Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548795.1_202016-02-04] 2,196 sequences; 42,458,485 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq2102 141 1e-28 seq1560 113 7e-20 >seq2102 Length=47513 Score = 141 bits (156), Expect = 1e-28 Identities = 206/286 (72%), Gaps = 4/286 (1%) Strand=Plus/Plus Query 125022 TGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCC 125081 ||| | |||||||| ||||| ||||||| || ||||| | |||||| | ||| |||| Sbjct 28114 TGGCAGATGTACAAGAAGGCCGAGGCCTCATTCTGGACCGCGGAAGAGATTGATTTGTCT 28173 Query 125082 AAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCGCAC 125141 ||||| || |||| ||| | | | |||||| ||| | | || || |||||| Sbjct 28174 AAGGATCTCCACGACTGGAACAACAAGCTCACTGAAGATGAACAGTACTTCATCTCGCAC 28233 Query 125142 ATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACGATT 125200 ||| | |||||||| |||| || ||||| ||||||||||| ||||| ||||| || || Sbjct 28234 ATTCTCGCCTTCTTCGCCGCTTCGGATGGCATCGTCAACGAGAATCTGGTTGA-GCGCTT 28292 Query 125201 C-TCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATTG 125259 | | | ||| | ||||| |||| | ||||| ||||| ||||| |||||||| | Sbjct 28293 CAGCGCCGAAGTCCA-GATTCCCGAGGCGCGCTGCTTCTACGGCTTCCAGATCATGATGG 28351 Query 125260 AGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACAT 125305 ||||| | ||||| || | ||||| ||||| |||| ||||| Sbjct 28352 AGAACATCCACTCCGAGACCTACTCGCTCCTGATCGACACATACAT 28397 Score = 131 bits (144), Expect = 2e-25 Identities = 348/529 (66%), Gaps = 17/529 (3%) Strand=Plus/Plus Query 125361 ATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCC 125420 || || || ||||| | |||| | |||||||| |||| | ||||| | | ||| Sbjct 28514 ATCCGCAAGAAGGCCGACTGGGCTCTGAGGTGGATCACTGACAAGAAGTCGACATTTGCC 28573 Query 125421 GACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCC 125480 | || || || ||||| | ||| |||||||||||||| ||| ||| || || Sbjct 28574 ACGCGCCTTGTCGCTTTCGCTGTCGTCGAGGGCATCTTCTTCAGCGGTGCTTTCGCCTCC 28633 Query 125481 ATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATA 125540 ||||| |||||||||||||| || | |||||||| ||||| | |||||| | || Sbjct 28634 ATCTTCTGGCTCAAGAAGCGTGGCTTGATGCCCGGCCTGACTTTCTCAAACGAGCTCATC 28693 Query 125541 TCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACTATCTGCG 125599 || || ||||| ||||| ||| ||||||||| ||| ||||| |||| Sbjct 28694 TCCCGTGACGAAGGCCTCCACACCGACTTTGCCTGTCTCCTGTTCTCGC----------- 28742 Query 125600 TCCCG-AGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGA 125658 ||| | | ||| ||||| | || | ||| | ||||| ||| || || | || Sbjct 28743 TCCTGAACAACAGGCCCAGCAAGGATATTGTCCAGGAGATTGTTGTCGACGCTGTCAAGA 28802 Query 125659 TAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGC 125718 | || |||||||| || || || | | || | | | | ||||||||| ||| | Sbjct 28803 TTGAGCAAGAGTTCCTTACAGAGGCTTTGCCCTGCGCCCTCCTGGGCATGAACGCCAACC 28862 Query 125719 TAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCA 125778 | ||| ||||||| |||||||| || || | || || || | | | Sbjct 28863 TTATGAAGCAGTACATTGAGTTTGTCGCTGACAGACTTCTTGTCGCCCTCGGAAACGAGA 28922 Query 125779 AGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGA 125838 || | ||| | ||| || || || || |||||| | ||| ||||| | || |||| Sbjct 28923 AGGTCTACCGCTCCACCAACCCATTCGACTTCATGGAGAACATTTCACTGGGTGGCAAGA 28982 Query 125839 CCAACTTTTTCGAGAAGAAGGTCAGCGAGTAC--AAACGCTACGGTGTC 125885 ||||||| ||||||||| || |||||||| ||| || ||||||| Sbjct 28983 CCAACTTCTTCGAGAAGCGTGTAGGCGAGTACCAAAAGGC--CGGTGTC 29029 >seq1560 Length=61984 Score = 113 bits (124), Expect = 7e-20 Identities = 346/530 (65%), Gaps = 4/530 (1%) Strand=Plus/Minus Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATGCAATGTCACGA 96866 || ||||||| | | | |||| | || || ||||| | | | ||| | | | || Sbjct 8149 ACCAACGGCACCTCGAATGGCATTGTTCCTATGCTGCGTGTCTTCAACAACACGGCTCGT 8090 Query 96867 TACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGG 96926 ||||| ||||| ||||| || || || || || | ||| ||||| | || || ||| Sbjct 8089 TACGTCGACCAGGGTGGCAACAAGCGTCCCGGTGCCTTTGCCATCTACCTTGAGCCGTGG 8030 Query 96927 CACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGA 96986 ||||| || || || || || |||| || | || ||| || || ||| || Sbjct 8029 CACGCAGATGTCTTCGAGTTCCTCGACCTGAGGAAGAACCACGGAAAGGAGGAGATTCGT 7970 Query 96987 GCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGAC 97046 ||| | || |||| || || ||| | || ||| ||||||||||||| || | | Sbjct 7969 GCCCGCGATCTGTTCCTCGCTCTTTGGATCCCTGATCTGTTCATGAAGCGTGTTGAGAAG 7910 Query 97047 GGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGC 97106 ||| |||||| || |||||||| || || || || || | || |||| || Sbjct 7909 AACGGCGACTGGACTCTGATGTGCCCTAACGAGTGCCCTGGCCTCGCGGACTGCTACGGT 7850 Query 97107 GAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGC-CGATACGTGAGACGAGT 97165 || ||||| ||||| |||| | |||||||| | ||| | || |||| | | Sbjct 7849 GATGAGTTCGAGGCTCTGTACGAGAAGTACGAGCAGGCCGGCAAGGGTCGCAAGACTA-T 7791 Query 97166 CGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGT 97224 | | || | |||| || ||| | |||| || ||||||| |||||||| | |||| Sbjct 7790 CAAGGC-CCAGAAGCTCTGGTATTCCATTCTGGAGGCTCAGACCGAGACTGGCAACCCGT 7732 Query 97225 ACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCA 97284 ||| | |||||||| | || ||||| |||||||| || |||| || ||| Sbjct 7731 TCATGTTGTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAACCTGGGTACTATCC 7672 Query 97285 AGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAG 97334 ||||||| || ||||| || || | |||||| | | || |||||| Sbjct 7671 GCAGCTCCAACCTTTGCACAGAGATCATGGAGTACTCTGCCCCTGACGAG 7622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741038857924960