Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09]
804 sequences; 36,704,944 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq32 95.1 8e-15
seq20 91.5 1e-13
seq177 84.2 1e-11
>seq32
Length=147543
Score = 95.1 bits (104), Expect = 8e-15
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| |||||||| || || || || || || |||||||| | || || || ||| ||
Sbjct 71006 ATGCAAATTTTCGTCAAGACTCTGACTGGCAAGACGATCACGTTGGAGGTGGAGTCCTCG 71065
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| |||| | | ||| ||| || ||||| || || | ||||| ||||||
Sbjct 71066 GACACCATTGACAACGTCAAATCAAAGATCCAGGACAAGGAGGGCATCCCGCCTGATCAA 71125
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|||||| | || || || ||||| || |||| |||| || || | ||| ||||||
Sbjct 71126 CAGCGTCTCATCTTCGCGGGCAAGCAGTTGGAGGACGGTCGGACCCTGTCCGACTACAAC 71185
Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTT 23820
|| || || ||| ||| | || || |||
Sbjct 71186 ATCCAGAAGGAGAGCACTCTGCACTTGGTT 71215
Score = 93.3 bits (102), Expect = 3e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| || || ||||| ||||| ||||| || ||||| || || || ||
Sbjct 71234 ATGCAGATTTTCGTCAAGACGCTCACAGGAAAGACGATTACGCTCGAGGTGGAATCTTCG 71293
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| |||| | | || || ||| ||||| || || | ||||| |||||
Sbjct 71294 GACACAATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCGCCTGATCAG 71353
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|||||| | || || || ||||| || |||| || | || ||| | || |||||
Sbjct 71354 CAGCGTCTCATCTTCGCGGGCAAGCAGTTGGAGGATGGTCGGACTCTGTCTGACTACAAT 71413
Query 23791 ATACAAAAAGAGTCCACATTACATTTAGT 23819
|| || || ||| |||| | || || ||
Sbjct 71414 ATCCAGAAGGAGAGCACACTGCACTTGGT 71442
>seq20
Length=161045
Score = 91.5 bits (100), Expect = 1e-13
Identities = 138/194 (71%), Gaps = 2/194 (1%)
Strand=Plus/Minus
Query 23606 TTAAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACT 23665
||| | ||||||| ||||| || ||||||||||| || || ||||| ||||| || || |
Sbjct 65661 TTATAGTGCAGATCTTCGTGAAGACCCTCACGGGTAAGACTATCACCCTCGAGGTCGAGT 65602
Query 23666 CCACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCA 23724
|| |||| || | || ||| | || | || || ||||| || || | || |||
Sbjct 65601 CCTCGGATACCATCGACAATGTCAAGTC-GAAGATCCAGGACAAGGAGGGCATCCCCCCA 65543
Query 23725 GATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGAT 23784
|| || ||||| | || ||||||||||| || || || |||| || || | ||
Sbjct 65542 GACCAGCAGCGCCTGATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGTACCCTCTCTGAC 65483
Query 23785 TACAACATACAAAA 23798
|||||||| |||||
Sbjct 65482 TACAACATTCAAAA 65469
>seq177
Length=70791
Score = 84.2 bits (92), Expect = 1e-11
Identities = 136/193 (70%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || ||||||||||| || || ||||| || || || || || |
Sbjct 29615 ATGCAGATCTTCGTGAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC 29556
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || ||| | || | || || ||||| || || | ||||| || ||
Sbjct 29555 GACACCATCGACAATGTCAAGTC-TAAGATCCAGGACAAGGAGGGCATCCCGCCCGACCA 29497
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||||| |||| ||||||||||| || || || || | || ||| | ||| || ||
Sbjct 29496 GCAGCGCCTAATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGGACTCTCTCCGACTATAA 29437
Query 23790 CATACAAAAAGAG 23802
||| || || |||
Sbjct 29436 CATCCAGAAGGAG 29424
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338006287928432
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |