Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09]
804 sequences; 36,704,944 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq32 161 2e-34
seq177 154 3e-32
seq20 140 8e-28
seq12 96.9 8e-15
>seq32
Length=147543
Score = 161 bits (178), Expect = 2e-34
Identities = 163/212 (77%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || | ||| |||||| ||| || |||||||| || || | ||||||| || ||
Sbjct 71217 AGAACCAAGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGTCCGACCGTCC 71158
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||| ||||||||| |||||||| || || ||||| ||||| || | || |||||||||
Sbjct 71157 TCCAACTGCTTGCCCGCGAAGATGAGACGCTGTTGATCAGGCGGGATGCCCTCCTTGTCC 71098
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
||||||||| ||| ||||| || |||||||| ||| || ||||| | |||||||||
Sbjct 71097 TGGATCTTTGATTTGACGTTGTCAATGGTGTCCGAGGACTCCACCTCCAACGTGATCGTC 71038
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || |||||||| || || | |||||
Sbjct 71037 TTGCCAGTCAGAGTCTTGACGAAAATTTGCAT 71006
Score = 145 bits (160), Expect = 2e-29
Identities = 145/188 (77%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| || || || || ||||| || ||||| || ||||||| ||||| | |||||
Sbjct 70989 AGGACGAGATGGAGCGTCGACTCCTTCTGGATATTGTAATCCGAGAGGGTACGACCATCC 70930
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| ||||| || ||||| || |||||||| |||| || ||||| |||
Sbjct 70929 TCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCAGGCGGAATACCCTCCTTATCC 70870
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| ||||| || || || |||||||| || || ||| |||||||| ||||| |||
Sbjct 70869 TGAATCTTCGACTTGACATTATCGATGGTATCGGACGATTCCACCTCGAGGGTGATGGTC 70810
Query 211083 TTTCCCGT 211090
||||| ||
Sbjct 70809 TTTCCGGT 70802
Score = 143 bits (158), Expect = 6e-29
Identities = 159/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || | ||| || ||| ||| || ||||| || || || | || |||| |||||
Sbjct 71445 AGCACCAAGTGCAGTGTGCTCTCCTTCTGGATATTGTAGTCAGACAGAGTCCGACCATCC 71386
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||| ||||||||| |||||||| || || || || ||||| || | || |||||||||
Sbjct 71385 TCCAACTGCTTGCCCGCGAAGATGAGACGCTGCTGATCAGGCGGGATGCCCTCCTTGTCC 71326
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| ||||| || ||||| || || ||||| || ||| |||||||| || ||||||
Sbjct 71325 TGAATCTTGGACTTGACGTTGTCAATTGTGTCCGAAGATTCCACCTCGAGCGTAATCGTC 71266
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| ||||| ||||| || || | ||||||
Sbjct 71265 TTTCCTGTGAGCGTCTTGACGAAAATCTGCAT 71234
>seq177
Length=70791
Score = 154 bits (170), Expect = 3e-32
Identities = 164/215 (76%), Gaps = 6/215 (3%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| |||||||| || ||| ||| || ||||||||||| || | || |||| |||||
Sbjct 29404 AGCACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTATAGTCGGAGAGAGTCCGGCCATCC 29463
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| || ||||| ||||| || ||||| || || | || |||||||||
Sbjct 29464 TCGAGCTGCTTGCCGGCAAAGATTAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCC 29523
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATC 211079
|||||||| || || || ||||||||||| ||| || ||||| || |||||
Sbjct 29524 TGGATCTTAGACTTGACATTGTCGATGGTGTC---GCTCGACTCCACCTCAAGGGTGATA 29580
Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| |||||||| ||||| || || | ||||||
Sbjct 29581 GTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCAT 29615
>seq20
Length=161045
Score = 140 bits (154), Expect = 8e-28
Identities = 143/187 (76%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986
||||| ||||| || || | ||||| | || || || ||||||||||| || |||||
Sbjct 65469 TTTTGAATGTTGTAGTCAGAGAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATC 65528
Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046
||||| || ||||| || || | || ||||||||||||||||| || || || |||
Sbjct 65529 AGGCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCG 65588
Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAAC 211106
||||| || ||| || |||||||| ||||| ||||| |||||||| ||||| || ||
Sbjct 65589 ATGGTATCCGAGGACTCGACCTCGAGGGTGATAGTCTTACCCGTGAGGGTCTTCACGAAG 65648
Query 211107 ACCTGCA 211113
| |||||
Sbjct 65649 ATCTGCA 65655
>seq12
Length=176190
Score = 96.9 bits (106), Expect = 8e-15
Identities = 184/266 (69%), Gaps = 10/266 (4%)
Strand=Plus/Minus
Query 178093 GTTCTTTTGGTTGCTCTTTC---TGCAAATGGCATCTTTGTACGCAATGAAGGGCATTCC 178149
|||||| ||||||||||| | ||||| || ||| ||||| |||||||| | ||
Sbjct 140322 GTTCTTCTGGTTGCTCTTCCGGTTGCAA-TG--ATCCTTGTAGAGCATGAAGGGGTTGCC 140266
Query 178150 CACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTTT-- 178207
||| | |||||| |||| ||| || ||| |||| |||||| ||| |||||
Sbjct 140265 AGTCTCGGTCTGAGCCTCGAGGATGGCATACCATAGCTTCTGGGCCTTGACCGTCTTGCG 140206
Query 178208 TTGGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACA 178267
| || | | || ||||||||||| | ||| || |||| || || || |||
Sbjct 140205 TCCGCGGTCC--TCCTTCTCGTACTTCTCGTATAGAGCCTCAAACTCTTCGCCGTAGCAG 140148
Query 178268 TCATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACT 178327
|| |||||||||| |||||||||||| | ||| |||||| |||| | || ||
Sbjct 140147 TCGGCGAGACCGGGGCACTCATTGGGGCACATGAGCGTCCACTCCCCGTTCTTCTCAACG 140088
Query 178328 CGTTTCATGAAGAGGTCAGAGGTCCA 178353
|| |||||||| || || | | ||||
Sbjct 140087 CGCTTCATGAAAAGATCCGGGATCCA 140062
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159140059285460
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |