Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09] 804 sequences; 36,704,944 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq177 170 2e-37 seq32 163 3e-35 seq20 132 4e-26 >seq177 Length=70791 Score = 170 bits (188), Expect = 2e-37 Identities = 177/230 (77%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | ||| || || || |||||||||||||| ||||||||||||||| Sbjct 29389 CCACCACGCAGGCGGAGCACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTATAGTCGGAG 29448 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || | || ||||||||||||||||| || || |||||||| ||||| | || Sbjct 29449 AGAGTCCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATTAGGCGCTGCTGGTCGGGCGGG 29508 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCA 41813 | || |||||||||| ||| || ||| || | || | |||||||||||||||| Sbjct 29509 ATGCCCTCCTTGTCCTGGATCTTAGACTTGACATTGTCG--ATGGTGTCGCTCGACTCCA 29566 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||| | || || || || ||||| || ||||| ||||| ||||||||| Sbjct 29567 CCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCATG 29616 >seq32 Length=147543 Score = 163 bits (180), Expect = 3e-35 Identities = 175/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| ||||| |||||||||||||| ||||| |||||||| Sbjct 71232 CCACCACGCAGACGGAGAACCAAGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAC 71173 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || |||| || | ||||||||| ||||| || || |||||||| || | || Sbjct 71172 AGGGTCCGACCGTCCTCCAACTGCTTGCCCGCGAAGATGAGACGCTGTTGATCAGGCGGG 71113 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| || | |||| || ||| | | | ||||| |||||||| Sbjct 71112 ATGCCCTCCTTGTCC-TGGATCTTTGATTTGACGTTGTCAATGGTGTCCGAGGACTCCAC 71054 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||| ||| ||||| || || ||||| ||||| |||||||| |||||| Sbjct 71053 CTCCAACGTGATCGTCTTGCCAGTCAGAGTCTTGACGAAAATTTGCATG 71005 Score = 136 bits (150), Expect = 4e-27 Identities = 169/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | ||||| ||||| |||||||||||||| || || ||||| || Sbjct 71461 GCCACCACGGAGACGCAGCACCAAGTGCAGTGTGCTCTCCTTCTGGATATTGTAGTCAGA 71402 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || || || | || || | ||||||||| ||||| || || ||||| || || | || Sbjct 71401 CAGAGTCCGACCATCCTCCAACTGCTTGCCCGCGAAGATGAGACGCTGCTGATCAGGCGG 71342 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | || |||||||||| ||| | || | | ||| | | | ||||| || |||| Sbjct 71341 GATGCCCTCCTTGTCC-TGAATCTTGGACTTGACGTTGTCAATTGTGTCCGAAGATTCCA 71283 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| | ||| ||||| || || || |||||||| |||||||||||||| Sbjct 71282 CCTCGAGCGTAATCGTCTTTCCTGTGAGCGTCTTGACGAAAATCTGCAT 71234 Score = 105 bits (116), Expect = 6e-18 Identities = 105/136 (77%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | || ||||| ||||| ||||||||| || || || || || Sbjct 71005 GCCACCACGGAGACGAAGGACGAGATGGAGCGTCGACTCCTTCTGGATATTGTAATCCGA 70946 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||| || | || |||||||||||||| ||||| ||||||||||| ||||| | || Sbjct 70945 GAGGGTACGACCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCAGGCGG 70886 Query 41755 AACGCTCTCCTTGTCC 41770 || | |||||| ||| Sbjct 70885 AATACCCTCCTTATCC 70870 >seq20 Length=161045 Score = 132 bits (146), Expect = 4e-26 Identities = 145/191 (76%), Gaps = 4/191 (2%) Strand=Plus/Plus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 |||| |||||||| ||||| |||||||| || |||| ||||||||||||||||| || | Sbjct 65467 CCTTTTGAATGTTGTAGTCAGAGAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCAAAGA 65526 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGA 41790 |||||||||| ||||| | ||| | || |||||||||| ||| || ||| || | Sbjct 65527 TCAGGCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGT 65586 Query 41791 CGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850 || | || || ||||| ||||| | || || || |||||||| || ||||| || Sbjct 65587 CG--ATGGTATCCGAGGACTCGACCTCGAGGGTGATAGTCTTACCCGTGAGGGTCTTCAC 65644 Query 41851 GAAAATCTGCA 41861 ||| ||||||| Sbjct 65645 GAAGATCTGCA 65655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462299353844800