAGCCGGTGGCACGGATGCGGTGGATGTTCAGGCCAATG 139806 Query 81508 CCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGATG 81567 || || | | ||| || ||| || || || | || || || || ||||||||| Sbjct 139805 CCGCCGGCCATCTTGGAGATCATGGCGCAAGTCTTGAGCGTGTCGTAGATGCCCTCGATG 139746 Query 81568 CTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCT-TTTTGAGCCGGC 81626 || || | |||||||| | || ||| ||| || | ||| || || || ||||| Sbjct 139745 CTGTCATCCTTCATGTCGACCAGGAAGCAGGACGAGAGCTG-GGCCTGGGGTGTACCGGC 139687 Query 81627 ATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTCATAGGTTTC 81686 ||||| || || || | ||||| |||| | | | ||||| |||| || || || Sbjct 139686 GTTGAAGAGGGTCGGCGAAGCGTGTGTGAAGAACTTGCTCGACATGAGGTTGTATGTCTC 139627 Query 81687 CTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATAAACATGTACTG 81746 |||| || | | ||| || || |||| || || ||||| | ||||| ||| Sbjct 139626 AATGACTCGCTCGACGTTGTCTCCCCAGATGCCGACGGCAACGCGCATGATCATGTGCTG 139567 Query 81747 GGG 81749 || Sbjct 139566 TGG 139564 >seq177 Length=70791 Score = 167 bits (184), Expect = 3e-36 Identities = 175/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || ||||| ||||| || ||||| || || ||||||||||| || |||||||| ||||| Sbjct 29618 ATCATGCAGATCTTCGTGAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCG 29559 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 | || | ||| | ||| | ||| |||| || |||||||||||||| || || || ||| Sbjct 29558 AGCGACACCATCGACAATGTCAAGTCTAAGATCCAGGACAAGGAGGGCATCCCGCCCGAC 29499 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 |||||||| ||||| ||||| || ||||| |||||||||| || || || | |||||| Sbjct 29498 CAGCAGCGCCTAATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGGACTCTCTCCGACTAT 29439 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || |||| ||||| ||| || || || || | || || || ||||| Sbjct 29438 AACATCCAGAAGGAGAGCACCCTCCACCTTGTGCTCCGCCTGCGTGGTGG 29389 >seq32 Length=147543 Score = 154 bits (170), Expect = 2e-32 Identities = 156/203 (77%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 ||||| ||||| || || || ||||| || || |||| ||| | ||| | ||| | Sbjct 70802 ACCGGAAAGACCATCACCCTCGAGGTGGAATCGTCCGATACCATCGATAATGTCAAGTCG 70861 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || |||||||| |||||||| ||||| || ||||||||||| || ||||| || || ||| Sbjct 70862 AAGATTCAGGATAAGGAGGGTATTCCGCCTGACCAGCAGCGCCTGATTTTCGCGGGCAAG 70921 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 || |||||||||| ||||||||| | || || ||| |||| ||||| || || || ||| Sbjct 70922 CAGCTCGAGGATGGTCGTACCCTCTCGGATTACAATATCCAGAAGGAGTCGACGCTCCAT 70981 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 || ||| | ||||| || ||||| Sbjct 70982 CTCGTCCTTCGTCTCCGTGGTGG 71004 Score = 140 bits (154), Expect = 4e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || ||||||||||| || || ||||| ||||| || ||||| || || Sbjct 71234 ATGCAGATTTTCGTCAAGACGCTCACAGGAAAGACGATTACGCTCGAGGTGGAATCTTCG 71293 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| || | ||| | || ||||||||||||||||| || || || || ||| Sbjct 71294 GACACAATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCGCCTGATCAG 71353 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || || || ||||| | ||||||| ||| || || | ||||| ||| Sbjct 71354 CAGCGTCTCATCTTCGCGGGCAAGCAGTTGGAGGATGGTCGGACTCTGTCTGACTACAAT 71413 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 |||| ||||| ||| || || | || ||||||| || ||||| || Sbjct 71414 ATCCAGAAGGAGAGCACACTGCACTTGGTGCTGCGTCTCCGTGGTGGCCA 71463 Score = 125 bits (138), Expect = 8e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || |||||||| || || |||||||| || || | ||||| ||||| Sbjct 71006 ATGCAAATTTTCGTCAAGACTCTGACTGGCAAGACGATCACGTTGGAGGTGGAGTCCTCG 71065 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| || | || | || || |||||||||||||| || || || || || Sbjct 71066 GACACCATTGACAACGTCAAATCAAAGATCCAGGACAAGGAGGGCATCCCGCCTGATCAA 71125 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || || || ||||| | ||||| | ||| ||||| | ||||| || Sbjct 71126 CAGCGTCTCATCTTCGCGGGCAAGCAGTTGGAGGACGGTCGGACCCTGTCCGACTACAAC 71185 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| |||||| || | || | ||||| || ||||| Sbjct 71186 ATCCAGAAGGAGAGCACTCTGCACTTGGTTCTCCGTCTGCGTGGTGG 71232 >seq20 Length=161045 Score = 147 bits (162), Expect = 2e-30 Identities = 149/194 (77%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 27402 TATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTC 27461 |||| |||| ||||| || ||||| || || || |||||||| || || ||||| ||||| Sbjct 65660 TATAGTGCAGATCTTCGTGAAGACCCTCACGGGTAAGACTATCACCCTCGAGGTCGAGTC 65601 Query 27462 AGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGA 27521 |||| ||| | ||| | ||| | || || |||||||||||||| || || ||||| Sbjct 65600 CTCGGATACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCCCCAGA 65541 Query 27522 CCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTA 27581 ||||||||| || || ||||| || ||||| |||||||| | |||||||| | ||||| Sbjct 65540 CCAGCAGCGCCTGATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGTACCCTCTCTGACTA 65481 Query 27582 TAATGTCCAAAAGG 27595 || | ||||||| Sbjct 65480 CAACATTCAAAAGG 65467 >seq320 Length=41428 Score = 129 bits (142), Expect = 7e-25 Identities = 305/449 (68%), Gaps = 10/449 (2%) Strand=Plus/Plus Query 31959 CAAGCGGTCCATTCCACACGTGGCGGACGGCCTCAAGCCTTCACAGCGCAAGGTGATATA 32018 || |||||| ||||| | ||| |||||||| ||||| ||||||||||| || || Sbjct 24991 CATGCGGTCTATTCCGTCCATGGTTGACGGCCTGAAGCCCGGTCAGCGCAAGGTCATCTA 25050 Query 32019 CGCCTGCC-TCAAGAAGAACCT-GTCGAGTGACATGAAGGTGGCGCAGCTGTCGGGCTAC 32076 | |||| ||||| |||||| ||| || ||| ||||| || || | | || ||| Sbjct 25051 TG-GTGCCTTCAAGCGGAACCTCGTC-AGCGACCAAAAGGTTGCCGAGTTTGCCGGTTAC 25108 Query 32077 GTGGCAGAGCAAACGGCCTATCACCACGGCGAGGCGTCGCTCCAGGGCACCATTGTCAAC 32136 || | ||| | || || |||||||| ||||||||||| ||| || || | | Sbjct 25109 GTCTCCGAGGTGGCCGCATACCACCACGGGGAGGCGTCGCTGCAGCAGACAATCATTGGC 25168 Query 32137 CTTGCTCAGAACTTTGTCGGTGCAAATAACCTGAACTTACTCGAGCCATCTGGACAGTTT 32196 || || ||||||| || || | |||||| | |||| || ||||| || | ||| Sbjct 25169 CTAGCGCAGAACTACGTTGGATCTAATAACGTCAACTGCCTGGAGCCTAGCGGCAACTTT 25228 Query 32197 GGGACCCGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCCGTTACATCTTCACCCG--TC 32254 || | || || | |||||| ||| || |||||| | ||||||||| ||| || | Sbjct 25229 GGTTCGCGTCTGTCTGGTGGCTCGGACGCCGCGAGCGCTCGTTACATCCACACGCGCCTG 25288 Query 32255 TCGCACCTTCGACGCGCAAG-ATTTTCGACCCGTCGGACGATGCGGTGCTCAAGTACAAT 32313 |||| |||| | | ||| | || |||| | || ||||| | ||| ||||| | Sbjct 25289 TCGC-CCTTTGCCCGGCACGTGTTCTCGAAGC-TC-GACGAGCCCAATCTCGAGTACCAG 25345 Query 32314 TTTGATGACGGTCAGCGGGTCGAGCCGGTGTTCTACAGTCCGGTGCTTCCGATGATCTTG 32373 || || ||||| | | ||||||| | ||||| ||||| | || ||| | || Sbjct 25346 TTCGACGACGGCCGCATGATCGAGCCCAAGGTCTACGCCCCGGTCATCCCCATGGTTCTG 25405 Query 32374 GTGAACGGTGCAGAAGGCATCGGAACGGG 32402 || |||||||| || || ||||| ||||| Sbjct 25406 GTCAACGGTGCCGACGGTATCGGCACGGG 25434 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570304668380480