Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548795.1_202016-02-04] 2,196 sequences; 42,458,485 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq2102 172 6e-38 seq1434 127 2e-24 seq2143 111 2e-19 seq577 104 2e-17 >seq2102 Length=47513 Score = 172 bits (190), Expect = 6e-38 Identities = 274/385 (71%), Gaps = 6/385 (2%) Strand=Plus/Plus Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGA-GCGC 117040 |||||||||| ||||| ||| | |||||| | | || ||| | || | | || | |||| Sbjct 28521 AGAAGGCCGACTGGGCTCTGAGGTGGATCACTGACA-AGAAGTCGACATTTGCCACGCGC 28579 Query 117041 CTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTT 117100 || || || ||||| | |||||||||| ||||||| || ||||||| |||| || Sbjct 28580 CTTGTCGCTTTCGCTGTCGTCGAGGGCATCTTCTTCAGCGGTGCTTTCGCCTCCATCTTC 28639 Query 117101 TGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGG 117160 ||||||||||| || ||| | |||||||||||||||||| ||||||||||||||| | Sbjct 28640 TGGCTCAAGAAGCGTGGCTTGATGCCCGGCCTGACTTTCTCAAACGAGCTCATCTCCCGT 28699 Query 117161 GACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCG 117220 ||||| || || || ||||||||||||| | |||||| || || | | || Sbjct 28700 GACGAAGGCCTCCACACCGACTTTGCCTGTCTCCTGTTCTCGCTCCTGAACAACAGGCCC 28759 Query 117221 AGCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTC 117280 ||| || ||| |||||| || |||||| ||| || ||||| ||||| Sbjct 28760 AGCAAGGATATTGTCCAGGAGATTGTTGTCGACGCTGTCAAGATTGAGCAAGAGTTCCTT 28819 Query 117281 ACCGAAGCGCTGCCGGTGCG-TCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACA 117338 || || || |||| |||| || ||||| | || || || | ||| ||| |||| Sbjct 28820 ACAGAGGCTTTGCC-CTGCGCCCTCCTGGGCATGAA-CGCCAACCTTATGAAGCAGTACA 28877 Query 117339 TCGAGTTCGTCGCCGACAGGCTGCT 117363 | ||||| ||||| ||||| || || Sbjct 28878 TTGAGTTTGTCGCTGACAGACTTCT 28902 Score = 167 bits (184), Expect = 2e-36 Identities = 212/286 (74%), Gaps = 7/286 (2%) Strand=Plus/Plus Query 116637 TGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGT 116696 |||||| |||||||| ||||||||||| || |||||||||| || ||| | || ||| Sbjct 28112 TGTGGCAGATGTACAAGAAGGCCGAGGCCTCATTCTGGACCGCGGAAGAGATTGATTTGT 28171 Query 116697 CCAAGGA-CACGAGCGACTGGGAGCGCTTGAAC---GACAACGAGCGCCATTTCATCAAG 116752 | ||||| | | | ||||||| | | | | || | || | | |||||| | Sbjct 28172 CTAAGGATCTCCA-CGACTGGAACAACAAGCTCACTGAAGATGAACAGTACTTCATCTCG 28230 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||| | || ||||| |||||||| || ||||||||||||||||||||||| ||||| Sbjct 28231 CACATTCTCGCCTTCTTCGCCGCTTCGGATGGCATCGTCAACGAGAATCTGGTTGAGCGC 28290 Query 116813 TTC-GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| || | || || ||| | |||||||||| |||||||||||||| |||||| || Sbjct 28291 TTCAGCGC-CGAAGTCCAGATTCCCGAGGCGCGCTGCTTCTACGGCTTCCAGATCATGAT 28349 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917 ||||||| | ||||| || | || ||| ||| |||||||| ||| Sbjct 28350 GGAGAACATCCACTCCGAGACCTACTCGCTCCTGATCGACACATAC 28395 >seq1434 Length=58724 Score = 127 bits (140), Expect = 2e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||||||||| || |||||| | || || || | | | Sbjct 22940 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC 22881 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | | ||||| || || | ||||| ||||| |||||| |||||||| Sbjct 22880 GATACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 22821 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || | |||| || ||||| ||||| || |||| | ||||| |||||||||| Sbjct 22820 CAGCGCTTGATCTTTGCCGGCAAGCAGCTCGAGGACGGCAGGACCCTGTCCGACTACAAC 22761 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||||||||||| ||| || || || ||| |||| Sbjct 22760 ATCCAGAAGGAGAGCACCCTCCACCTCGTGCTGCG 22726 >seq2143 Length=14442 Score = 111 bits (122), Expect = 2e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| |||||||| || || || || | || ||||| || | Sbjct 9692 ATGCAGATTTTCGTCAAAACCCTCACGGGTAAGACGATTACTCTGGAGGTCGAGTCCTCG 9751 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | | ||| || || | ||||| ||||| || ||| ||||||| Sbjct 9752 GACACCATCGACAATGTGAAGTCGAAGATCCAAGACAAGGAGGGTATTCCCCCGGACCAA 9811 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||||| ||||| | ||| ||||| ||||| || |||| || || || |||||||||| Sbjct 9812 CAACGTCTCATTTTCGCTGGCAAGCAGCTTGAGGACGGCCGGACTCTTTCCGACTACAAC 9871 Query 40870 ATCCAGAAGGA 40880 || |||||||| Sbjct 9872 ATTCAGAAGGA 9882 Score = 109 bits (120), Expect = 6e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || || |||||||| || || |||| || ||| | || Sbjct 10148 ATGCAAATCTTCGTCAAGACTCTTACCGGCAAAACAATTACACTCGAGGTTGAATCGTCC 10207 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| |||| || |||| ||||| ||||| || || | ||||| Sbjct 10208 GACACGATCGACAACG-TCAAATCCAAGATTCAAGACAAGGAGGGTATTCCGCCTGACCA 10266 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || || | |||| |||||| || |||||||| || | || || | |||||||| Sbjct 10267 ACAGCGCTTGATCTTCGCGGGTAAGCAGCTGGAGGATGGCCGGACTTTGTCTGACTACAA 10326 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||||||| | || |||||||| ||| | || | | |||||| Sbjct 10327 TATCCAGAAGGAGTCGACTCTGCATCTTGTGCTTCGTCTTCGTGGCGGC 10375 Score = 96.9 bits (106), Expect = 4e-15 Identities = 140/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAG 40770 |||| ||||| ||||||||| |||| || || | | ||| | | | | |||| ||||| Sbjct 9486 TCACTGGCAAGACCATCACCCTCGAGGTGGAGTCTAGCGATACCATCGACAACG-TCAAG 9544 Query 40771 GAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGC 40830 || |||| ||||| |||||||| || | ||||| || || ||||||| || ||| Sbjct 9545 TCGAAGATTCAGGACAAGGAGGGCATTCCTCCCGACCAACAGCGTCTCATCTTTGCCGGC 9604 Query 40831 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTG 40890 || || || || || | || || || |||||||||||| ||||||||| || || Sbjct 9605 AAGCAACTTGAGGATGGCCGGACTCTTTCCGACTACAACATTCAGAAGGAGAGTACTCTC 9664 Query 40891 CATCTAGTGTTGCGC 40905 || || ||| | ||| Sbjct 9665 CACCTCGTGCTCCGC 9679 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | |||||||| |||||||| | || || || | | Sbjct 9920 ATGCAGATCTTCGTCAAGACTTTGACGGGCAAGACCATCACGTTGGAGGTAGAGTCGTCA 9979 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | || || | ||| ||||| || || |||||| | ||||| Sbjct 9980 GACACAATCGACAACGTTAAATCCAAGA-TTCAAGACAAGGAAGGAATCCCCCCAGACCA 10038 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || ||| | || | ||| || || ||| |||| || | |||||| | ||||||||| Sbjct 10039 ACAGCGATTGATTTTCGCTGGAAAGCAGTTGGAGGATGGGCGCACGTTGTCCGACTACAA 10098 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||| || |||||| | |||||||| || || Sbjct 10099 CATTCAAAAGGAGTCTACGCTGCACCTGGT 10128 >seq577 Length=12318 Score = 104 bits (114), Expect = 2e-17 Identities = 132/181 (73%), Gaps = 8/181 (4%) Strand=Plus/Minus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || || || ||||| ||||||||| | || ||||| || | |||| Sbjct 6191 TTCGTGAAGACTCTGACTGGCAAGACCATCACCCTGGAGGTCGAGTCCTCGGACA----- 6137 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | | || ||| || || | ||||| ||||| |||||| | ||||| || || || Sbjct 6136 CGATCG---AAGTCCAAGATCCAGGACAAGGAGGGAATCCCCCCTGACCAACAGCGTCTT 6080 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 |||| ||| ||||| ||||| || |||| ||||| || ||||||||||||||||||| Sbjct 6079 ATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGCACTCTTTCCGACTACAACATCCAGAAG 6020 Query 40879 G 40879 | Sbjct 6019 G 6019 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515205057232960