Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548795.1_202016-02-04] 2,196 sequences; 42,458,485 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq1560 237 2e-57 >seq1560 Length=61984 Score = 237 bits (262), Expect = 2e-57 Identities = 581/872 (67%), Gaps = 18/872 (2%) Strand=Plus/Plus Query 79891 CCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATA 79950 ||||| || |||| ||| ||||||| | ||| || || | | || || || ||||| Sbjct 7869 CCAGGGCACTCGTTAGGGCACATCAGAGTCCAGTCGCCGTTCTTCTCAACACGCTTCATG 7928 Query 79951 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCT 80010 || |||||||| ||||||||||| | || ||||| | || | | |||||| ||||| Sbjct 7929 AACAGATCAGGGATCCAAAGAGCGAGGAACAGATCGCGGGCACGAATCTCCTCCTTTCCG 7988 Query 80011 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 80070 ||||| | || ||||||||| | | | ||| | |||||||| || | ||| ||| Sbjct 7989 TGGTTCTTCCTCAGGTCGAGGAACTCGAAGACATCTGCGTGCCACGGCTCAAGGTAGATG 8048 Query 80071 GCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 80130 || | | || || || ||||| || ||||| || | ||| | ||| ||||| || | Sbjct 8049 GCAAAGGCACCGGGACGCTTGTTGCCACCCTGGTCGACGTAACGAGCCGTGTTGTTGAAG 8108 Query 80131 ACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCA 80190 || | || ||| |||| ||| ||||| || || || ||||| |||| ||||||| ||| Sbjct 8109 ACACGCAGCATAGGAACAATGCCATTCGAGGTGCCGTTGGTACCGGCGATATAGGAACCA 8168 Query 80191 CTGGCACGAATATTACTAA--TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 80248 ||||||| ||| | | ||| ||||| || || || ||||| || ||||| | | Sbjct 8169 GTGGCACGGATACGATGGACGTTG--AGACCGATACCGCCAGCCATCTTGGAGATCATGG 8226 Query 80249 CGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAA 80308 | || || | ||||||||||||||||| || || ||||| |||||| || || | Sbjct 8227 CACAGGTCTTGAGGGTATCATAGATGCCCTCGATACTGTCATCCTTCATGTCAACCAGGA 8286 Query 80309 AACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 80368 | || |||| ||| | || || || || || | || || || ||||| | Sbjct 8287 AGCATGATGACAATTGAGCCTGCGGTGTGCCGGCGTTGAAGAGCGTCGGGGACGCGTGTG 8346 Query 80369 TAAACCATTTTTCAGACAGTAGATTGTACGTCTCAAT----AGCTGATTCTATATC-CCA 80423 | || |||| |||| || ||||| ||||| || ||| | | | | || || Sbjct 8347 TGAAGAATTTGCTGGACATAAGGTTGTAGGTCTCGATGACACGCTCAATGT-TGTCACCC 8405 Query 80424 TTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTT 80483 | || ||||| || |||||||| | ||||||||| || || ||||| |||||| Sbjct 8406 CAG----ATACCTACAGCAACACGCATGATCATGTGCTGTGGCCTCTCAACAATCTTGCC 8461 Query 80484 ATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAA 80543 || | || | | |||||| | || | || || || |||||||| | ||| || Sbjct 8462 GTTGAGCTTGAGAAGGTAAGACCTCTCGAGGGTCTTGAAGCCAAAATATTGGTAGTTGAA 8521 Query 80544 GTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCAT 80603 ||| || || || | |||| | |||| ||| | ||||| | | || || | | Sbjct 8522 GTCACGATCATAGACAATAGCTGAGTCGAGATCCTCCTTGTGACGCATGAC-GCAGTCGT 8580 Query 80604 GGTGATACTTGA--AATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAAT 80661 || ||||| ||| || ||||| | || || || || || || ||||||| ||| Sbjct 8581 -ATGTATCTTGAGCAATCATGGGAGAGAGCTTGCCGTTCTTGGGGTTTACATAGTGGAAG 8639 Query 80662 AAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCT 80721 | || |||||| ||| | || || || | |||||| || ||||| || || Sbjct 8640 AGGTCGCTGATCACTGATGAAAACTGCTTCTTGGTCTGCTTGTGAAGGTTTGAGACTGCG 8699 Query 80722 ATTCTGGCGGCTAAAATGGCATAATCTGGATG 80753 || | || || | ||||| || || ||||| Sbjct 8700 ATACGCGCAGCGAGGATGGCGTAGTCGGGATG 8731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718249083521440