Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09] 804 sequences; 36,704,944 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq32 140 8e-28 seq177 125 2e-23 >seq32 Length=147543 Score = 140 bits (154), Expect = 8e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | ||| |||||| || || |||| ||||| |||| || || | || || Sbjct 71217 AGAACCAAGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGTCCGACCGTCC 71158 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || | |||||| || |||||||| || || ||||| || ||||| || || |||||||| Sbjct 71157 TCCAACTGCTTGCCCGCGAAGATGAGACGCTGTTGATCAGGCGGGATGCCCTCCTTGTCC 71098 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 ||||||||| || || || |||||||| |||| ||||| || |||||||||||| Sbjct 71097 TGGATCTTTGATTTGACGTTGTCAATGGTGTCCGAGGACTCCACCTCCAACGTGATCGTC 71038 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||| ||| || | ||| | |||||| Sbjct 71037 TTGCCAGTCAGAGTCTTGACGAAAATTTGCAT 71006 Score = 127 bits (140), Expect = 5e-24 Identities = 142/190 (75%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| || ||||| || || || || |||| ||||||||| | | || | ||||| Sbjct 70989 AGGACGAGATGGAGCGTCGACTCCTTCTGGATATTGTAATCCGAGAGGGTACGACCATCC 70930 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || ||||| || || || || ||||| ||||||||||| ||||| || Sbjct 70929 TCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCAGGCGGAATACCCTCCTTATCC 70870 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||| ||| |||||||| || || | |||||| || | ||||| ||| Sbjct 70869 TGAATCTTCGACTTGACATTATCGATGGTATCGGACGATTCCACCTCGAGGGTGATGGTC 70810 Query 225682 TTGCCCGTCA 225691 || || |||| Sbjct 70809 TTTCCGGTCA 70800 >seq177 Length=70791 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || ||||||||||| ||| || || |||| || || |||| | ||| | ||||| Sbjct 29404 AGCACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTATAGTCGGAGAGAGTCCGGCCATCC 29463 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || || ||||| || || || ||||||||||| || || |||||||| Sbjct 29464 TCGAGCTGCTTGCCGGCAAAGATTAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCC 29523 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| ||||||||||| | ||||| || | ||||| ||| Sbjct 29524 TGGATCTTAGACTTGACATTGTCGATGGTGTCGCTCGACTCCACCTCAAGGGTGATAGTC 29583 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||||| | || || | ||| | ||||| Sbjct 29584 TTGCCCGTGAGGGTCTTCACGAAGATCTGCAT 29615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192518915437976