Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09] 804 sequences; 36,704,944 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq183 145 7e-30 >seq183 Length=69340 Score = 145 bits (160), Expect = 7e-30 Identities = 245/352 (70%), Gaps = 2/352 (1%) Strand=Plus/Plus Query 34268 GAGCTGCTGTGGTTCGTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTG 34327 ||||| || |||||| | ||| | ||| | | || ||| || |||| |||||| Sbjct 62947 GAGCTCCTCTGGTTCATATCGGGCGACACCTCCTCGCAGTCGCTGTCCTCCCAAGGGGTG 63006 Query 34328 AAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGG 34387 ||||||||||| | |||| || || || || || ||||| | || | | || || Sbjct 63007 AAGATCTGGGATGGCAACGGCTCACGCGAGTTCCTCGACAACCTCGGACTGACGTCGCGC 63066 Query 34388 GAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTAT 34447 ||| ||| || ||||||| |||||||| ||||||||| |||||||||| || || || Sbjct 63067 GAGACGGGGGATCTGGGCCCCGTCTACGGCTTCCAGTGGCGACACTTTGGCGCTGACTA- 63125 Query 34448 CGGGGGAGCGAAG-CGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGA 34506 || | || ||| ||||||| ||||| ||||| | ||||||||| | | | ||| | Sbjct 63126 CGTCGACGCCAAGACGGACTACTCGGGCCAGGGCGTCGACCAGCTGGCGCGCATCATCCA 63185 Query 34507 CACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGA 34566 |||| | ||| |||||| ||| | || |||| | | ||||||||||| || Sbjct 63186 CACCCTCAAGACGAACCCCTTCGACCGGCGGCTCGTCCTCTCGGCGTGGAACCCAGCCGA 63245 Query 34567 TCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTC 34618 || || ||||| ||| || || ||||||| | ||| ||||||||| Sbjct 63246 CCTGCCCAAGATGGTGCTTCCGCCATGCCACATGTTTGCCCAGTTCTACGTC 63297 Score = 145 bits (160), Expect = 7e-30 Identities = 245/352 (70%), Gaps = 2/352 (1%) Strand=Plus/Minus Query 6727 GACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGG 6786 ||||||||| ||| | ||||||| || || ||| ||||| || || || || Sbjct 63297 GACGTAGAACTGGGCAAACATGTGGCATGGCGGAAGCACCATCTTGGGCAGGTCGGCTGG 63238 Query 6787 GTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCAC 6846 ||||||||| | | |||| || | ||| |||||| ||| | ||||| ||| | Sbjct 63237 GTTCCACGCCGAGAGGACGAGCCGCCGGTCGAAGGGGTTCGTCTTGAGGGTGTGGATGAT 63178 Query 6847 GTACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCG-CTTCGCTCCCCCGATACTCCG 6905 | | ||||||||| | ||||| ||||| ||||||| ||| || | || || || | Sbjct 63177 GCGCGCCAGCTGGTCGACGCCCTGGCCCGAGTAGTCCGTCTTGGCGTCGACG-TAGTCAG 63119 Query 6906 CCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATG 6965 | |||||||||| ||||||||| |||||||| ||||||| || ||| ||| || || | Sbjct 63118 CGCCAAAGTGTCGCCACTGGAAGCCGTAGACGGGGCCCAGATCCCCCGTCTCGCGCGACG 63059 Query 6966 GGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCCC 7025 | || | ||||| || || || || || |||| | ||||||||||||||||| Sbjct 63058 TCAGTCCGAGGTTGTCGAGGAACTCGCGTGAGCCGTTGCCATCCCAGATCTTCACCCCTT 62999 Query 7026 GGGACGAGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTC 7077 |||| || ||| || | | ||| | ||| | |||||| || ||||| Sbjct 62998 GGGAGGACAGCGACTGCGAGGAGGTGTCGCCCGATATGAACCAGAGGAGCTC 62947 Score = 102 bits (112), Expect = 7e-17 Identities = 156/215 (73%), Gaps = 8/215 (4%) Strand=Plus/Plus Query 34636 CTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAG 34695 ||| ||||| || || || || | ||||||||| | || |||||||||||||| || || Sbjct 63423 CTGTCAGCTGTACCAGCGTTCCTGTGACATGGGGCTGGGCGTGCCGTTCAACATCGCCAG 63482 Query 34696 TTACGCTCTGCTCACGTACATGATCGCTCATGTCGTG-GGGTTGGTTCCTGGGGAG-CTG 34753 ||||| ||||| || ||||| | || || || ||| ||||||| ||| ||| || ||| Sbjct 63483 CTACGCGCTGCTGACACACATGGTGGCGCACGT-GTGCGGGTTGG-TCCCGGGCAGCCTG 63540 Query 34754 GTGCATACGT--TGGGGGATGCGCATATCTACCTGAACCACATCGAGCGGCTCCGGATCC 34811 || |||| |||| || || ||| ||||||||||||| ||| ||| || | Sbjct 63541 ACGC--ACGTCATGGGTGACGCCCATGTCTACCTGAACCATGTCGCCGCCCTCGAGACGC 63598 Query 34812 AGCTGCAACGAGAGCCCCGACCGTTCCCCCAGCTC 34846 ||||| || |||||||| |||||| | ||| Sbjct 63599 AGCTGGGCCGCGAGCCCCGCGACTTCCCCGAACTC 63633 Score = 102 bits (112), Expect = 7e-17 Identities = 156/215 (73%), Gaps = 8/215 (4%) Strand=Plus/Minus Query 6499 GAGCTGGGGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCCGCTCGATGTGGTT 6558 ||| | |||||| |||||||| || |||||| || ||| ||| ||||| Sbjct 63633 GAGTTCGGGGAAGTCGCGGGGCTCGCGGCCCAGCTGCGTCTCGAGGGCGGCGACATGGTT 63574 Query 6559 CAGGTAGATATGCGCATCCCCCA--ACGTATGCACCAG-CTCCCCAGGAACCAACCC-CA 6614 |||||||| ||| || || |||| |||| || ||| || ||| ||| ||||||| || Sbjct 63573 CAGGTAGACATGGGCGTCACCCATGACGT--GCGTCAGGCTGCCCGGGA-CCAACCCGCA 63517 Query 6615 CGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTA 6674 | || || || | ||||| || ||||| ||||| || || |||||||||||||| || | Sbjct 63516 C-ACGTGCGCCACCATGTGTGTCAGCAGCGCGTAGCTGGCGATGTTGAACGGCACGCCCA 63458 Query 6675 ACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAG 6709 ||||||||| | || || || || ||||| ||| Sbjct 63457 GCCCCATGTCACAGGAACGCTGGTACAGCTGACAG 63423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448257894962880