Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548795.1_202016-02-04] 2,196 sequences; 42,458,485 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq1560 378 6e-100 seq2143 104 2e-17 seq2102 100 3e-16 >seq1560 Length=61984 Score = 378 bits (418), Expect = 6e-100 Identities = 1215/1872 (65%), Gaps = 36/1872 (2%) Strand=Plus/Plus Query 22105 CTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCC 22164 || ||| || |||||||| || | | ||||| | | || || || || ||||| || Sbjct 6677 CTGGTCGACAGTAAACTGAATCGGTTGCGCGGCTGCCTGCGTTCGCAGGTAGTACATACC 6736 Query 22165 CGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGG 22224 ||||| ||||| | |||||| | || || ||||| || | || || | || Sbjct 6737 GGTCTTGAGACCAAGCTTCCAGCCTGTGAAGTGCATCGAGGTGATCTTGCCCATGGTTGG 6796 Query 22225 CAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGC 22284 | ||||| | |||| |||||| |||||| || || || || || || || || Sbjct 6797 GTCGCGCATGTGGATGTTGAGCGACTGGGACTGATCAATGAAGGCACCACGGTCAGCAGC 6856 Query 22285 CATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCTC 22344 ||| | | | |||||| ||| || ||||| || |||||||| || | | || | || Sbjct 6857 CATCTGAACGACGGTACGCTGCGATATCTCCCACACAGTCTTGTAGAGCTTCTTGGTATC 6916 Query 22345 TAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAAT 22404 || || | || |||| | ||| || | | ||||| || || || Sbjct 6917 CTCAGGGATGCTGGCAATGTTCTGAATGGAGCCTCCCTCGGCGATGATGCGGTTCTTCAT 6976 Query 22405 CGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTTG 22464 ||| ||||||||| | || |||||| |||| || | |||| || || || Sbjct 6977 GTCATCCGACCACAAACCAAGCTCGACCAAATCCTTGAGCAACCAAGGGTTGACAACCTG 7036 Query 22465 AAACTCGCCGGACAAG-ACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATT 22523 |||||||||| |||| || || || ||||| |||||||| ||| | || ||||| | | Sbjct 7037 GAACTCGCCGG-CAAGCACACGACGCTGGTAGATGTTGGAAGTGTAGGGCTCGAAGCACT 7095 Query 22524 CATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAG- 22582 ||||||| || || || || | ||| ||| |||||||| || || |||| ||| || Sbjct 7096 CATTGTTGCCAAGGATTTGTGAGGTGCTAGCTGTCGGCATGGGGGC-AACA--AGCAAGC 7152 Query 22583 --TTTCTCAAGCCGTGCT--TTGAAATTTTACTCTTGAG--CATCGACCAGTCCCACAGA 22636 || | | || || | |||| | || |||||| | || ||||||||| || Sbjct 7153 TGTTGCGGACACCATGTTCCTTGA--TGTTGGCCTTGAGGGCGTC--CCAGTCCCAGAGG 7208 Query 22637 TCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTG 22696 ||||| ||| | || || |||||| ||||| || | | ||| | | || | Sbjct 7209 TCGGAGGGCTTGACGTT---CCACATGTCGTACTGGAGAATGCCCTGTGAAACAGGAGAG 7265 Query 22697 CCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCG 22756 |||||||| || ||| ||| | | || || | ||| || ||| || Sbjct 7266 CCTTCGTATGTCGAGTAGACACCCTGCTCCTGTGCCAGCTTGCAAGAGGCAGTCAAGGCA 7325 Query 22757 CCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGC----GGCGACGCTTTC 22812 ||| || || ||||| ||||| |||||||||| || ||| || ||| || Sbjct 7326 GCGTGGTAAATGGTCTCAAAGATCTTCTTGTTCAGCTCACGGGCCTCAGGAGAC----TC 7381 Query 22813 GTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGG 22872 | | |||| ||| | | ||| || || |||| |||||| || || | |||||| || Sbjct 7382 GAAAGGCAGACGGAGAGCGAGGAAAGCATCAGCCAGACCCTGTACACCCAGACCGATAGG 7441 Query 22873 TCGGTTTTTCAGATTCGACACTTT--TGCCTCGGGCAAAGGATACCAATTCGAATCGATT 22930 | || || || | || |||||| | | || || | || ||||| Sbjct 7442 CCTGTGGCGCATGTTG--CTGTTACGTGCCTCCTGGACGGGGTAGAAGTTAACGTCGATG 7499 Query 22931 GTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAA 22990 | |||| | ||| | || | || || | ||||||||||| Sbjct 7500 ATCTTGTTGAGGTTACGAACAACGACTTGAGTGACCTCGTGGAGTTTCTCAAAGTCGTAG 7559 Query 22991 ACGCCCGATTG-TA--CAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCC 23047 ||||| || || | ||||||| | ||| | || ||||| ||||||||||| Sbjct 7560 TCGCCCTTGTGGTAGTCGACAAACTGAGGCAGGGCCAGAGAAGCAAGGTTGCATACGGCA 7619 Query 23048 ACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTG 23107 |||||||| || | |||||| | || || || || || ||| | || || Sbjct 7620 ACCTCGTCAGGGGCAGAGTACTCCATGATCTCTGTGCAAAGGTTGGAGCTGCGGATAGTA 7679 Query 23108 CCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTG 23167 |||| || |||||||||| || || ||||| |||||||| | |||| |||| || Sbjct 7680 CCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAACATGAACGGGTTG 7739 Query 23168 CCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGC 23227 || |||||| ||| | ||| | || | ||| | |||| || | | | ||| Sbjct 7740 CCAGTCTCGGTCTGAGCCTCCAGAATGGAATACCAGAGCTTCTGGGCCTTGATA-GTCTT 7798 Query 23228 ACGTACCT-GCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACA 23286 || ||| ||| | | ||||||||| | ||||| || || || || ||||||| || Sbjct 7799 GCGACCCTTGCCGGCCTGCTCGTACTTCTCGTACAGAGCCTCGAACTCATCACCGTAGCA 7858 Query 23287 GTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAAC 23346 ||| || ||||| || | | | || ||||| ||| |||| || || ||||| Sbjct 7859 GTCCGCGAGGCCAGGGCACTCGTTAGGGCACATCAGAGTCCAGTCGCCGTTCTTCTCAAC 7918 Query 23347 GCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTC 23406 || |||| || ||||| || ||||| |||||| |||||| |||||||| || | ||| Sbjct 7919 ACGCTTCATGAACAGATCAGGGATCCAAAGAGCGAGGAACAGATCGCGGGCACGAATCTC 7978 Query 23407 CTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTC 23466 ||| || ||| |||||| ||| || | || || || || || || ||||||||||| Sbjct 7979 CTCCTTTCCGTGGTTCTTCCTCAGGTCGAGGAACTCGAAGACATCTGCGTGCCACGGCTC 8038 Query 23467 GAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGT 23526 ||||| | |||||| || || || | ||| ||||| ||||| ||||||||||| ||||| Sbjct 8039 AAGGTAGATGGCAAAGGCACCGGGACGCTTGTTGCCACCCTGGTCGACGTAACGAGCCGT 8098 Query 23527 GTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCAC 23586 ||||||| | || | ||||| || || | || || || | |||| || || | Sbjct 8099 GTTGTTGAAGACACGCAGCATAGGAACAATGCCATTCGAGGTGCCGTTGGTACCGGCGAT 8158 Query 23587 ACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGA 23646 | ||||| | || || | || |||| || ||| || || || || || || Sbjct 8159 ATAGGAACCAGTGGCACGGATACGATGGACGTTGAGACCGATACCGCCAGCCATCTTGGA 8218 Query 23647 TATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGC 23706 ||||| || || || || || || |||||||||||||| ||||| || || | | Sbjct 8219 GATCATGGCACAGGTCTTGAGGGTATCATAGATGCCCTCGATACTGTCATCCTTCATGTC 8278 Query 23707 GACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCT 23766 |||| ||| || || |||| ||| || | || || |||| ||| || |||||| Sbjct 8279 AACCAGGAAGCATGATGACAATTGAGCCTGCGGTGTGCCGGCGTTGAAGAGCGTCGGGGA 8338 Query 23767 GGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTC 23826 ||||| || ||| || | ||||| || ||||| || |||||| | ||||||| Sbjct 8339 CGCGTGTGTGAAGAATTTGCTGGACATAAGGTTGTAGGTCTCGATGACACGCTCAATGTT 8398 Query 23827 CTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGAC 23886 || || ||||| | || || ||||| ||||||| || || ||||| || | Sbjct 8399 GTCACCCCAGATACCTACAGCAACACGCATGATCATGTGCTGTGGCCTCTCAACAATCTT 8458 Query 23887 GCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTT 23946 |||||| | |||| || || || | | | || || || |||||||| | ||||| Sbjct 8459 GCCGTTGAGCTTGAGAAGGTAAGACCTCTCGAGGGTCTTGAAGCCAAAATATTGGTAGTT 8518 Query 23947 AAAGTCACGATC 23958 ||||||||||| Sbjct 8519 GAAGTCACGATC 8530 >seq2143 Length=14442 Score = 104 bits (114), Expect = 2e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| |||||| |||| ||||| || ||||| | || || || |||| Sbjct 9919 CATGCAGATCTTCGTCAAGACTTTGACGGGCAAGACCATCACGTTGGAGGTAGAGTCGTC 9978 Query 31252 CGACAGTGTCGA-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310 |||| |||| |||| | || | ||| | | |||||||||| | || || |||| Sbjct 9979 AGACACAATCGACAACGTTAAATCCAAGATTCAAG-ACAAGGAAGGAATCCCCCCAGACC 10037 Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATA 31370 | ||||| | || |||||||| || |||||||| || || || ||| || | Sbjct 10038 AACAGCGATTGATTTTCGCTGGAAAGCAGTTGGAGGATGGGCGCACGTTGTCCGACTACA 10097 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||||||||| || || || || || ||||| || | ||| | || |||| Sbjct 10098 ACATTCAAAAGGAGTCTACGCTGCACCTGGTCCTCCGTCTGCGTGGAGGTA 10148 >seq2102 Length=47513 Score = 100 bits (110), Expect = 3e-16 Identities = 296/452 (65%), Gaps = 6/452 (1%) Strand=Plus/Plus Query 57979 TCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTT-GCGGCAATATTTTGG 58037 |||| ||||| | |||||| || || ||||| || ||||| || | || || ||| Sbjct 28584 TCGCTTTCGCTGTCGTCGAGGGCATCTTCTTCAGCGGT-GCTTTCGCCTCCATCTTCTGG 28642 Query 58038 ATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGAC 58097 | ||||| || ||| |||||||||||||||| || |||||| | || || || ||| Sbjct 28643 CTCAAGAAGCGTGGCTTGATGCCCGGCCTGACTTTCTCAAACGAGCTCATCTCCCGTGAC 28702 Query 58098 GAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACG 58157 || || ||||| || || ||||| || || ||| ||| | | | ||| | || | Sbjct 28703 GAAGGCCTCCACACCGACTTTGCCTGTCTCCTGTTCTCGCTCCTGAACAACAGGCCCAGC 28762 Query 58158 CGGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACC 58217 |||| || ||| ||| | ||| || ||| ||| || | ||||| | || Sbjct 28763 AAGGATATTGTCCAGGAGATTGTTGTCGACGCTGTCAAGATTGAGCAAGAGTTCCTTACA 28822 Query 58218 GAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAG 58277 || || | || ||| | || || |||||| | | ||| ||||||||||| Sbjct 28823 GAGGCTTTGCCCTGCGCCCTCCTGGGCATGAACGCCAACCTTATGAAGCAGTACATTGAG 28882 Query 58278 TTTGTTGCCGACAGACTTTTGCTCGAACT--GATTGGAGAGCGTCATTACAACACGAAAA 58335 ||||| || ||||||||| | ||| || || |||| ||| ||| | | | | Sbjct 28883 TTTGTCGCTGACAGACTTCTTGTCGCCCTCGGAAACGAGAAGGTC--TACCGCTCCACCA 28940 Query 58336 ATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGaaaaaa 58395 | || || || || ||| | || || || | |||||||| ||||| ||||| || Sbjct 28941 ACCCATTCGACTTCATGGAGAACATTTCACTGGGTGGCAAGACCAACTTCTTCGAGAAGC 29000 Query 58396 aaGTTAGCGAATATCAAAAATACGGCGTGATG 58427 || |||| || ||||| ||| || ||| Sbjct 29001 GTGTAGGCGAGTACCAAAAGGCCGGTGTCATG 29032 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445754163712320