Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548795.1_202016-02-04] 2,196 sequences; 42,458,485 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq1560 214 2e-50 >seq1560 Length=61984 Score = 214 bits (236), Expect = 2e-50 Identities = 576/872 (66%), Gaps = 18/872 (2%) Strand=Plus/Plus Query 63168 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 63227 ||||| || || | || ||||||| | ||| || |||| | || || || ||||| Sbjct 7869 CCAGGGCACTCGTTAGGGCACATCAGAGTCCAGTCGCCGTTCTTCTCAACACGCTTCATG 7928 Query 63228 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCT 63287 || |||||||| ||||||||||| | || ||||| | || | | ||||| ||||| Sbjct 7929 AACAGATCAGGGATCCAAAGAGCGAGGAACAGATCGCGGGCACGAATCTCCTCCTTTCCG 7988 Query 63288 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 63347 ||||| | || ||||||||| | | | ||| | |||||||| || | ||| ||| Sbjct 7989 TGGTTCTTCCTCAGGTCGAGGAACTCGAAGACATCTGCGTGCCACGGCTCAAGGTAGATG 8048 Query 63348 GCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 63407 || | | || || || ||||| || ||||| || | ||| | ||| ||||| || | Sbjct 8049 GCAAAGGCACCGGGACGCTTGTTGCCACCCTGGTCGACGTAACGAGCCGTGTTGTTGAAG 8108 Query 63408 ACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCA 63467 || | || ||| |||| ||| || || || | || |||||||||| ||||||| ||| Sbjct 8109 ACACGCAGCATAGGAACAATGCCATTCGAGGTGCCGTTGGTACCGGCGATATAGGAACCA 8168 Query 63468 CTGGCACGAATATTACTAA--TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 63525 ||||||| ||| | | ||| ||||| || || || ||||| || ||||| | | Sbjct 8169 GTGGCACGGATACGATGGACGTTG--AGACCGATACCGCCAGCCATCTTGGAGATCATGG 8226 Query 63526 CGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAA 63585 | || || | || |||||||| ||||| || || ||||| |||||| || || | Sbjct 8227 CACAGGTCTTGAGGGTATCATAGATGCCCTCGATACTGTCATCCTTCATGTCAACCAGGA 8286 Query 63586 AACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 63645 | || |||| ||| | || || || || || | || || || ||||| | Sbjct 8287 AGCATGATGACAATTGAGCCTGCGGTGTGCCGGCGTTGAAGAGCGTCGGGGACGCGTGTG 8346 Query 63646 TAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAAT----AGCTGAGTCTATATC-CCA 63700 | || |||| || | || ||||| ||||| || ||| | | | | || || Sbjct 8347 TGAAGAATTTGCTGGACATAAGGTTGTAGGTCTCGATGACACGCTCAATGT-TGTCACCC 8405 Query 63701 TTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTT 63760 | || ||||| || |||||||| | ||||||||| || || ||||| |||||| Sbjct 8406 CAG----ATACCTACAGCAACACGCATGATCATGTGCTGTGGCCTCTCAACAATCTTGCC 8461 Query 63761 GTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAA 63820 ||| | || | | ||| || | || | || || || |||||||| | ||| || Sbjct 8462 GTTGAGCTTGAGAAGGTAAGACCTCTCGAGGGTCTTGAAGCCAAAATATTGGTAGTTGAA 8521 Query 63821 GTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTATATCCAT 63880 ||| || || || | |||| | |||| ||| | ||||| | | || || Sbjct 8522 GTCACGATCATAGACAATAGCTGAGTCGAGATCCTCCTTGTGACGCATGACGCAGTCGTA 8581 Query 63881 GGTGATACTTGA--AATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAAT 63938 || || ||||| ||| || ||||| | || || || || || || ||||||| ||| Sbjct 8582 TGT-AT-CTTGAGCAATCATGGGAGAGAGCTTGCCGTTCTTGGGGTTTACATAGTGGAAG 8639 Query 63939 AAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCT 63998 | || |||||| ||| | || || || | |||||| || ||||| || || Sbjct 8640 AGGTCGCTGATCACTGATGAAAACTGCTTCTTGGTCTGCTTGTGAAGGTTTGAGACTGCG 8699 Query 63999 ATTCTGGCGGCTAGAATGGCATAATCCGGATG 64030 || | || || || ||||| || || ||||| Sbjct 8700 ATACGCGCAGCGAGGATGGCGTAGTCGGGATG 8731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622930100099360