Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09]
804 sequences; 36,704,944 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq177 170 2e-37
seq32 163 3e-35
seq20 132 4e-26
>seq177
Length=70791
Score = 170 bits (188), Expect = 2e-37
Identities = 177/230 (77%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || | ||| || || || |||||||||||||| |||||||||||||||
Sbjct 29389 CCACCACGCAGGCGGAGCACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTATAGTCGGAG 29448
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| || || | || ||||||||||||||||| || || |||||||| ||||| | ||
Sbjct 29449 AGAGTCCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATTAGGCGCTGCTGGTCGGGCGGG 29508
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCA 41813
| || |||||||||| ||| || ||| || | || | ||||||||||||||||
Sbjct 29509 ATGCCCTCCTTGTCCTGGATCTTAGACTTGACATTGTCG--ATGGTGTCGCTCGACTCCA 29566
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
|||| | || || || || ||||| || ||||| ||||| |||||||||
Sbjct 29567 CCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCATG 29616
>seq32
Length=147543
Score = 163 bits (180), Expect = 3e-35
Identities = 175/229 (76%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | |||| ||||| |||||||||||||| ||||| ||||||||
Sbjct 71232 CCACCACGCAGACGGAGAACCAAGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAC 71173
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
||||| || |||| || | ||||||||| ||||| || || |||||||| || | ||
Sbjct 71172 AGGGTCCGACCGTCCTCCAACTGCTTGCCCGCGAAGATGAGACGCTGTTGATCAGGCGGG 71113
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| || |||||||||| || | |||| || ||| | | | ||||| ||||||||
Sbjct 71112 ATGCCCTCCTTGTCC-TGGATCTTTGATTTGACGTTGTCAATGGTGTCCGAGGACTCCAC 71054
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
||||| ||| ||||| || || ||||| ||||| |||||||| ||||||
Sbjct 71053 CTCCAACGTGATCGTCTTGCCAGTCAGAGTCTTGACGAAAATTTGCATG 71005
Score = 136 bits (150), Expect = 4e-27
Identities = 169/229 (74%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || || ||||| | ||||| ||||| |||||||||||||| || || ||||| ||
Sbjct 71461 GCCACCACGGAGACGCAGCACCAAGTGCAGTGTGCTCTCCTTCTGGATATTGTAGTCAGA 71402
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
|| || || | || || | ||||||||| ||||| || || ||||| || || | ||
Sbjct 71401 CAGAGTCCGACCATCCTCCAACTGCTTGCCCGCGAAGATGAGACGCTGCTGATCAGGCGG 71342
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813
| || |||||||||| ||| | || | | ||| | | | ||||| || ||||
Sbjct 71341 GATGCCCTCCTTGTCC-TGAATCTTGGACTTGACGTTGTCAATTGTGTCCGAAGATTCCA 71283
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||| | ||| ||||| || || || |||||||| ||||||||||||||
Sbjct 71282 CCTCGAGCGTAATCGTCTTTCCTGTGAGCGTCTTGACGAAAATCTGCAT 71234
Score = 105 bits (116), Expect = 6e-18
Identities = 105/136 (77%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || || ||||| | || ||||| ||||| ||||||||| || || || || ||
Sbjct 71005 GCCACCACGGAGACGAAGGACGAGATGGAGCGTCGACTCCTTCTGGATATTGTAATCCGA 70946
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
|||||| || | || |||||||||||||| ||||| ||||||||||| ||||| | ||
Sbjct 70945 GAGGGTACGACCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCAGGCGG 70886
Query 41755 AACGCTCTCCTTGTCC 41770
|| | |||||| |||
Sbjct 70885 AATACCCTCCTTATCC 70870
>seq20
Length=161045
Score = 132 bits (146), Expect = 4e-26
Identities = 145/191 (76%), Gaps = 4/191 (2%)
Strand=Plus/Plus
Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732
|||| |||||||| ||||| |||||||| || |||| ||||||||||||||||| || |
Sbjct 65467 CCTTTTGAATGTTGTAGTCAGAGAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCAAAGA 65526
Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGA 41790
|||||||||| ||||| | ||| | || |||||||||| ||| || ||| || |
Sbjct 65527 TCAGGCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGT 65586
Query 41791 CGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850
|| | || || ||||| ||||| | || || || |||||||| || ||||| ||
Sbjct 65587 CG--ATGGTATCCGAGGACTCGACCTCGAGGGTGATAGTCTTACCCGTGAGGGTCTTCAC 65644
Query 41851 GAAAATCTGCA 41861
||| |||||||
Sbjct 65645 GAAGATCTGCA 65655
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462299353844800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |