Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09] 804 sequences; 36,704,944 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq32 168 1e-36 seq177 159 7e-34 seq20 152 1e-31 >seq32 Length=147543 Score = 168 bits (186), Expect = 1e-36 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| || || |||| || | ||||| || || |||||||||||||| | Sbjct 71233 ACCACCACGCAGACGGAGAACCAAGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGA 71174 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || || || ||||| | || || || || ||||| | ||| ||||| ||| ||| Sbjct 71173 CAGGGTCCGACCGTCCTCCAACTGCTTGCCCGCGAAGATGAGACGCTGTTGATCAGGCGG 71114 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| |||||||||| ||| ||| | || || |||||||| | || || Sbjct 71113 GATGCCCTCCTTGTCCTGGATCTTTGATTTGACGTTGTCAATGGTGTCCGAGGACTCCAC 71054 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | ||||||||||| || |||| |||||| ||||| || ||||| Sbjct 71053 CTCCAACGTGATCGTCTTGCCAGTCAGAGTCTTGACGAAAATTTGCAT 71006 Score = 158 bits (174), Expect = 3e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || || || |||| || | ||||| || || ||||| |||||||||| Sbjct 71460 CCACCACGGAGACGCAGCACCAAGTGCAGTGTGCTCTCCTTCTGGATATTGTAGTCAGAC 71401 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || || |||||||| | || || || || ||||| | ||| || || ||| ||| Sbjct 71400 AGAGTCCGACCATCCTCCAACTGCTTGCCCGCGAAGATGAGACGCTGCTGATCAGGCGGG 71341 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| || ||||| | || ||| | || || |||||||||| ||| || Sbjct 71340 ATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATTGTGTCCGAAGATTCCACC 71281 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| || |||||||| || || | ||||| ||||| |||||||| Sbjct 71280 TCGAGCGTAATCGTCTTTCCTGTGAGCGTCTTGACGAAAATCTGCAT 71234 Score = 131 bits (144), Expect = 4e-25 Identities = 152/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || ||||| || ||||| | ||| || || ||||| ||||| || | Sbjct 71004 CCACCACGGAGACGAAGGACGAGATGGAGCGTCGACTCCTTCTGGATATTGTAATCCGAG 70945 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || || |||||||| || || || || || || |||| || || |||||| |||| Sbjct 70944 AGGGTACGACCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCAGGCGGA 70885 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 ||||||||||| || || ||||| | || || ||||||| || || || | ||| || Sbjct 70884 ATACCCTCCTTATCCTGAATCTTCGACTTGACATTATCGATGGTATCGGACGATTCCACC 70825 Query 283053 TCGAGAGTGATCGTCTTACCCGTCA 283077 ||||| ||||| ||||| || |||| Sbjct 70824 TCGAGGGTGATGGTCTTTCCGGTCA 70800 >seq177 Length=70791 Score = 159 bits (176), Expect = 7e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||||||| || || || || | ||||| || || |||||||| ||||| | Sbjct 29388 ACCACCACGCAGGCGGAGCACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTATAGTCGGA 29447 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || ||||||||||| || || || ||||||||||| | || || ||||| ||| Sbjct 29448 GAGAGTCCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATTAGGCGCTGCTGGTCGGGCGG 29507 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| |||||||| | || || | ||||| ||||| | || || Sbjct 29508 GATGCCCTCCTTGTCCTGGATCTTAGACTTGACATTGTCGATGGTGTCGCTCGACTCCAC 29567 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| ||||| ||||| | ||||| ||||| |||||||| Sbjct 29568 CTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCAT 29615 >seq20 Length=161045 Score = 152 bits (168), Expect = 1e-31 Identities = 146/187 (78%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 ||||| ||||||||||||| || || ||||| ||||| || || || |||||||||||| Sbjct 65469 TTTTGAATGTTGTAGTCAGAGAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATC 65528 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 | || || ||||| || || ||||||||||| |||||||| | || || | ||| Sbjct 65529 AGGCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCG 65588 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAAT 283091 || || ||||| | ||||| ||||| ||||| ||||||||||| | ||||| ||||| Sbjct 65589 ATGGTATCCGAGGACTCGACCTCGAGGGTGATAGTCTTACCCGTGAGGGTCTTCACGAAG 65648 Query 283092 ATCTGCA 283098 ||||||| Sbjct 65649 ATCTGCA 65655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046728417277816