Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09] 804 sequences; 36,704,944 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq177 118 2e-21 seq20 89.7 1e-12 >seq177 Length=70791 Score = 118 bits (130), Expect = 2e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| ||||| || || || ||| || |||||||| || |||| | ||| | ||||| Sbjct 29403 GAGCACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTATAGTCGGAGAGAGTCCGGCCATC 29462 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || ||||| ||||| || | ||||||||| | || ||| || ||||| || Sbjct 29463 CTCGAGCTGCTTGCCGGCAAAGATTAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTC 29522 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || || || |||||| | || | | |||| ||| || ||||| || ||||| Sbjct 29523 CTGGATCTTAGACTTGACATTGTCGATGGTGTCGCTCGACTCCACCTCAAGGGTGATAGT 29582 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||||||||| ||||||||||||| |||||| Sbjct 29583 CTTGCCCGTGAGGGTCTTCACGAAGATCTGCAT 29615 >seq20 Length=161045 Score = 89.7 bits (98), Expect = 1e-12 Identities = 132/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATA 151976 ||||| |||||||| || | | || | || || || || || ||||| ||||| Sbjct 65469 TTTTGAATGTTGTAGTCAGAGAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATC 65528 Query 151977 AGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCT 152036 || | ||||||||| | | ||| || ||||| || || || || |||||| | || Sbjct 65529 AGGCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCG 65588 Query 152037 ACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAG 152096 | | | || || ||| || || || || ||||| || |||||||| |||||||||||| Sbjct 65589 ATGGTATCCGAGGACTCGACCTCGAGGGTGATAGTCTTACCCGTGAGGGTCTTCACGAAG 65648 Query 152097 ACCTGCA 152103 | ||||| Sbjct 65649 ATCTGCA 65655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153808914203484