Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548795.1_202016-02-04]
2,196 sequences; 42,458,485 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq2143 104 2e-17
>seq2143
Length=14442
Score = 104 bits (114), Expect = 2e-17
Identities = 165/237 (70%), Gaps = 0/237 (0%)
Strand=Plus/Minus
Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832
||| || ||||| | || || | |||| ||||| ||||| |||||||| | ||| |
Sbjct 10154 TTTGCATACCTCCACGCAGACGGAGGACCAGGTGCAGCGTAGACTCCTTTTGAATGTTGT 10095
Query 94833 AATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGAT 94892
| ||| || ||| |||||||| ||| ||||| | || || |||| || || |
Sbjct 10094 AGTCGGACAACGTGCGCCCATCCTCCAACTGCTTTCCAGCGAAAATCAATCGCTGTTGGT 10035
Query 94893 CTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGT 94952
|||| || || ||||| ||||| | ||| || | || ||| | ||| ||||| |
Sbjct 10034 CTGGGGGGATTCCTTCCTTGTCTTGAATCTTGGATTTAACGTTGTCGATTGTGTCTGACG 9975
Query 94953 GGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009
|| || || | ||||||||| || || || | ||| || || |||||||||||||
Sbjct 9974 ACTCTACCTCCAACGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCATGC 9918
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/208 (69%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 94801 CAAG-TGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCA 94859
|||| |||| ||| || ||||| || | || || || || ||| | ||||||||
Sbjct 10355 CAAGATGCAGAGTCGACTCCTTCTGGATATTGTAGTCAGACAAAGTCCGGCCATCCTCCA 10296
Query 94860 GCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAA 94919
|||| || || | ||||| || | || || || || |||||||| || ||||| | ||
Sbjct 10295 GCTGCTTACCCGCGAAGATCAAGCGCTGTTGGTCAGGCGGAATACCCTCCTTGTCTTGAA 10236
Query 94920 TTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTC 94979
| || | |||||| | ||| ||||| | || || || | || || ||||| |
Sbjct 10235 TCTTGGATTTGACGTTGTCGATCGTGTCGGACGATTCAACCTCGAGTGTAATTGTTTTGC 10176
Query 94980 CAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| |||||||| || || ||||| |||||
Sbjct 10175 CGGTAAGAGTCTTGACGAAGATTTGCAT 10148
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448278894406560
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |