Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548795.1_202016-02-04] 2,196 sequences; 42,458,485 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq2143 132 6e-26 seq1434 114 1e-20 >seq2143 Length=14442 Score = 132 bits (146), Expect = 6e-26 Identities = 174/236 (74%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 42950 CTATTGTCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTA 43009 ||| || || || | | ||| | ||| | ||||| || |||||| || |||||||| Sbjct 10381 CTACTGGCCGCCACGAAGACGAAGCACAAGATGCAGAGTCGACTCCTTCTGGATATTGTA 10322 Query 43010 ATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTC 43069 |||| || |||||| | || || ||||||||||| ||||| || | ||||| ||||| Sbjct 10321 GTCAGACAAAGTCCGGCCATCCTCCAGCTGCTTACCCGCGAAGATCAAGCGCTGTTGGTC 10262 Query 43070 GGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCC-ACCGTGTCGCTC 43127 | ||| | | ||||||||| ||| | || | ||||| ||| | | | ||||||| | Sbjct 10261 AGGCGGAATACCCTCCTTGTCT-TGAATCTTGGATTTGA-CGTTGTCGATCGTGTCGGAC 10204 Query 43128 GATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||| || |||| || || |||||||| || || ||||| || ||||||||||| Sbjct 10203 GATTCAACCTCGAGTGTAATTGTTTTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 10148 Score = 102 bits (112), Expect = 9e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||||||||| ||||| || | || || ||| | || || | |||||| |||||||| Sbjct 10111 CTCCTTTTGAATGTTGTAGTCGGACAACGTGCGCCCATCCTCCAACTGCTTTCCAGCGAA 10052 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || | |||||| ||||| | || | | ||||||| | ||| | || | || | ||| Sbjct 10051 AATCAATCGCTGTTGGTCTGGGGGGATTCCTTCCTTGT-CTTGAATCTTGGATTTAACGT 9993 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | ||||| ||| || || || | ||||||||| |||||||| | ||||| | Sbjct 9992 TGTCGATTGTGTCTGACGACTCTACCTCCAACGTGATGGTCTTGCCCGTCAAAGTCTTGA 9933 Query 43171 CAAAGATTTGCAT 43183 | ||||| ||||| Sbjct 9932 CGAAGATCTGCAT 9920 >seq1434 Length=58724 Score = 114 bits (126), Expect = 1e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||||| ||| | || | ||||||||||| || || ||||| || | ||| |||| | Sbjct 22725 ACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGTCCTGCC 22784 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 ||| || |||||||| || || || || | ||||||||||| | || | | |||||| Sbjct 22785 GTCCTCGAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGGATACCCTCCTT 22844 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147 |||| ||| || |||| | | | || |||||||| ||||| || | ||||| Sbjct 22845 GTCCTGGATCTTGGACTTGACATTGTCGATGGTATCGCTCGACTCCACCTCAAGGGTGAT 22904 Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || |||||||| || ||||| || ||||| ||||| Sbjct 22905 AGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 22940 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571801903606880