Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548795.1_202016-02-04] 2,196 sequences; 42,458,485 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq2102 91.5 2e-13 >seq2102 Length=47513 Score = 91.5 bits (100), Expect = 2e-13 Identities = 191/284 (67%), Gaps = 3/284 (1%) Strand=Plus/Minus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 || || || ||||| || || ||| | |||||||| ||||||||||| ||||| Sbjct 28397 ATGTATGTGTCGATCAGGAGCGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGG 28338 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353 || ||||| ||||| || || || | || || ||||| || ||| || || | ||| Sbjct 28337 AAGCCGTAGAAGCAGCGCGCCTCGGGAATCTGGACTTCGGCGCTGAAGCGCTCAACCAGA 28278 Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATAT 17413 || ||||| |||||||| || |||||||| || || | || ||| ||||| || Sbjct 28277 TTCTCGTTGACGATGCCATCCGAAGCGGCGAAGAAGGCGAGAATGTGCGAGATGAAGTAC 28218 Query 17414 TTTTCGTCCGGTGTAAG---AACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCT 17470 | ||| || || || | |||||| | | ||| || || | ||| | ||| Sbjct 28217 TGTTCATCTTCAGTGAGCTTGTTGTTCCAGTCGTGGAGATCCTTAGACAAATCAATCTCT 28158 Query 17471 TCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCA 17514 || | |||||| || ||| | ||||| || ||||| | ||| Sbjct 28157 TCCGCGGTCCAGAATGAGGCCTCGGCCTTCTTGTACATCTGCCA 28114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517531393373280