Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09] 804 sequences; 36,704,944 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq32 95.1 8e-15 seq20 91.5 1e-13 seq177 84.2 1e-11 >seq32 Length=147543 Score = 95.1 bits (104), Expect = 8e-15 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| |||||||| || || || || || || |||||||| | || || || ||| || Sbjct 71006 ATGCAAATTTTCGTCAAGACTCTGACTGGCAAGACGATCACGTTGGAGGTGGAGTCCTCG 71065 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | ||| ||| || ||||| || || | ||||| |||||| Sbjct 71066 GACACCATTGACAACGTCAAATCAAAGATCCAGGACAAGGAGGGCATCCCGCCTGATCAA 71125 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | || || || ||||| || |||| |||| || || | ||| |||||| Sbjct 71126 CAGCGTCTCATCTTCGCGGGCAAGCAGTTGGAGGACGGTCGGACCCTGTCCGACTACAAC 71185 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTT 23820 || || || ||| ||| | || || ||| Sbjct 71186 ATCCAGAAGGAGAGCACTCTGCACTTGGTT 71215 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || || ||||| ||||| ||||| || ||||| || || || || Sbjct 71234 ATGCAGATTTTCGTCAAGACGCTCACAGGAAAGACGATTACGCTCGAGGTGGAATCTTCG 71293 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | || || ||| ||||| || || | ||||| ||||| Sbjct 71294 GACACAATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCGCCTGATCAG 71353 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | || || || ||||| || |||| || | || ||| | || ||||| Sbjct 71354 CAGCGTCTCATCTTCGCGGGCAAGCAGTTGGAGGATGGTCGGACTCTGTCTGACTACAAT 71413 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGT 23819 || || || ||| |||| | || || || Sbjct 71414 ATCCAGAAGGAGAGCACACTGCACTTGGT 71442 >seq20 Length=161045 Score = 91.5 bits (100), Expect = 1e-13 Identities = 138/194 (71%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 23606 TTAAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACT 23665 ||| | ||||||| ||||| || ||||||||||| || || ||||| ||||| || || | Sbjct 65661 TTATAGTGCAGATCTTCGTGAAGACCCTCACGGGTAAGACTATCACCCTCGAGGTCGAGT 65602 Query 23666 CCACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCA 23724 || |||| || | || ||| | || | || || ||||| || || | || ||| Sbjct 65601 CCTCGGATACCATCGACAATGTCAAGTC-GAAGATCCAGGACAAGGAGGGCATCCCCCCA 65543 Query 23725 GATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGAT 23784 || || ||||| | || ||||||||||| || || || |||| || || | || Sbjct 65542 GACCAGCAGCGCCTGATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGTACCCTCTCTGAC 65483 Query 23785 TACAACATACAAAA 23798 |||||||| ||||| Sbjct 65482 TACAACATTCAAAA 65469 >seq177 Length=70791 Score = 84.2 bits (92), Expect = 1e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || ||||||||||| || || ||||| || || || || || | Sbjct 29615 ATGCAGATCTTCGTGAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC 29556 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || | || || ||||| || || | ||||| || || Sbjct 29555 GACACCATCGACAATGTCAAGTC-TAAGATCCAGGACAAGGAGGGCATCCCGCCCGACCA 29497 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||| |||| ||||||||||| || || || || | || ||| | ||| || || Sbjct 29496 GCAGCGCCTAATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGGACTCTCTCCGACTATAA 29437 Query 23790 CATACAAAAAGAG 23802 ||| || || ||| Sbjct 29436 CATCCAGAAGGAG 29424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338006287928432