Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09]
804 sequences; 36,704,944 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq177 149 2e-30
seq32 145 2e-29
seq20 131 4e-25
>seq177
Length=70791
Score = 149 bits (164), Expect = 2e-30
Identities = 159/209 (76%), Gaps = 6/209 (3%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980
|| || |||||||| || ||||| || || || |||||||| |||||||| |||
Sbjct 29612 CAGATCTTCGTGAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC--- 29556
Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040
||||||||||| || ||||| ||||| |||||||| || || ||||| || ||||||
Sbjct 29555 GACACCATCGACAATGTCAAGTCTAAGATCCAGGACAAGGAGGGCATCCCGCCCGACCAG 29496
Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100
|| || || ||||| ||||| || |||||||| ||||| ||||||| |||| ||||||
Sbjct 29495 CAGCGCCTAATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGGACTCTCTCCGACTATAAC 29436
Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGT 178129
|||| || || || || || |||||
Sbjct 29435 ATCCAGAAGGAGAGCACCCTCCACCTTGT 29407
>seq32
Length=147543
Score = 145 bits (160), Expect = 2e-29
Identities = 156/205 (76%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||| || || ||||||||||| ||||| || |||||||||||| || |||
Sbjct 71237 CAGATTTTCGTCAAGACGCTCACAGGAAAGACGATTACGCTCGAGGTGGAATCTTCGGAC 71296
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || |||||||| |||||||||||||| || || ||||| || || |||||
Sbjct 71297 ACAATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCGCCTGATCAGCAG 71356
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || |||||||| || || ||| | || ||||| ||||||| | || || || ||
Sbjct 71357 CGTCTCATCTTCGCGGGCAAGCAGTTGGAGGATGGTCGGACTCTGTCTGACTACAATATC 71416
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || || |||||||| ||||
Sbjct 71417 CAGAAGGAGAGCACACTGCA-CTTG 71440
Score = 138 bits (152), Expect = 3e-27
Identities = 156/208 (75%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| || ||||| || || || |||||||| | |||||||| ||| |||
Sbjct 71009 CAAATTTTCGTCAAGACTCTGACTGGCAAGACGATCACGTTGGAGGTGGAGTCCTCGGAC 71068
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || ||||||||| |||||| |||||||| || || ||||| || || || ||
Sbjct 71069 ACCATTGACAACGTCAAATCAAAGATCCAGGACAAGGAGGGCATCCCGCCTGATCAACAG 71128
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || |||||||| || || ||| | || || || |||| || |||| || ||| ||
Sbjct 71129 CGTCTCATCTTCGCGGGCAAGCAGTTGGAGGACGGTCGGACCCTGTCCGACTACAACATC 71188
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131
|| || || || ||||| |||| ||
Sbjct 71189 CAGAAGGAGAGCACTCTGCA-CTTGGTT 71215
Score = 127 bits (140), Expect = 5e-24
Identities = 139/185 (75%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAA 178004
|| ||||| || |||||||||||||||||| || || |||||||| || |||||
Sbjct 70802 ACCGGAAAGACCATCACCCTCGAGGTGGAATCGTCCGATACCATCGATAATGTCAAGTCG 70861
Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064
||||||||||| || || || || || || |||||||| || || || ||||| || ||
Sbjct 70862 AAGATTCAGGATAAGGAGGGTATTCCGCCTGACCAGCAGCGCCTGATTTTCGCGGGCAAG 70921
Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124
|||||||| ||||| | || || | ||||| || |||| || || || || || |||
Sbjct 70922 CAGCTCGAGGATGGTCGTACCCTCTCGGATTACAATATCCAGAAGGAGTCGACGCTCCAT 70981
Query 178125 CTTGT 178129
|| ||
Sbjct 70982 CTCGT 70986
>seq20
Length=161045
Score = 131 bits (144), Expect = 4e-25
Identities = 140/185 (76%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || |||||||| || ||||| || || || |||||||||||||| || ||| ||
Sbjct 65653 CAGATCTTCGTGAAGACCCTCACGGGTAAGACTATCACCCTCGAGGTCGAGTCCTCGGAT 65594
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || ||||| ||||| |||||||| || || ||||| || ||||||||
Sbjct 65593 ACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCAGCAG 65534
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||| ||||| || |||||||| || || | || || | || || ||| |
Sbjct 65533 CGCCTGATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGTACCCTCTCTGACTACAACATT 65474
Query 178104 CAAAA 178108
|||||
Sbjct 65473 CAAAA 65469
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203718800063976
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |