Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09] 804 sequences; 36,704,944 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq32 114 8e-21 seq177 100 2e-16 >seq32 Length=147543 Score = 114 bits (126), Expect = 8e-21 Identities = 159/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||||| || |||||||||||||| || ||||| || || || || || || Sbjct 71223 AGACGGAGAACCAAGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGTCCGA 71164 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||| || | || || || || || || | ||||||||| || ||||| | |||||| Sbjct 71163 CCGTCCTCCAACTGCTTGCCCGCGAAGATGAGACGCTGTTGATCAGGCGGGATGCCCTCC 71104 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| |||| |||| ||| ||| | ||| ||||| | |||||| |||| || Sbjct 71103 TTGTCCTGGATC-TTTGATTTGACGTTGTCAATGGTGTCCGAGGACTCCACCTCCAACGT 71045 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 ||||| || || || | || || || ||||| |||||| Sbjct 71044 GATCGTCTTGCCAGTCAGAGTCTTGACGAAAATTTGCATG 71005 Score = 91.5 bits (100), Expect = 9e-14 Identities = 153/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||||| |||||| || || ||||||||||| || || || || || || || || || Sbjct 71451 AGACGCAGCACCAAGTGCAGTGTGCTCTCCTTCTGGATATTGTAGTCAGACAGAGTCCGA 71392 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || || | || || || || || || | |||||| || || ||||| | |||||| Sbjct 71391 CCATCCTCCAACTGCTTGCCCGCGAAGATGAGACGCTGCTGATCAGGCGGGATGCCCTCC 71332 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| ||| || | || ||| | ||||||||| ||||| || | || Sbjct 71331 TTGTC-CTGAATCTTGGACTTGACGTTGTCAATTGTGTCCGAAGATTCCACCTCGAGCGT 71273 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| || || || | ||| || || ||||||||||| Sbjct 71272 AATCGTCTTTCCTGTGAGCGTCTTGACGAAAATCTGCAT 71234 >seq177 Length=70791 Score = 100 bits (110), Expect = 2e-16 Identities = 149/206 (72%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 ||||| ||||||||||| || |||||||| || || || || || | || || || || Sbjct 29413 TGGAGGGTGCTCTCCTTCTGGATGTTATAGTCGGAGAGAGTCCGGCCATCCTCGAGCTGC 29472 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 || |||||||| |||| ||||| ||||| ||||| | ||||||||||| |||| || Sbjct 29473 TTGCCGGCAAAGATTAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATC-TT 29531 Query 34624 TGTTTTAACGAT-AAAATTGTGTC-TTCGCTCTCCACTTCCACGGTTATCGTTTTACCGG 34681 | || || | || ||||| ||| |||||| || | ||| || || || || | Sbjct 29532 AGACTTGACATTGTCGATGGTGTCGCTCG-ACTCCACCTCAAGGGTGATAGTCTTGCCCG 29590 Query 34682 TTAACGTTTTCACAAAAATCTGCATG 34707 | | || ||||| || ||||||||| Sbjct 29591 TGAGGGTCTTCACGAAGATCTGCATG 29616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314726516043332