Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09]
804 sequences; 36,704,944 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq32 114 8e-21
seq177 100 2e-16
>seq32
Length=147543
Score = 114 bits (126), Expect = 8e-21
Identities = 159/220 (72%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | ||||| || |||||||||||||| || ||||| || || || || || ||
Sbjct 71223 AGACGGAGAACCAAGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGTCCGA 71164
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
|||| || | || || || || || || | ||||||||| || ||||| | ||||||
Sbjct 71163 CCGTCCTCCAACTGCTTGCCCGCGAAGATGAGACGCTGTTGATCAGGCGGGATGCCCTCC 71104
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
||||| |||| |||| ||| ||| | ||| ||||| | |||||| |||| ||
Sbjct 71103 TTGTCCTGGATC-TTTGATTTGACGTTGTCAATGGTGTCCGAGGACTCCACCTCCAACGT 71045
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
||||| || || || | || || || ||||| ||||||
Sbjct 71044 GATCGTCTTGCCAGTCAGAGTCTTGACGAAAATTTGCATG 71005
Score = 91.5 bits (100), Expect = 9e-14
Identities = 153/219 (70%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||||| |||||| || || ||||||||||| || || || || || || || || ||
Sbjct 71451 AGACGCAGCACCAAGTGCAGTGTGCTCTCCTTCTGGATATTGTAGTCAGACAGAGTCCGA 71392
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| || || | || || || || || || | |||||| || || ||||| | ||||||
Sbjct 71391 CCATCCTCCAACTGCTTGCCCGCGAAGATGAGACGCTGCTGATCAGGCGGGATGCCCTCC 71332
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
||||| ||| || | || ||| | ||||||||| ||||| || | ||
Sbjct 71331 TTGTC-CTGAATCTTGGACTTGACGTTGTCAATTGTGTCCGAAGATTCCACCTCGAGCGT 71273
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||||| || || || | ||| || || |||||||||||
Sbjct 71272 AATCGTCTTTCCTGTGAGCGTCTTGACGAAAATCTGCAT 71234
>seq177
Length=70791
Score = 100 bits (110), Expect = 2e-16
Identities = 149/206 (72%), Gaps = 4/206 (2%)
Strand=Plus/Plus
Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563
||||| ||||||||||| || |||||||| || || || || || | || || || ||
Sbjct 29413 TGGAGGGTGCTCTCCTTCTGGATGTTATAGTCGGAGAGAGTCCGGCCATCCTCGAGCTGC 29472
Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623
|| |||||||| |||| ||||| ||||| ||||| | ||||||||||| |||| ||
Sbjct 29473 TTGCCGGCAAAGATTAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATC-TT 29531
Query 34624 TGTTTTAACGAT-AAAATTGTGTC-TTCGCTCTCCACTTCCACGGTTATCGTTTTACCGG 34681
| || || | || ||||| ||| |||||| || | ||| || || || || |
Sbjct 29532 AGACTTGACATTGTCGATGGTGTCGCTCG-ACTCCACCTCAAGGGTGATAGTCTTGCCCG 29590
Query 34682 TTAACGTTTTCACAAAAATCTGCATG 34707
| | || ||||| || |||||||||
Sbjct 29591 TGAGGGTCTTCACGAAGATCTGCATG 29616
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314726516043332
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |