Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548795.1_202016-02-04] 2,196 sequences; 42,458,485 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq1631 140 2e-28 seq1394 111 1e-19 seq1434 96.9 2e-15 seq1298 93.3 3e-14 seq2143 84.2 1e-11 >seq1631 Length=8428 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 5421 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 5362 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 5361 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 5327 >seq1394 Length=147340 Score = 111 bits (122), Expect = 1e-19 Identities = 199/289 (69%), Gaps = 4/289 (1%) Strand=Plus/Minus Query 6201 TTCTACCGCTACAAAATGCCGCGCATCTGCG--CCAAGGTCGAGGGTAAGGGAAACGGTA 6258 ||||| || ||||| ||| |||| |||| ||||| ||||||||||||| ||||| | Sbjct 92594 TTCTATCGTTACAAGATGGAGCGC--CTGCAGACCAAGATCGAGGGTAAGGGCAACGGAA 92537 Query 6259 TTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCACCT 6318 | || ||||| | |||||| | | |||||| || | |||| || |||| ||| Sbjct 92536 TCAAGACCGTTGTCGTCAACCTCACGAGCGTCGCTCAGTCTCTCGCTCGTCCTGGAGCCT 92477 Query 6319 ACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACG 6378 ||| | || || || || | || || || || ||||| | |||||| | ||| Sbjct 92476 ACCTTATCAAGTACTTTGGCTTTGAGCTCGGTGCCCAGACCAACATTGATCCCGCCGACG 92417 Query 6379 AGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCT 6438 | || | ||| | |||||| | || | |||| ||||| ||||||| || ||||| | Sbjct 92416 ACCGTTGGATCATCAACGGAGCTCACGATGCTGCAAAGCTTCAGGACTACCTCGACGGGT 92357 Query 6439 TTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487 | || ||||||||| || || | | ||| | ||||| ||||| || Sbjct 92356 TCATCAACAAGTTTGTTCTTTGCAAGAAGTGCAAGAACCCCGAGACAGA 92308 >seq1434 Length=58724 Score = 96.9 bits (106), Expect = 2e-15 Identities = 163/234 (70%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149 |||||| | || ||||| ||| | || || ||||||||||| || || ||||| || || Sbjct 22713 ACCACCACGCAGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGA 22772 Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209 || | |||| || | || || |||||||| || | ||| || || || | ||| Sbjct 22773 CAGGGTCCTGCCGTCCTCGAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGG 22832 Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTAT--CTCCACTTTCA 38267 || || || |||||| || || ||| ||||| | || |||| ||| || || Sbjct 22833 GATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTATCGCTCGAC--TCC 22890 Query 38268 ACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTTT 38321 || || | || ||||| || ||||| | ||| || ||||| ||||||||| || Sbjct 22891 ACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGATT 22944 >seq1298 Length=1581 Score = 93.3 bits (102), Expect = 3e-14 Identities = 62/69 (90%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 19954 TTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCGGTAATA 20013 |||||||| ||||||| ||||||||| |||||||||||||||||||||||| || | || Sbjct 1 TTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCTCGCCAGTA 60 Query 20014 TTTAGCCTT 20022 ||||||||| Sbjct 61 TTTAGCCTT 69 >seq2143 Length=14442 Score = 84.2 bits (92), Expect = 1e-11 Identities = 159/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||| || | || ||| | |||| || || || |||||||||||| ||||| || | Sbjct 10148 TACCTCCACGCAGACGGAGGACCAGGTGCAGCGTAGACTCCTTTTGAATGTTGTAGTCGG 10089 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 |||| || | || || || || ||||| || || || | || ||||| || | || Sbjct 10088 ACAACGTGCGCCCATCCTCCAACTGCTTTCCAGCGAAAATCAATCGCTGTTGGTCTGGGG 10029 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCT--CCACTTTC 38266 ||| ||||| ||||| ||| || || || || | || || ||| | || || Sbjct 10028 GGATTCCTTCCTTGTCTTGAATCTTGGATTTAACGTTGTCGATTGTGTCTGACGAC--TC 9971 Query 38267 AACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || || || || || || || |||||||| || || ||||| ||||||||| Sbjct 9970 TACCTCCAACGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCATG 9919 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334938235556876