Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548795.1_202016-02-04] 2,196 sequences; 42,458,485 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq2143 123 2e-23 seq577 91.5 1e-13 seq1560 89.7 4e-13 >seq2143 Length=14442 Score = 123 bits (136), Expect = 2e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| ||| | |||||||| |||||||||||||| ||| || |||||| |||||| Sbjct 10128 ACCAGGTGCAGCGTAGACTCCTTTTGAATGTTGTAGTCGGACAACGTGCGCCCATCCTCC 10069 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 | ||| ||||||||| | || | ||||| || || || || || || ||||||||| | Sbjct 10068 AACTGCTTTCCAGCGAAAATCAATCGCTGTTGGTCTGGGGGGATTCCTTCCTTGTCTTGA 10009 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || |||||| | |||| ||||| | ||| ||||| | || | || ||| Sbjct 10008 ATCTTGGATTTAACGTTGTCGATTGTGTCTGACGACTCTACCTCCAACGTGATGGTCTTG 9949 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742 || |||| ||| || || || ||||||||| || Sbjct 9948 CCCGTCAAAGTCTTGACGAAGATCTGCATGCCT 9916 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | || || || ||||||||||| ||| | ||| || ||||| Sbjct 9900 ACCAAGTGAAGGGTGCTTTCCTTCTGAATGTTGTAGTCGGAAAGAGTCCGGCCGTCCTCA 9841 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || |||||| | |||||||| || || || || || || |||||||||||| Sbjct 9840 AGCTGCTTGCCAGCGAAAATGAGACGTTGTTGGTCCGGGGGAATACCCTCCTTGTCTTGG 9781 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | |||| |||||||| | ||||||||| | || | ||| || Sbjct 9780 ATCTTCGACTTCACATTGTCGATGGTGTCCGAGGACTCGACCTCCAGAGTAATCGTCTTA 9721 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 || || || ||||| || |||||||||||| Sbjct 9720 CCCGTGAGGGTTTTGACGAAAATCTGCATG 9691 Score = 96.9 bits (106), Expect = 3e-15 Identities = 133/186 (72%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||| | ||||| ||| ||| || ||||||||||| ||| | ||| || |||||| Sbjct 9673 CACGAGGTGGAGAGTACTCTCCTTCTGAATGTTGTAGTCGGAAAGAGTCCGGCCATCCTC 9614 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 || || || || || ||||||||||||| || |||||||| |||||||||||||| Sbjct 9613 AAGTTGCTTGCCGGCAAAGATGAGACGCTGTTGGTCGGGAGGAATGCCCTCCTTGTCCTG 9554 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 ||| || || || | |||| ||| || | ||| ||||||| ||| | || || Sbjct 9553 AATCTTCGACTTGACGTTGTCGATGGTATCGCTAGACTCCACCTCGAGGGTGATGGTCTT 9494 Query 118709 GCCGGT 118714 ||| || Sbjct 9493 GCCAGT 9488 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || || || ||||| || || ||| || |||||| ||||| || || Sbjct 10344 GTCGACTCCTTCTGGATATTGTAGTCAGACAAAGTCCGGCCATCCTCCAGCTGCTTACCC 10285 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| |||| | ||||| || || || || || |||||||||||| ||| || ||| Sbjct 10284 GCGAAGATCAAGCGCTGTTGGTCAGGCGGAATACCCTCCTTGTCTTGAATCTTGGATTTG 10225 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| ||||| | || ||||||| || | ||||||||||| ||||| Sbjct 10224 ACGTTGTCGATCGTGTCGGACGATTCAACCTCGAGTGTAATTGTTTTGCCGGTAAGAGTC 10165 Query 118722 TTTACAAAAATCTGCAT 118738 || || || || ||||| Sbjct 10164 TTGACGAAGATTTGCAT 10148 >seq577 Length=12318 Score = 91.5 bits (100), Expect = 1e-13 Identities = 129/180 (72%), Gaps = 10/180 (6%) Strand=Plus/Plus Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610 || || |||||||| ||| | |||||| ||||| ||||| || |||||| |||| Sbjct 6021 TTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATA 6080 Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTGTAATTTTTTGTTTAACCTGTTC 118669 |||||||| || || || || || |||||||||| ||| | | || || ||| Sbjct 6081 AGACGCTGTTGGTCAGGGGGGATTCCCTCCTTGTCCTGGA------TCTTGGAC---TTC 6131 Query 118670 GACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 118729 || ||||||| | ||||||||| | ||| | || ||||| |||||||| || || || Sbjct 6132 GATCGTGTCCGAGGACTCGACCTCCAGGGTGATGGTCTTGCCAGTCAGAGTCTTCACGAA 6191 >seq1560 Length=61984 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/213 (69%), Gaps = 3/213 (1%) Strand=Plus/Plus Query 134121 TTGTTCTTTACGCGTTTCATGAATAGATCGGGAATCCACAGGCCGAGCATTAAATCGCGA 134180 || |||| || || |||||||| ||||| || ||||| || |||| | | |||||| Sbjct 7908 TTCTTCTCAACACGCTTCATGAACAGATCAGGGATCCAAAGAGCGAGGAACAGATCGCGG 7967 Query 134181 GCTTTAGTGTCTTCGGAGCCCATGTTGCGTCTCAAGTTGAGAAACTCATAAATTTCCGGA 134240 || | | || || || ||| |||| || ||| ||||| | | || | Sbjct 7968 GCACGAATCTCCTCCTTTCCGTGGTTCTTCCTCAGGTCGAGGAACTCGAAGACATCTGCG 8027 Query 134241 TGCCACGGCTCGATGTAGGCGGCGAGGGCACCTTTTCGCTTA---CCACCCTGGTCGACG 134297 ||||||||||| | |||| ||| | |||||| ||||| ||||||||||||||| Sbjct 8028 TGCCACGGCTCAAGGTAGATGGCAAAGGCACCGGGACGCTTGTTGCCACCCTGGTCGACG 8087 Query 134298 TGACGCACCATGTTGTTGAAGACTCTCAACATA 134330 | ||| || ||||||||||||| | || |||| Sbjct 8088 TAACGAGCCGTGTTGTTGAAGACACGCAGCATA 8120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433818789071632