Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548795.1_202016-02-04] 2,196 sequences; 42,458,485 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq1560 237 2e-57 >seq1560 Length=61984 Score = 237 bits (262), Expect = 2e-57 Identities = 580/872 (67%), Gaps = 18/872 (2%) Strand=Plus/Plus Query 53981 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 54040 ||||| || || | || ||||||| | ||| || |||| | || || || ||||| Sbjct 7869 CCAGGGCACTCGTTAGGGCACATCAGAGTCCAGTCGCCGTTCTTCTCAACACGCTTCATG 7928 Query 54041 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCT 54100 || |||||||| ||||||||||| | || ||||| | || | | ||||| ||||| Sbjct 7929 AACAGATCAGGGATCCAAAGAGCGAGGAACAGATCGCGGGCACGAATCTCCTCCTTTCCG 7988 Query 54101 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 54160 ||||| | || ||||||||| | | | ||| | |||||||| || | ||| ||| Sbjct 7989 TGGTTCTTCCTCAGGTCGAGGAACTCGAAGACATCTGCGTGCCACGGCTCAAGGTAGATG 8048 Query 54161 GTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 54220 | | | || || || ||||| || ||||| || | ||| | ||| ||||| || | Sbjct 8049 GCAAAGGCACCGGGACGCTTGTTGCCACCCTGGTCGACGTAACGAGCCGTGTTGTTGAAG 8108 Query 54221 ACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCA 54280 || | || ||| |||| ||| ||||| || | || ||||| |||| ||||||| ||| Sbjct 8109 ACACGCAGCATAGGAACAATGCCATTCGAGGTGCCGTTGGTACCGGCGATATAGGAACCA 8168 Query 54281 CTGGCACGAATATTACTAA--TTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATG 54338 ||||||| ||| | | ||| ||||| || || || ||||| || ||||| | | Sbjct 8169 GTGGCACGGATACGATGGACGTTG--AGACCGATACCGCCAGCCATCTTGGAGATCATGG 8226 Query 54339 CGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAA 54398 | || || | ||||||||||||||||| ||||| |||||| |||||| || || | Sbjct 8227 CACAGGTCTTGAGGGTATCATAGATGCCCTCGATACTGTCATCCTTCATGTCAACCAGGA 8286 Query 54399 AACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 54458 | || |||| ||| | || || || || || | || || || ||||| | Sbjct 8287 AGCATGATGACAATTGAGCCTGCGGTGTGCCGGCGTTGAAGAGCGTCGGGGACGCGTGTG 8346 Query 54459 TAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGAT----AGCTGAGTCTATATC-CCA 54513 | || |||| || | || ||||| |||||||| ||| | | | | || || Sbjct 8347 TGAAGAATTTGCTGGACATAAGGTTGTAGGTCTCGATGACACGCTCAATGT-TGTCACCC 8405 Query 54514 TTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTT 54573 | || ||||| || |||||||| | ||||||||| || || ||||| |||||| Sbjct 8406 CAG----ATACCTACAGCAACACGCATGATCATGTGCTGTGGCCTCTCAACAATCTTGCC 8461 Query 54574 GTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAA 54633 ||| | || || | ||| || | || | || || || |||||||| | ||| || Sbjct 8462 GTTGAGCTTGAGAAGGTAAGACCTCTCGAGGGTCTTGAAGCCAAAATATTGGTAGTTGAA 8521 Query 54634 GTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCAT 54693 ||| || || || | |||| |||||| ||| | ||||| | | || || Sbjct 8522 GTCACGATCATAGACAATAGCTGAGTCGAGATCCTCCTTGTGACGCATGACGCAGTCGTA 8581 Query 54694 GGTAATACTTGA--AATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTAAAT 54751 ||| ||||| ||| || ||||| | || || || || || || ||||||| || Sbjct 8582 TGTA--TCTTGAGCAATCATGGGAGAGAGCTTGCCGTTCTTGGGGTTTACATAGTGGAAG 8639 Query 54752 AAATCCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCT 54811 | || | |||||| ||| | || || || | ||||| || ||||| || || Sbjct 8640 AGGTCGCTGATCACTGATGAAAACTGCTTCTTGGTCTGCTTGTGAAGGTTTGAGACTGCG 8699 Query 54812 ATTCTAGCGGCTAGAATGGCATAATCCGGATG 54843 || | || || || ||||| || || ||||| Sbjct 8700 ATACGCGCAGCGAGGATGGCGTAGTCGGGATG 8731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593705302342080